RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 DEFB105AQ8NG35 78 aa6.17□□□□□ -1.42
SMG1-208ENST00000563448 Q8N377 158 aa6.16□□□□□ -1.42
SMG1-208ENST00000563448 IGLV5-48A0A075B6I7 105 aa6.16□□□□□ -1.42
SMG1-208ENST00000563448 TMEM256-PLSCR3K7ERE1 68 aa6.16□□□□□ -1.42
SMG1-208ENST00000563448 RYR1P21817 5038 aa6.15□□□□□ -1.42
SMG1-208ENST00000563448 KRTAP10-4P60372 401 aaPredicted RBP6.15□□□□□ -1.43
SMG1-208ENST00000563448 TRBV7-7A0A0K0K1E9 115 aa6.14□□□□□ -1.43
SMG1-208ENST00000563448 H3BQ85 93 aa6.14□□□□□ -1.43
SMG1-208ENST00000563448 SRRM2Q9UQ35 2752 aaKnown RBP6.14□□□□□ -1.43
SMG1-208ENST00000563448 TEX49A0A1B0GTD5 131 aa6.13□□□□□ -1.43
SMG1-208ENST00000563448 GHRHP01286 108 aa6.13□□□□□ -1.43
SMG1-208ENST00000563448 SPRR4Q96PI1 79 aa6.13□□□□□ -1.43
SMG1-208ENST00000563448 SPRR1BP22528 89 aa6.13□□□□□ -1.43
SMG1-208ENST00000563448 GAGE2AQ6NT46 116 aa6.13□□□□□ -1.43
SMG1-208ENST00000563448 SMIM29Q86T20 159 aa6.13□□□□□ -1.43
SMG1-208ENST00000563448 C3orf22Q8N5N4 141 aa6.13□□□□□ -1.43
SMG1-208ENST00000563448 HSPG2P98160 4391 aa6.11□□□□□ -1.43
SMG1-208ENST00000563448 SMIM20Q8N5G0 67 aa6.11□□□□□ -1.43
SMG1-208ENST00000563448 KRTAP17-1Q9BYP8 105 aa6.11□□□□□ -1.43
SMG1-208ENST00000563448 LAMTOR3Q9UHA4 124 aa6.11□□□□□ -1.43
SMG1-208ENST00000563448 ZNF706Q9Y5V0 76 aaPredicted RBP6.11□□□□□ -1.43
SMG1-208ENST00000563448 CCDC179H3BU77 68 aa6.1□□□□□ -1.43
SMG1-208ENST00000563448 LINC00483Q53H64 154 aa6.1□□□□□ -1.43
SMG1-208ENST00000563448 FAT1Q14517 4588 aa6.1□□□□□ -1.43
SMG1-208ENST00000563448 FAM229AH3BQW9 127 aa6.09□□□□□ -1.43
SMG1-208ENST00000563448 SPINK6Q6UWN8 80 aa6.09□□□□□ -1.43
SMG1-208ENST00000563448 OBSCN-AS1Q96MR7 158 aa6.09□□□□□ -1.43
SMG1-208ENST00000563448 KIAA1109Q2LD37 5005 aa6.09□□□□□ -1.43
SMG1-208ENST00000563448 ANAPC11Q9NYG5 84 aa6.09□□□□□ -1.43
SMG1-208ENST00000563448 PKHD1L1Q86WI1 4243 aa6.09□□□□□ -1.44
SMG1-208ENST00000563448 PLA2G1BP04054 148 aaKnown RBP6.08□□□□□ -1.44
SMG1-208ENST00000563448 Q5VSD8 79 aa6.08□□□□□ -1.44
SMG1-208ENST00000563448 JMJD7-PLA2G4BH0Y9G9 81 aa6.08□□□□□ -1.44
SMG1-208ENST00000563448 LINC00643Q86TS7 51 aa6.08□□□□□ -1.44
SMG1-208ENST00000563448 KRTAP1-4P0C5Y4 121 aa6.06□□□□□ -1.44
SMG1-208ENST00000563448 RBM3P98179 157 aaKnown RBP6.06□□□□□ -1.44
SMG1-208ENST00000563448 C14orf132Q9NPU4 83 aa6.06□□□□□ -1.44
SMG1-208ENST00000563448 UQCRQO14949 82 aa6.06□□□□□ -1.44
SMG1-208ENST00000563448 Q8N1X5 172 aa6.05□□□□□ -1.44
SMG1-208ENST00000563448 IGLV8-61A0A075B6I0 122 aa6.04□□□□□ -1.44
SMG1-208ENST00000563448 F8WEM9 126 aa6.04□□□□□ -1.44
SMG1-208ENST00000563448 HERC2O95714 4834 aa6.04□□□□□ -1.44
SMG1-208ENST00000563448 IGLV9-49A0A0B4J1Y8 123 aa6.04□□□□□ -1.44
SMG1-208ENST00000563448 TRBV7-4A0A0J9YYF1 115 aa6.04□□□□□ -1.44
SMG1-208ENST00000563448 A0A087X002 238 aa6.03□□□□□ -1.44
SMG1-208ENST00000563448 DSCR8Q96T75 97 aa6.03□□□□□ -1.44
SMG1-208ENST00000563448 LOC110117498A0A087WWA1 95 aa6.02□□□□□ -1.45
SMG1-208ENST00000563448 A0A0G2JQZ4 141 aa6.02□□□□□ -1.45
SMG1-208ENST00000563448 RPS28P62857 69 aaKnown RBP6.02□□□□□ -1.45
SMG1-208ENST00000563448 FAM229BQ4G0N7 80 aa6.02□□□□□ -1.45
SMG1-208ENST00000563448 Q6ZQT0 140 aa6.02□□□□□ -1.45
SMG1-208ENST00000563448 FAM236AA0A1B0GUQ0 79 aa6.01□□□□□ -1.45
SMG1-208ENST00000563448 FAM236BA0A1B0GV22 79 aa6.01□□□□□ -1.45
SMG1-208ENST00000563448 KRTAP13-2Q52LG2 175 aa6.01□□□□□ -1.45
SMG1-208ENST00000563448 C9orf153Q5TBE3 101 aa6.01□□□□□ -1.45
SMG1-208ENST00000563448 IGFL1Q6UW32 110 aa6.01□□□□□ -1.45
SMG1-208ENST00000563448 ATOX1O00244 68 aa6.01□□□□□ -1.45
SMG1-208ENST00000563448 MOBPQ13875 183 aa6.01□□□□□ -1.45
SMG1-208ENST00000563448 Q8NBF4 154 aa6□□□□□ -1.45
SMG1-208ENST00000563448 CCKP06307 115 aa5.99□□□□□ -1.45
SMG1-208ENST00000563448 C5orf47Q569G3 176 aa5.99□□□□□ -1.45
SMG1-208ENST00000563448 J3KT08 172 aa5.99□□□□□ -1.45
SMG1-208ENST00000563448 CRYGAP11844 174 aa5.99□□□□□ -1.45
SMG1-208ENST00000563448 COX7CP15954 63 aa5.99□□□□□ -1.45
SMG1-208ENST00000563448 PDE6GP18545 87 aa5.99□□□□□ -1.45
SMG1-208ENST00000563448 Q6JHZ5 121 aa5.99□□□□□ -1.45
SMG1-208ENST00000563448 A0A1W2PNM2 257 aa5.98□□□□□ -1.45
SMG1-208ENST00000563448 SSBP3-AS1Q7Z2R9 100 aa5.97□□□□□ -1.45
SMG1-208ENST00000563448 PRR26Q8N8Z3 221 aa5.97□□□□□ -1.45
SMG1-208ENST00000563448 HIST1H4AP62805 103 aaKnown RBP5.96□□□□□ -1.45
SMG1-208ENST00000563448 KRTAP4-5Q9BYR2 181 aa5.96□□□□□ -1.45
SMG1-208ENST00000563448 TMEM258P61165 79 aa5.94□□□□□ -1.46
SMG1-208ENST00000563448 TYMSOSQ8TAI1 123 aa5.94□□□□□ -1.46
SMG1-208ENST00000563448 PCLOQ9Y6V0 5065 aa5.94□□□□□ -1.46
SMG1-208ENST00000563448 HRCT1Q6UXD1 115 aa5.93□□□□□ -1.46
SMG1-208ENST00000563448 LINC00846Q9NV44 126 aa5.92□□□□□ -1.46
SMG1-208ENST00000563448 ATP5EP2Q5VTU8 51 aa5.91□□□□□ -1.46
SMG1-208ENST00000563448 SERP2Q8N6R1 65 aa5.91□□□□□ -1.46
SMG1-208ENST00000563448 FAT3Q8TDW7 4589 aa5.91□□□□□ -1.46
SMG1-208ENST00000563448 A0A1B0GW54 56 aa5.91□□□□□ -1.46
SMG1-208ENST00000563448 CD164Q04900 197 aa5.9□□□□□ -1.47
SMG1-208ENST00000563448 LRP1Q07954 4544 aaKnown RBP5.9□□□□□ -1.47
SMG1-208ENST00000563448 A0A087WSZ3 146 aa5.89□□□□□ -1.47
SMG1-208ENST00000563448 FLG2Q5D862 2391 aaPredicted RBP5.89□□□□□ -1.47
SMG1-208ENST00000563448 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
SMG1-208ENST00000563448 LINC00304Q8N9R0 145 aa5.87□□□□□ -1.47
SMG1-208ENST00000563448 TNXBP22105 4242 aa5.87□□□□□ -1.47
SMG1-208ENST00000563448 Q6ZVQ6 151 aa5.86□□□□□ -1.47
SMG1-208ENST00000563448 C4orf48Q5BLP8 95 aa5.86□□□□□ -1.47
SMG1-208ENST00000563448 UBL5Q9BZL1 73 aa5.86□□□□□ -1.47
SMG1-208ENST00000563448 ABCA13Q86UQ4 5058 aa5.85□□□□□ -1.47
SMG1-208ENST00000563448 NREPQ16612 68 aa5.85□□□□□ -1.47
SMG1-208ENST00000563448 SPINK1P00995 79 aa5.84□□□□□ -1.47
SMG1-208ENST00000563448 MT1HL1P0DM35 61 aa5.84□□□□□ -1.47
SMG1-208ENST00000563448 OXTP01178 125 aa5.84□□□□□ -1.48
SMG1-208ENST00000563448 SPAG11AQ6PDA7 123 aa5.84□□□□□ -1.48
SMG1-208ENST00000563448 Q5XG85 94 aa5.82□□□□□ -1.48
SMG1-208ENST00000563448 Q96NJ1 140 aa5.82□□□□□ -1.48
SMG1-208ENST00000563448 LINC00472Q9H8W2 130 aa5.82□□□□□ -1.48
SMG1-208ENST00000563448 MYCBP2O75592 4640 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms