RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 TRAV13-2A0A0B4J235 113 aa7.52□□□□□ -1.2
KARS-204ENST00000564578 CFC1BP0CG36 223 aa7.52□□□□□ -1.2
KARS-204ENST00000564578 CFC1P0CG37 223 aa7.52□□□□□ -1.2
KARS-204ENST00000564578 FXYD2P54710 66 aa7.52□□□□□ -1.2
KARS-204ENST00000564578 LYRM7Q5U5X0 104 aa7.52□□□□□ -1.2
KARS-204ENST00000564578 TRACP01848 142 aa7.52□□□□□ -1.21
KARS-204ENST00000564578 DIRC1Q969H9 104 aa7.52□□□□□ -1.21
KARS-204ENST00000564578 COX7CP15954 63 aa7.51□□□□□ -1.21
KARS-204ENST00000564578 ETDCA0A1B0GVM5 59 aa7.5□□□□□ -1.21
KARS-204ENST00000564578 C6orf99Q4VX62 202 aa7.5□□□□□ -1.21
KARS-204ENST00000564578 Q6ZRX8 168 aa7.5□□□□□ -1.21
KARS-204ENST00000564578 SMIM11BQ8TCY0 68 aa7.5□□□□□ -1.21
KARS-204ENST00000564578 FAT3Q8TDW7 4589 aa7.49□□□□□ -1.21
KARS-204ENST00000564578 KRTAP1-4P0C5Y4 121 aa7.49□□□□□ -1.21
KARS-204ENST00000564578 RPL13AP40429 203 aaKnown RBP7.49□□□□□ -1.21
KARS-204ENST00000564578 SMCR5Q8TEV8 140 aa7.49□□□□□ -1.21
KARS-204ENST00000564578 Q9BRP9 147 aa7.49□□□□□ -1.21
KARS-204ENST00000564578 HIGD2AQ9BW72 106 aa7.49□□□□□ -1.21
KARS-204ENST00000564578 A0A0B4J2C4 111 aa7.48□□□□□ -1.21
KARS-204ENST00000564578 KRTAP29-1A8MX34 341 aaPredicted RBP7.46□□□□□ -1.21
KARS-204ENST00000564578 ERC2-IT1O76042 136 aa7.46□□□□□ -1.21
KARS-204ENST00000564578 LINC01600Q96MT4 127 aa7.46□□□□□ -1.21
KARS-204ENST00000564578 DMBT1Q9UGM3 2413 aaPredicted RBP7.46□□□□□ -1.21
KARS-204ENST00000564578 ELOF1P60002 83 aaKnown RBP7.46□□□□□ -1.22
KARS-204ENST00000564578 TRBV7-6A0A0J9YX20 115 aa7.44□□□□□ -1.22
KARS-204ENST00000564578 MT1HL1P0DM35 61 aa7.44□□□□□ -1.22
KARS-204ENST00000564578 NHP2Q9NX24 153 aaKnown RBP7.44□□□□□ -1.22
KARS-204ENST00000564578 A0A0U1RQV1 116 aa7.44□□□□□ -1.22
KARS-204ENST00000564578 H3BS24 57 aa7.44□□□□□ -1.22
KARS-204ENST00000564578 COX7BP24311 80 aa7.44□□□□□ -1.22
KARS-204ENST00000564578 ANAPC11Q9NYG5 84 aa7.44□□□□□ -1.22
KARS-204ENST00000564578 PRO1854Q9UHT4 67 aa7.44□□□□□ -1.22
KARS-204ENST00000564578 H7C2G1 150 aa7.43□□□□□ -1.22
KARS-204ENST00000564578 K7ERJ3 54 aa7.43□□□□□ -1.22
KARS-204ENST00000564578 TNXBP22105 4242 aa7.43□□□□□ -1.22
KARS-204ENST00000564578 SCGB1C2P0DMR2 95 aa7.42□□□□□ -1.22
KARS-204ENST00000564578 DSCR8Q96T75 97 aa7.42□□□□□ -1.22
KARS-204ENST00000564578 A0A087X002 238 aa7.41□□□□□ -1.22
KARS-204ENST00000564578 TCL1BO95988 128 aa7.41□□□□□ -1.22
KARS-204ENST00000564578 KRTAP10-8P60410 259 aa7.41□□□□□ -1.22
KARS-204ENST00000564578 PRR26Q8N8Z3 221 aa7.41□□□□□ -1.22
KARS-204ENST00000564578 SPRR4Q96PI1 79 aa7.41□□□□□ -1.22
KARS-204ENST00000564578 DHRS4-AS1Q9P1J3 65 aa7.4□□□□□ -1.22
KARS-204ENST00000564578 FAM240AA0A1B0GVK7 77 aa7.4□□□□□ -1.23
KARS-204ENST00000564578 ST20-AS1Q8NBB2 130 aa7.39□□□□□ -1.23
KARS-204ENST00000564578 hADV29S1A0JD25 119 aa7.39□□□□□ -1.23
KARS-204ENST00000564578 LINC00575Q6W349 94 aa7.38□□□□□ -1.23
KARS-204ENST00000564578 BRK1Q8WUW1 75 aa7.38□□□□□ -1.23
KARS-204ENST00000564578 LAMTOR3Q9UHA4 124 aa7.38□□□□□ -1.23
KARS-204ENST00000564578 SMIM26A0A096LP01 95 aa7.37□□□□□ -1.23
KARS-204ENST00000564578 KRTAP13-2Q52LG2 175 aa7.37□□□□□ -1.23
KARS-204ENST00000564578 LINC00483Q53H64 154 aa7.37□□□□□ -1.23
KARS-204ENST00000564578 ZNF706Q9Y5V0 76 aaPredicted RBP7.37□□□□□ -1.23
KARS-204ENST00000564578 SERP1Q9Y6X1 66 aa7.37□□□□□ -1.23
KARS-204ENST00000564578 HERC1Q15751 4861 aa7.37□□□□□ -1.23
KARS-204ENST00000564578 J3QL48 77 aa7.37□□□□□ -1.23
KARS-204ENST00000564578 Q1RN00 199 aa7.37□□□□□ -1.23
KARS-204ENST00000564578 FAM229BQ4G0N7 80 aa7.37□□□□□ -1.23
KARS-204ENST00000564578 PRR15Q8IV56 129 aa7.37□□□□□ -1.23
KARS-204ENST00000564578 H3BT86 120 aa7.36□□□□□ -1.23
KARS-204ENST00000564578 TRIAP1O43715 76 aa7.36□□□□□ -1.23
KARS-204ENST00000564578 ATOX1O00244 68 aa7.35□□□□□ -1.23
KARS-204ENST00000564578 FAM218AQ96MZ4 157 aa7.35□□□□□ -1.23
KARS-204ENST00000564578 LINC01547P58512 204 aaPredicted RBP7.34□□□□□ -1.23
KARS-204ENST00000564578 HIST1H4AP62805 103 aaKnown RBP7.34□□□□□ -1.23
KARS-204ENST00000564578 H0YGX0 51 aa7.33□□□□□ -1.24
KARS-204ENST00000564578 SPRR1BP22528 89 aa7.33□□□□□ -1.24
KARS-204ENST00000564578 PSMB2P49721 201 aa7.33□□□□□ -1.24
KARS-204ENST00000564578 CYSTM1Q9H1C7 97 aa7.33□□□□□ -1.24
KARS-204ENST00000564578 IGLV5-48A0A075B6I7 105 aa7.32□□□□□ -1.24
KARS-204ENST00000564578 SLC25A20O43772 301 aa7.32□□□□□ -1.24
KARS-204ENST00000564578 DEFB105AQ8NG35 78 aa7.31□□□□□ -1.24
KARS-204ENST00000564578 Q6ZQY7 126 aa7.31□□□□□ -1.24
KARS-204ENST00000564578 TYMSOSQ8TAI1 123 aa7.31□□□□□ -1.24
KARS-204ENST00000564578 FP248Q71RG6 208 aaPredicted RBP7.3□□□□□ -1.24
KARS-204ENST00000564578 Q8N377 158 aa7.3□□□□□ -1.24
KARS-204ENST00000564578 CLEC2BQ92478 149 aa7.3□□□□□ -1.24
KARS-204ENST00000564578 TEX49A0A1B0GTD5 131 aa7.29□□□□□ -1.24
KARS-204ENST00000564578 SMIM29Q86T20 159 aa7.29□□□□□ -1.24
KARS-204ENST00000564578 ACYP1P07311 99 aa7.28□□□□□ -1.24
KARS-204ENST00000564578 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.28□□□□□ -1.24
KARS-204ENST00000564578 SERP2Q8N6R1 65 aa7.28□□□□□ -1.24
KARS-204ENST00000564578 RBM12B-AS1Q9P1G2 102 aa7.28□□□□□ -1.24
KARS-204ENST00000564578 IGLV9-49A0A0B4J1Y8 123 aa7.27□□□□□ -1.25
KARS-204ENST00000564578 COX6CP09669 75 aa7.27□□□□□ -1.25
KARS-204ENST00000564578 MOBPQ13875 183 aa7.26□□□□□ -1.25
KARS-204ENST00000564578 LINC00643Q86TS7 51 aa7.25□□□□□ -1.25
KARS-204ENST00000564578 SSBP3-AS1Q7Z2R9 100 aa7.23□□□□□ -1.25
KARS-204ENST00000564578 Q8NBF4 154 aa7.23□□□□□ -1.25
KARS-204ENST00000564578 LST1O00453 97 aa7.22□□□□□ -1.25
KARS-204ENST00000564578 LINC00304Q8N9R0 145 aa7.22□□□□□ -1.25
KARS-204ENST00000564578 C8orf87E5RJ46 101 aa7.19□□□□□ -1.26
KARS-204ENST00000564578 DNAL4O96015 105 aa7.19□□□□□ -1.26
KARS-204ENST00000564578 A0A0G2JQZ4 141 aa7.18□□□□□ -1.26
KARS-204ENST00000564578 IGLV8-61A0A075B6I0 122 aa7.17□□□□□ -1.26
KARS-204ENST00000564578 SPAG11AQ6PDA7 123 aa7.17□□□□□ -1.26
KARS-204ENST00000564578 ORMDL1Q9P0S3 153 aa7.17□□□□□ -1.26
KARS-204ENST00000564578 KTN1-AS1Q86SY8 53 aa7.16□□□□□ -1.26
KARS-204ENST00000564578 ATXN8Q156A1 80 aa7.15□□□□□ -1.26
KARS-204ENST00000564578 SPINK1P00995 79 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms