RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 Q6ZQY7 126 aa9.25□□□□□ -0.93
USB1-211ENST00000565662 TMEM238LA0A1B0GVL6 79 aa9.23□□□□□ -0.93
USB1-211ENST00000565662 A6NJY4 79 aa9.23□□□□□ -0.93
USB1-211ENST00000565662 RAB37Q96AX2 223 aa9.23□□□□□ -0.93
USB1-211ENST00000565662 IGLV8-61A0A075B6I0 122 aa9.22□□□□□ -0.93
USB1-211ENST00000565662 CLEC2BQ92478 149 aa9.22□□□□□ -0.93
USB1-211ENST00000565662 VAMP8Q9BV40 100 aa9.22□□□□□ -0.93
USB1-211ENST00000565662 A0A0B4J2C4 111 aa9.21□□□□□ -0.94
USB1-211ENST00000565662 LCE2AQ5TA79 106 aaPredicted RBP9.21□□□□□ -0.94
USB1-211ENST00000565662 C12orf57Q99622 126 aa9.21□□□□□ -0.94
USB1-211ENST00000565662 H0YGX0 51 aa9.2□□□□□ -0.94
USB1-211ENST00000565662 SPATA45Q537H7 98 aa9.2□□□□□ -0.94
USB1-211ENST00000565662 C1orf195Q5TG92 126 aa9.18□□□□□ -0.94
USB1-211ENST00000565662 SNHG12Q9BXW3 62 aa9.18□□□□□ -0.94
USB1-211ENST00000565662 PAM16Q9Y3D7 125 aa9.18□□□□□ -0.94
USB1-211ENST00000565662 A0A1B0GX51 115 aa9.17□□□□□ -0.94
USB1-211ENST00000565662 C14orf144Q96I85 54 aa9.15□□□□□ -0.94
USB1-211ENST00000565662 CFC1BP0CG36 223 aa9.14□□□□□ -0.95
USB1-211ENST00000565662 CFC1P0CG37 223 aa9.14□□□□□ -0.95
USB1-211ENST00000565662 SS18L2Q9UHA2 77 aa9.14□□□□□ -0.95
USB1-211ENST00000565662 TRBV7-7A0A0K0K1E9 115 aa9.13□□□□□ -0.95
USB1-211ENST00000565662 C9orf92A6NGG3 77 aa9.13□□□□□ -0.95
USB1-211ENST00000565662 FAT4Q6V0I7 4981 aa9.13□□□□□ -0.95
USB1-211ENST00000565662 IGFL1Q6UW32 110 aa9.12□□□□□ -0.95
USB1-211ENST00000565662 CEND1Q8N111 149 aa9.12□□□□□ -0.95
USB1-211ENST00000565662 H3BQ85 93 aa9.11□□□□□ -0.95
USB1-211ENST00000565662 PRO1854Q9UHT4 67 aa9.1□□□□□ -0.95
USB1-211ENST00000565662 Q6Q795 121 aa9.09□□□□□ -0.95
USB1-211ENST00000565662 C2orf91Q6ZV80 131 aa9.08□□□□□ -0.96
USB1-211ENST00000565662 RPL37P61927 97 aaKnown RBP9.06□□□□□ -0.96
USB1-211ENST00000565662 PCOTHQ58A44 107 aa9.06□□□□□ -0.96
USB1-211ENST00000565662 A0A0G2JQZ4 141 aa9.05□□□□□ -0.96
USB1-211ENST00000565662 LST1O00453 97 aa9.05□□□□□ -0.96
USB1-211ENST00000565662 TEN1Q86WV5 123 aa9.05□□□□□ -0.96
USB1-211ENST00000565662 DNAL4O96015 105 aa9.04□□□□□ -0.96
USB1-211ENST00000565662 COX6CP09669 75 aa9.04□□□□□ -0.96
USB1-211ENST00000565662 HSD52Q0P140 79 aa9.04□□□□□ -0.96
USB1-211ENST00000565662 NDUFV3P56181 108 aaKnown RBP9.03□□□□□ -0.96
USB1-211ENST00000565662 KRTAP4-1Q9BYQ7 146 aa9.03□□□□□ -0.96
USB1-211ENST00000565662 H3BUT2 72 aa9□□□□□ -0.97
USB1-211ENST00000565662 FXYD2P54710 66 aa8.99□□□□□ -0.97
USB1-211ENST00000565662 H3BMG7 143 aa8.98□□□□□ -0.97
USB1-211ENST00000565662 FAM218AQ96MZ4 157 aa8.98□□□□□ -0.97
USB1-211ENST00000565662 TRIAP1O43715 76 aa8.97□□□□□ -0.97
USB1-211ENST00000565662 FABP2P12104 132 aa8.97□□□□□ -0.97
USB1-211ENST00000565662 PYY3Q5JQD4 70 aa8.97□□□□□ -0.97
USB1-211ENST00000565662 KRTAP9-2Q9BYQ4 174 aa8.97□□□□□ -0.97
USB1-211ENST00000565662 ORMDL1Q9P0S3 153 aa8.97□□□□□ -0.97
USB1-211ENST00000565662 UQCR10Q9UDW1 63 aa8.97□□□□□ -0.97
USB1-211ENST00000565662 TMEM256-PLSCR3K7ERE1 68 aa8.96□□□□□ -0.98
USB1-211ENST00000565662 PSMB2P49721 201 aa8.96□□□□□ -0.98
USB1-211ENST00000565662 Q75L30 129 aa8.96□□□□□ -0.98
USB1-211ENST00000565662 ATP11AUNQ6ZP68 121 aa8.94□□□□□ -0.98
USB1-211ENST00000565662 A0A087WSZ3 146 aa8.92□□□□□ -0.98
USB1-211ENST00000565662 OBSCN-AS1Q96MR7 158 aa8.92□□□□□ -0.98
USB1-211ENST00000565662 TRBV7-4A0A0J9YYF1 115 aa8.91□□□□□ -0.98
USB1-211ENST00000565662 C21orf62-AS1Q17RA5 79 aa8.9□□□□□ -0.98
USB1-211ENST00000565662 ANKRD29Q8N6D5 301 aa8.89□□□□□ -0.99
USB1-211ENST00000565662 TRACP01848 142 aa8.87□□□□□ -0.99
USB1-211ENST00000565662 UBE2V1Q13404 147 aa8.87□□□□□ -0.99
USB1-211ENST00000565662 COX6B2Q6YFQ2 88 aa8.87□□□□□ -0.99
USB1-211ENST00000565662 Q96NJ1 140 aa8.86□□□□□ -0.99
USB1-211ENST00000565662 LCE2CQ5TA81 110 aa8.85□□□□□ -0.99
USB1-211ENST00000565662 KRTAP19-2Q3LHN2 52 aa8.84□□□□□ -0.99
USB1-211ENST00000565662 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
USB1-211ENST00000565662 TMA7Q9Y2S6 64 aaKnown RBP8.84□□□□□ -0.99
USB1-211ENST00000565662 K7ERJ3 54 aa8.83□□□□□ -1
USB1-211ENST00000565662 SIGMAR1Q99720 223 aa8.83□□□□□ -1
USB1-211ENST00000565662 A0A1W2PNM2 257 aa8.82□□□□□ -1
USB1-211ENST00000565662 SCGB1C2P0DMR2 95 aa8.82□□□□□ -1
USB1-211ENST00000565662 M0R143 59 aa8.81□□□□□ -1
USB1-211ENST00000565662 MT1HP80294 61 aa8.81□□□□□ -1
USB1-211ENST00000565662 A8MUU9 505 aa8.8□□□□□ -1
USB1-211ENST00000565662 CCKP06307 115 aa8.8□□□□□ -1
USB1-211ENST00000565662 DSCR8Q96T75 97 aa8.79□□□□□ -1
USB1-211ENST00000565662 RBM3P98179 157 aaKnown RBP8.78□□□□□ -1
USB1-211ENST00000565662 LCE2DQ5TA82 110 aaPredicted RBP8.78□□□□□ -1
USB1-211ENST00000565662 IGKV4-1P06312 121 aa8.77□□□□□ -1.01
USB1-211ENST00000565662 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
USB1-211ENST00000565662 M0R2T5 61 aa8.76□□□□□ -1.01
USB1-211ENST00000565662 LINC00313P59037 77 aa8.76□□□□□ -1.01
USB1-211ENST00000565662 LYRM7Q5U5X0 104 aa8.75□□□□□ -1.01
USB1-211ENST00000565662 A0A1B0GW54 56 aa8.74□□□□□ -1.01
USB1-211ENST00000565662 J3KT08 172 aa8.72□□□□□ -1.01
USB1-211ENST00000565662 SMIM6P0DI80 62 aa8.72□□□□□ -1.01
USB1-211ENST00000565662 C9JAW5 83 aa8.71□□□□□ -1.02
USB1-211ENST00000565662 C8orf87E5RJ46 101 aa8.71□□□□□ -1.02
USB1-211ENST00000565662 JMJD7-PLA2G4BH0Y9G9 81 aa8.71□□□□□ -1.02
USB1-211ENST00000565662 ATXN8Q156A1 80 aa8.71□□□□□ -1.02
USB1-211ENST00000565662 LINC00472Q9H8W2 130 aa8.71□□□□□ -1.02
USB1-211ENST00000565662 A0A1B0GV72 72 aa8.7□□□□□ -1.02
USB1-211ENST00000565662 DSCR10P59022 87 aa8.7□□□□□ -1.02
USB1-211ENST00000565662 KRTAP9-6A0A140TA67 174 aa8.69□□□□□ -1.02
USB1-211ENST00000565662 BAALC-AS2P0C853 105 aa8.69□□□□□ -1.02
USB1-211ENST00000565662 PDE6GP18545 87 aa8.69□□□□□ -1.02
USB1-211ENST00000565662 VPS25Q9BRG1 176 aa8.69□□□□□ -1.02
USB1-211ENST00000565662 KRTAP10-6P60371 365 aaPredicted RBP8.66□□□□□ -1.02
USB1-211ENST00000565662 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
USB1-211ENST00000565662 IGHV6-1A0A0B4J1U7 121 aa8.64□□□□□ -1.03
USB1-211ENST00000565662 TSTD3H0UI37 97 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms