RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 M0QY20 66 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 LECT2O14960 151 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 ERC2-IT1O76042 136 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 IGHV3-11P01762 117 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 UBE2BP63146 152 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 Q1T7F1 81 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 FAM74A4Q5TZK3 123 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 MIR7-3HGQ8N6C7 128 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 ZFAND2AQ8N6M9 145 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 SMIM11BQ8TCY0 68 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 USMG5Q96IX5 58 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 TM2D3Q9BRN9 247 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 RBM12B-AS1Q9P1G2 102 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 IGHV3-49A0A0A0MS15 119 aa2.21□□□□□ -2.06
CHD9-212ENST00000564641 LCE6AA0A183 80 aa2.21□□□□□ -2.06
CHD9-212ENST00000564641 UBE2L6O14933 153 aa2.21□□□□□ -2.06
CHD9-212ENST00000564641 SYCNQ0VAF6 134 aa2.21□□□□□ -2.06
CHD9-212ENST00000564641 NREPQ16612 68 aa2.21□□□□□ -2.06
CHD9-212ENST00000564641 Q5W150 140 aa2.21□□□□□ -2.06
CHD9-212ENST00000564641 KTN1-AS1Q86SY8 53 aa2.21□□□□□ -2.06
CHD9-212ENST00000564641 SND1-IT1Q9HBX3 110 aa2.21□□□□□ -2.06
CHD9-212ENST00000564641 CDKN2A-AS1Q9UH64 79 aa2.21□□□□□ -2.06
CHD9-212ENST00000564641 IGHV6-1A0A0B4J1U7 121 aa2.2□□□□□ -2.06
CHD9-212ENST00000564641 IGKV2-29A2NJV5 120 aaPredicted RBP2.2□□□□□ -2.06
CHD9-212ENST00000564641 NUPR2A6NF83 97 aa2.2□□□□□ -2.06
CHD9-212ENST00000564641 CMC4P56277 68 aaPredicted RBP2.2□□□□□ -2.06
CHD9-212ENST00000564641 LINC00158P58513 81 aa2.2□□□□□ -2.06
CHD9-212ENST00000564641 DEFB136Q30KP8 78 aa2.2□□□□□ -2.06
CHD9-212ENST00000564641 DEFB116Q30KQ4 102 aa2.2□□□□□ -2.06
CHD9-212ENST00000564641 C6orf99Q4VX62 202 aa2.2□□□□□ -2.06
CHD9-212ENST00000564641 RNASE13Q5GAN3 156 aaKnown RBP2.2□□□□□ -2.06
CHD9-212ENST00000564641 CLEC19AQ6UXS0 136 aa2.2□□□□□ -2.06
CHD9-212ENST00000564641 UNQ9165/PRO28630Q6UXU0 137 aa2.2□□□□□ -2.06
CHD9-212ENST00000564641 Q8N6K4 173 aa2.2□□□□□ -2.06
CHD9-212ENST00000564641 TMEM254Q8TBM7 123 aa2.2□□□□□ -2.06
CHD9-212ENST00000564641 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.19□□□□□ -2.06
CHD9-212ENST00000564641 TRBV7-4A0A0J9YYF1 115 aa2.19□□□□□ -2.06
CHD9-212ENST00000564641 TRBV10-1A0A0K0K1A3 114 aa2.19□□□□□ -2.06
CHD9-212ENST00000564641 hDV103S1A0JD37 113 aa2.19□□□□□ -2.06
CHD9-212ENST00000564641 H3BQ85 93 aa2.19□□□□□ -2.06
CHD9-212ENST00000564641 M0R378 163 aa2.19□□□□□ -2.06
CHD9-212ENST00000564641 IGLV1-51P01701 117 aa2.19□□□□□ -2.06
CHD9-212ENST00000564641 PDE6GP18545 87 aa2.19□□□□□ -2.06
CHD9-212ENST00000564641 COX6A2Q02221 97 aa2.19□□□□□ -2.06
CHD9-212ENST00000564641 CHCHD7Q9BUK0 85 aa2.19□□□□□ -2.06
CHD9-212ENST00000564641 C8orf17Q9NRJ1 99 aa2.19□□□□□ -2.06
CHD9-212ENST00000564641 LINC00588Q9Y4M8 146 aa2.19□□□□□ -2.06
CHD9-212ENST00000564641 DNAH9Q9NYC9 4486 aa2.19□□□□□ -2.06
CHD9-212ENST00000564641 DNAH3Q8TD57 4116 aa2.19□□□□□ -2.06
CHD9-212ENST00000564641 MOBPQ13875 183 aa2.18□□□□□ -2.06
CHD9-212ENST00000564641 C10orf99Q6UWK7 81 aa2.18□□□□□ -2.06
CHD9-212ENST00000564641 Q6ZQT0 140 aa2.18□□□□□ -2.06
CHD9-212ENST00000564641 Q6ZTI0 123 aa2.18□□□□□ -2.06
CHD9-212ENST00000564641 FAM19A3Q7Z5A8 133 aa2.18□□□□□ -2.06
CHD9-212ENST00000564641 LINC00269Q8N2A0 174 aa2.18□□□□□ -2.06
CHD9-212ENST00000564641 LINC00337Q8N6G1 96 aa2.18□□□□□ -2.06
CHD9-212ENST00000564641 Q8N814 137 aa2.18□□□□□ -2.06
CHD9-212ENST00000564641 COX7B2Q8TF08 81 aa2.18□□□□□ -2.06
CHD9-212ENST00000564641 TENM2Q9NT68 2774 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 HUWE1Q7Z6Z7 4374 aaKnown RBP2.17□□□□□ -2.06
CHD9-212ENST00000564641 LOC110117498A0A087WWA1 95 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 IGHV3-73A0A0B4J1V6 119 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 TRAV22A0A0B4J277 110 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 TRBV6-4A0A1B0GX49 114 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 G3V318 75 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 ZNF73O43830 326 aaPredicted RBP2.17□□□□□ -2.06
CHD9-212ENST00000564641 CCL18P55774 89 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 DEFB1P60022 68 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 KLK9Q2XQG4 91 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 ATP11AUNQ6ZP68 121 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 LCA10Q71F78 164 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 SPTSSBQ8NFR3 76 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 LINC00467Q9BRT7 94 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 HIGD2AQ9BW72 106 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 KLK9Q9UKQ9 250 aa2.17□□□□□ -2.06
CHD9-212ENST00000564641 IGKV3-7A0A075B6H7 116 aa2.16□□□□□ -2.06
CHD9-212ENST00000564641 TRBV6-8A0A0A6YYG3 113 aa2.16□□□□□ -2.06
CHD9-212ENST00000564641 A8MUN3 132 aa2.16□□□□□ -2.06
CHD9-212ENST00000564641 CHKB-CPT1BH3BT56 60 aa2.16□□□□□ -2.06
CHD9-212ENST00000564641 NDUFA4O00483 81 aa2.16□□□□□ -2.06
CHD9-212ENST00000564641 LY6G6CO95867 125 aa2.16□□□□□ -2.06
CHD9-212ENST00000564641 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
CHD9-212ENST00000564641 PHF5AQ7RTV0 110 aaKnown RBP2.16□□□□□ -2.06
CHD9-212ENST00000564641 C1orf64Q8NEQ6 169 aa2.16□□□□□ -2.06
CHD9-212ENST00000564641 TOMM7Q9P0U1 55 aa2.16□□□□□ -2.06
CHD9-212ENST00000564641 HCG22E2RYF7 251 aa2.15□□□□□ -2.07
CHD9-212ENST00000564641 C8orf87E5RJ46 101 aa2.15□□□□□ -2.07
CHD9-212ENST00000564641 PSCAO43653 123 aa2.15□□□□□ -2.07
CHD9-212ENST00000564641 SCXQ7RTU7 201 aa2.15□□□□□ -2.07
CHD9-212ENST00000564641 LIMD2Q9BT23 127 aa2.15□□□□□ -2.07
CHD9-212ENST00000564641 RHPN1-AS1Q9BWJ2 59 aa2.15□□□□□ -2.07
CHD9-212ENST00000564641 CYP4F30PQ9H0H9 118 aa2.15□□□□□ -2.07
CHD9-212ENST00000564641 LYSTQ99698 3801 aa2.14□□□□□ -2.07
CHD9-212ENST00000564641 M0R2N4 97 aa2.14□□□□□ -2.07
CHD9-212ENST00000564641 DEFB114Q30KQ6 69 aa2.14□□□□□ -2.07
CHD9-212ENST00000564641 LINC00575Q6W349 94 aa2.14□□□□□ -2.07
CHD9-212ENST00000564641 C7orf65Q6ZTY9 151 aa2.14□□□□□ -2.07
CHD9-212ENST00000564641 SPANXA2-OT1Q8N9U9 137 aa2.14□□□□□ -2.07
CHD9-212ENST00000564641 CIRBP-AS1Q8TBR5 109 aa2.14□□□□□ -2.07
CHD9-212ENST00000564641 CDC42SE2Q9NRR3 84 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms