RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 CRCT1Q9UGL9 99 aa10.21□□□□□ -0.77
SYNGR3-204ENST00000564642 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
SYNGR3-204ENST00000564642 C2orf91Q6ZV80 131 aa10.2□□□□□ -0.78
SYNGR3-204ENST00000564642 A0A0G2JQZ4 141 aa10.19□□□□□ -0.78
SYNGR3-204ENST00000564642 A0A0B4J2C4 111 aa10.18□□□□□ -0.78
SYNGR3-204ENST00000564642 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.18□□□□□ -0.78
SYNGR3-204ENST00000564642 CEND1Q8N111 149 aa10.18□□□□□ -0.78
SYNGR3-204ENST00000564642 FSIP2Q5CZC0 6907 aa10.16□□□□□ -0.78
SYNGR3-204ENST00000564642 SNCGO76070 127 aa10.16□□□□□ -0.78
SYNGR3-204ENST00000564642 TMEM238LA0A1B0GVL6 79 aa10.15□□□□□ -0.78
SYNGR3-204ENST00000564642 A6NJY4 79 aa10.15□□□□□ -0.78
SYNGR3-204ENST00000564642 SEC61BP60468 96 aaKnown RBP10.15□□□□□ -0.78
SYNGR3-204ENST00000564642 ASB16-AS1Q495Z4 193 aa10.15□□□□□ -0.78
SYNGR3-204ENST00000564642 PYY3Q5JQD4 70 aa10.15□□□□□ -0.78
SYNGR3-204ENST00000564642 Q5XG85 94 aa10.15□□□□□ -0.78
SYNGR3-204ENST00000564642 TMA7Q9Y2S6 64 aaKnown RBP10.15□□□□□ -0.78
SYNGR3-204ENST00000564642 MUC17Q685J3 4493 aa10.13□□□□□ -0.79
SYNGR3-204ENST00000564642 H0YGX0 51 aa10.13□□□□□ -0.79
SYNGR3-204ENST00000564642 Q6JHZ5 121 aa10.13□□□□□ -0.79
SYNGR3-204ENST00000564642 PPDPFLQ8WWR9 84 aa10.13□□□□□ -0.79
SYNGR3-204ENST00000564642 SNHG12Q9BXW3 62 aa10.13□□□□□ -0.79
SYNGR3-204ENST00000564642 PRO1854Q9UHT4 67 aa10.12□□□□□ -0.79
SYNGR3-204ENST00000564642 TCL1BO95988 128 aa10.11□□□□□ -0.79
SYNGR3-204ENST00000564642 OCIAD2Q56VL3 154 aa10.11□□□□□ -0.79
SYNGR3-204ENST00000564642 XP32Q5T750 250 aa10.11□□□□□ -0.79
SYNGR3-204ENST00000564642 C1orf195Q5TG92 126 aa10.1□□□□□ -0.79
SYNGR3-204ENST00000564642 IGLV8-61A0A075B6I0 122 aa10.09□□□□□ -0.79
SYNGR3-204ENST00000564642 FXYD2P54710 66 aa10.09□□□□□ -0.79
SYNGR3-204ENST00000564642 C9orf92A6NGG3 77 aa10.08□□□□□ -0.8
SYNGR3-204ENST00000564642 IGFL1Q6UW32 110 aa10.08□□□□□ -0.8
SYNGR3-204ENST00000564642 CLEC2BQ92478 149 aa10.08□□□□□ -0.8
SYNGR3-204ENST00000564642 HSD52Q0P140 79 aa10.06□□□□□ -0.8
SYNGR3-204ENST00000564642 FAM218AQ96MZ4 157 aa10.06□□□□□ -0.8
SYNGR3-204ENST00000564642 TRBV7-7A0A0K0K1E9 115 aa10.03□□□□□ -0.8
SYNGR3-204ENST00000564642 A0A1B0GX51 115 aa10.03□□□□□ -0.8
SYNGR3-204ENST00000564642 GHRHP01286 108 aa10.03□□□□□ -0.8
SYNGR3-204ENST00000564642 H3BUT2 72 aa10.02□□□□□ -0.81
SYNGR3-204ENST00000564642 UQCR10Q9UDW1 63 aa10.02□□□□□ -0.81
SYNGR3-204ENST00000564642 TRIAP1O43715 76 aa10.01□□□□□ -0.81
SYNGR3-204ENST00000564642 PSMB2P49721 201 aa9.99□□□□□ -0.81
SYNGR3-204ENST00000564642 NDUFV3P56181 108 aaKnown RBP9.99□□□□□ -0.81
SYNGR3-204ENST00000564642 KRTAP4-1Q9BYQ7 146 aa9.98□□□□□ -0.81
SYNGR3-204ENST00000564642 FABP2P12104 132 aa9.97□□□□□ -0.81
SYNGR3-204ENST00000564642 K7ERJ3 54 aa9.96□□□□□ -0.82
SYNGR3-204ENST00000564642 COX6CP09669 75 aa9.96□□□□□ -0.82
SYNGR3-204ENST00000564642 LCE2DQ5TA82 110 aaPredicted RBP9.95□□□□□ -0.82
SYNGR3-204ENST00000564642 H3BMG7 143 aa9.94□□□□□ -0.82
SYNGR3-204ENST00000564642 DNAL4O96015 105 aa9.94□□□□□ -0.82
SYNGR3-204ENST00000564642 PCOTHQ58A44 107 aa9.94□□□□□ -0.82
SYNGR3-204ENST00000564642 LST1O00453 97 aa9.92□□□□□ -0.82
SYNGR3-204ENST00000564642 Q6Q795 121 aa9.92□□□□□ -0.82
SYNGR3-204ENST00000564642 TEN1Q86WV5 123 aa9.92□□□□□ -0.82
SYNGR3-204ENST00000564642 ORMDL1Q9P0S3 153 aa9.91□□□□□ -0.82
SYNGR3-204ENST00000564642 H3BQ85 93 aa9.9□□□□□ -0.82
SYNGR3-204ENST00000564642 SS18L2Q9UHA2 77 aa9.9□□□□□ -0.82
SYNGR3-204ENST00000564642 RPL37P61927 97 aaKnown RBP9.87□□□□□ -0.83
SYNGR3-204ENST00000564642 TMEM256-PLSCR3K7ERE1 68 aa9.86□□□□□ -0.83
SYNGR3-204ENST00000564642 A0A087WSZ3 146 aa9.85□□□□□ -0.83
SYNGR3-204ENST00000564642 SCGB1C2P0DMR2 95 aa9.85□□□□□ -0.83
SYNGR3-204ENST00000564642 ANKRD29Q8N6D5 301 aa9.84□□□□□ -0.83
SYNGR3-204ENST00000564642 A0A1B0GV72 72 aa9.81□□□□□ -0.84
SYNGR3-204ENST00000564642 A0A1W2PNM2 257 aa9.81□□□□□ -0.84
SYNGR3-204ENST00000564642 OBSCN-AS1Q96MR7 158 aa9.81□□□□□ -0.84
SYNGR3-204ENST00000564642 TRACP01848 142 aa9.8□□□□□ -0.84
SYNGR3-204ENST00000564642 KRTAP9-7A8MTY7 169 aa9.79□□□□□ -0.84
SYNGR3-204ENST00000564642 M0R143 59 aa9.78□□□□□ -0.84
SYNGR3-204ENST00000564642 UBE2V1Q13404 147 aa9.78□□□□□ -0.84
SYNGR3-204ENST00000564642 TRBV7-4A0A0J9YYF1 115 aa9.76□□□□□ -0.85
SYNGR3-204ENST00000564642 SMIM6P0DI80 62 aa9.76□□□□□ -0.85
SYNGR3-204ENST00000564642 Q96NJ1 140 aa9.75□□□□□ -0.85
SYNGR3-204ENST00000564642 ATP11AUNQ6ZP68 121 aa9.74□□□□□ -0.85
SYNGR3-204ENST00000564642 CCKP06307 115 aa9.73□□□□□ -0.85
SYNGR3-204ENST00000564642 Q75L30 129 aa9.73□□□□□ -0.85
SYNGR3-204ENST00000564642 BAALC-AS2P0C853 105 aa9.7□□□□□ -0.86
SYNGR3-204ENST00000564642 RBM3P98179 157 aaKnown RBP9.7□□□□□ -0.86
SYNGR3-204ENST00000564642 LCE2CQ5TA81 110 aa9.7□□□□□ -0.86
SYNGR3-204ENST00000564642 SIGMAR1Q99720 223 aa9.7□□□□□ -0.86
SYNGR3-204ENST00000564642 DSCR8Q96T75 97 aa9.69□□□□□ -0.86
SYNGR3-204ENST00000564642 IGKV4-1P06312 121 aa9.68□□□□□ -0.86
SYNGR3-204ENST00000564642 KRTAP19-2Q3LHN2 52 aa9.68□□□□□ -0.86
SYNGR3-204ENST00000564642 VPS25Q9BRG1 176 aa9.68□□□□□ -0.86
SYNGR3-204ENST00000564642 ATXN8Q156A1 80 aa9.67□□□□□ -0.86
SYNGR3-204ENST00000564642 NAA38Q9BRA0 125 aaKnown RBP9.67□□□□□ -0.86
SYNGR3-204ENST00000564642 TSTD3H0UI37 97 aa9.66□□□□□ -0.86
SYNGR3-204ENST00000564642 DSCR10P59022 87 aa9.65□□□□□ -0.86
SYNGR3-204ENST00000564642 C20orf166-AS1Q96NR2 134 aa9.64□□□□□ -0.87
SYNGR3-204ENST00000564642 C9JAW5 83 aa9.63□□□□□ -0.87
SYNGR3-204ENST00000564642 LINC00313P59037 77 aa9.63□□□□□ -0.87
SYNGR3-204ENST00000564642 DEFB116Q30KQ4 102 aa9.63□□□□□ -0.87
SYNGR3-204ENST00000564642 LINC00472Q9H8W2 130 aa9.62□□□□□ -0.87
SYNGR3-204ENST00000564642 A8MUU9 505 aa9.61□□□□□ -0.87
SYNGR3-204ENST00000564642 BATFQ16520 125 aa9.61□□□□□ -0.87
SYNGR3-204ENST00000564642 COX6B2Q6YFQ2 88 aa9.61□□□□□ -0.87
SYNGR3-204ENST00000564642 MT1HP80294 61 aa9.6□□□□□ -0.87
SYNGR3-204ENST00000564642 LYRM7Q5U5X0 104 aa9.6□□□□□ -0.87
SYNGR3-204ENST00000564642 LOC105371267A0A1B0GV96 52 aa9.58□□□□□ -0.88
SYNGR3-204ENST00000564642 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.58□□□□□ -0.88
SYNGR3-204ENST00000564642 JMJD7-PLA2G4BH0Y9G9 81 aa9.58□□□□□ -0.88
SYNGR3-204ENST00000564642 C21orf62-AS1Q17RA5 79 aa9.58□□□□□ -0.88
SYNGR3-204ENST00000564642 TRBV20-1A0A075B6N2 111 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms