RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 CFC1BP0CG36 223 aa9.29□□□□□ -0.92
TSC2-219ENST00000563346 RPL37P61927 97 aaKnown RBP9.28□□□□□ -0.92
TSC2-219ENST00000563346 VAMP3Q15836 100 aa9.28□□□□□ -0.92
TSC2-219ENST00000563346 SNRPEP62304 92 aaKnown RBP9.26□□□□□ -0.93
TSC2-219ENST00000563346 LINC00575Q6W349 94 aa9.22□□□□□ -0.93
TSC2-219ENST00000563346 COX6B2Q6YFQ2 88 aa9.22□□□□□ -0.93
TSC2-219ENST00000563346 Q6ZQY7 126 aa9.21□□□□□ -0.94
TSC2-219ENST00000563346 hADV29S1A0JD25 119 aa9.2□□□□□ -0.94
TSC2-219ENST00000563346 M0R2T5 61 aa9.2□□□□□ -0.94
TSC2-219ENST00000563346 Q6JHZ5 121 aa9.2□□□□□ -0.94
TSC2-219ENST00000563346 HSBP1L1C9JCN9 74 aa9.19□□□□□ -0.94
TSC2-219ENST00000563346 CLEC2BQ92478 149 aa9.18□□□□□ -0.94
TSC2-219ENST00000563346 S100A2P29034 98 aa9.17□□□□□ -0.94
TSC2-219ENST00000563346 TRBV7-7A0A0K0K1E9 115 aa9.16□□□□□ -0.94
TSC2-219ENST00000563346 KRTAP10-6P60371 365 aaPredicted RBP9.16□□□□□ -0.94
TSC2-219ENST00000563346 IGFL1Q6UW32 110 aa9.16□□□□□ -0.94
TSC2-219ENST00000563346 OCIAD2Q56VL3 154 aa9.15□□□□□ -0.94
TSC2-219ENST00000563346 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.13□□□□□ -0.95
TSC2-219ENST00000563346 HIST3H2BBQ8N257 126 aa9.13□□□□□ -0.95
TSC2-219ENST00000563346 HIST1H2BLQ99880 126 aa9.12□□□□□ -0.95
TSC2-219ENST00000563346 BVES-AS1Q5T3Y7 98 aa9.11□□□□□ -0.95
TSC2-219ENST00000563346 OBSCN-AS1Q96MR7 158 aa9.11□□□□□ -0.95
TSC2-219ENST00000563346 C12orf57Q99622 126 aa9.11□□□□□ -0.95
TSC2-219ENST00000563346 SNHG12Q9BXW3 62 aa9.11□□□□□ -0.95
TSC2-219ENST00000563346 ATP11AUNQ6ZP68 121 aa9.1□□□□□ -0.95
TSC2-219ENST00000563346 PPDPFLQ8WWR9 84 aa9.1□□□□□ -0.95
TSC2-219ENST00000563346 HIST1H4GQ99525 98 aa9.09□□□□□ -0.95
TSC2-219ENST00000563346 LST1O00453 97 aa9.07□□□□□ -0.96
TSC2-219ENST00000563346 SCGB1D1O95968 90 aa9.07□□□□□ -0.96
TSC2-219ENST00000563346 Q75L30 129 aa9.07□□□□□ -0.96
TSC2-219ENST00000563346 H3BUT2 72 aa9.06□□□□□ -0.96
TSC2-219ENST00000563346 Q6Q795 121 aa9.06□□□□□ -0.96
TSC2-219ENST00000563346 S100A6P06703 90 aa9.05□□□□□ -0.96
TSC2-219ENST00000563346 SNCGO76070 127 aa9.03□□□□□ -0.96
TSC2-219ENST00000563346 Q96NJ1 140 aa9.02□□□□□ -0.97
TSC2-219ENST00000563346 SS18L2Q9UHA2 77 aa9.02□□□□□ -0.97
TSC2-219ENST00000563346 FLGP20930 4061 aaPredicted RBP9.01□□□□□ -0.97
TSC2-219ENST00000563346 KRTAP9-7A8MTY7 169 aa9.01□□□□□ -0.97
TSC2-219ENST00000563346 COX8AP10176 69 aa9□□□□□ -0.97
TSC2-219ENST00000563346 RAB37Q96AX2 223 aa9□□□□□ -0.97
TSC2-219ENST00000563346 CFC1P0CG37 223 aa8.97□□□□□ -0.97
TSC2-219ENST00000563346 TEN1Q86WV5 123 aa8.97□□□□□ -0.97
TSC2-219ENST00000563346 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.96□□□□□ -0.98
TSC2-219ENST00000563346 H0YGX0 51 aa8.96□□□□□ -0.98
TSC2-219ENST00000563346 DLEU1O43261 78 aa8.96□□□□□ -0.98
TSC2-219ENST00000563346 NDUFV3P56181 108 aaKnown RBP8.96□□□□□ -0.98
TSC2-219ENST00000563346 A0A087WSZ3 146 aa8.93□□□□□ -0.98
TSC2-219ENST00000563346 C14orf144Q96I85 54 aa8.93□□□□□ -0.98
TSC2-219ENST00000563346 C20orf166-AS1Q96NR2 134 aa8.93□□□□□ -0.98
TSC2-219ENST00000563346 A0A0B4J2C4 111 aa8.92□□□□□ -0.98
TSC2-219ENST00000563346 GHRHP01286 108 aa8.92□□□□□ -0.98
TSC2-219ENST00000563346 FAM218AQ96MZ4 157 aa8.92□□□□□ -0.98
TSC2-219ENST00000563346 H3BMG7 143 aa8.91□□□□□ -0.98
TSC2-219ENST00000563346 TRBV20-1A0A075B6N2 111 aa8.9□□□□□ -0.98
TSC2-219ENST00000563346 A8MUU9 505 aa8.9□□□□□ -0.98
TSC2-219ENST00000563346 FABP2P12104 132 aa8.9□□□□□ -0.98
TSC2-219ENST00000563346 HIGD1BQ9P298 99 aa8.9□□□□□ -0.98
TSC2-219ENST00000563346 S100A1P23297 94 aa8.89□□□□□ -0.99
TSC2-219ENST00000563346 PAM16Q9Y3D7 125 aa8.89□□□□□ -0.99
TSC2-219ENST00000563346 A0A1B0GX51 115 aa8.87□□□□□ -0.99
TSC2-219ENST00000563346 SPATA45Q537H7 98 aa8.87□□□□□ -0.99
TSC2-219ENST00000563346 DSCR10P59022 87 aa8.86□□□□□ -0.99
TSC2-219ENST00000563346 SIGMAR1Q99720 223 aa8.86□□□□□ -0.99
TSC2-219ENST00000563346 PRO1854Q9UHT4 67 aa8.85□□□□□ -0.99
TSC2-219ENST00000563346 TMEM238LA0A1B0GVL6 79 aa8.84□□□□□ -0.99
TSC2-219ENST00000563346 C2orf91Q6ZV80 131 aa8.84□□□□□ -0.99
TSC2-219ENST00000563346 CEND1Q8N111 149 aa8.84□□□□□ -0.99
TSC2-219ENST00000563346 VAMP8Q9BV40 100 aa8.84□□□□□ -0.99
TSC2-219ENST00000563346 USH2AO75445 5202 aa8.84□□□□□ -0.99
TSC2-219ENST00000563346 SSPOA2VEC9 5147 aa8.83□□□□□ -1
TSC2-219ENST00000563346 A0A1W2PNM2 257 aa8.82□□□□□ -1
TSC2-219ENST00000563346 LINC00313P59037 77 aa8.8□□□□□ -1
TSC2-219ENST00000563346 TRIAP1O43715 76 aa8.79□□□□□ -1
TSC2-219ENST00000563346 DNAL4O96015 105 aa8.79□□□□□ -1
TSC2-219ENST00000563346 IGKV4-1P06312 121 aa8.79□□□□□ -1
TSC2-219ENST00000563346 ANKRD29Q8N6D5 301 aa8.79□□□□□ -1
TSC2-219ENST00000563346 FAM236DA0A1B0GTK5 79 aa8.77□□□□□ -1.01
TSC2-219ENST00000563346 A0A1B0GV72 72 aa8.77□□□□□ -1.01
TSC2-219ENST00000563346 FAM236CP0DP71 79 aa8.77□□□□□ -1.01
TSC2-219ENST00000563346 FXYD2P54710 66 aa8.77□□□□□ -1.01
TSC2-219ENST00000563346 ORMDL1Q9P0S3 153 aa8.77□□□□□ -1.01
TSC2-219ENST00000563346 TRBV7-4A0A0J9YYF1 115 aa8.76□□□□□ -1.01
TSC2-219ENST00000563346 KRTAP9-8Q9BYQ0 159 aa8.76□□□□□ -1.01
TSC2-219ENST00000563346 H3BQ85 93 aa8.74□□□□□ -1.01
TSC2-219ENST00000563346 PSMB2P49721 201 aa8.74□□□□□ -1.01
TSC2-219ENST00000563346 KRTAP16-1A8MUX0 517 aa8.72□□□□□ -1.01
TSC2-219ENST00000563346 DEFB116Q30KQ4 102 aa8.72□□□□□ -1.01
TSC2-219ENST00000563346 TMEM256-PLSCR3K7ERE1 68 aa8.71□□□□□ -1.02
TSC2-219ENST00000563346 TRACP01848 142 aa8.71□□□□□ -1.02
TSC2-219ENST00000563346 RBM12B-AS1Q9P1G2 102 aa8.71□□□□□ -1.02
TSC2-219ENST00000563346 CCKP06307 115 aa8.7□□□□□ -1.02
TSC2-219ENST00000563346 COX6CP09669 75 aa8.7□□□□□ -1.02
TSC2-219ENST00000563346 FCGBPQ9Y6R7 5405 aaPredicted RBP8.69□□□□□ -1.02
TSC2-219ENST00000563346 IGHV6-1A0A0B4J1U7 121 aa8.69□□□□□ -1.02
TSC2-219ENST00000563346 NOTCH2NLQ7Z3S9 236 aa8.69□□□□□ -1.02
TSC2-219ENST00000563346 LINC00472Q9H8W2 130 aa8.68□□□□□ -1.02
TSC2-219ENST00000563346 K7ERJ3 54 aa8.67□□□□□ -1.02
TSC2-219ENST00000563346 HSD52Q0P140 79 aa8.67□□□□□ -1.02
TSC2-219ENST00000563346 HRES1P13985 223 aa8.64□□□□□ -1.03
TSC2-219ENST00000563346 UBE2V1Q13404 147 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms