RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 HIST1H2BCP62807 126 aa9.95□□□□□ -0.82
CDH11-203ENST00000562325 HIST2H2BEQ16778 126 aa9.95□□□□□ -0.82
CDH11-203ENST00000562325 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.95□□□□□ -0.82
CDH11-203ENST00000562325 MUSTN1Q8IVN3 82 aa9.95□□□□□ -0.82
CDH11-203ENST00000562325 HIST1H2BHQ93079 126 aa9.95□□□□□ -0.82
CDH11-203ENST00000562325 HIST1H2BNQ99877 126 aa9.95□□□□□ -0.82
CDH11-203ENST00000562325 HIST1H2BMQ99879 126 aa9.95□□□□□ -0.82
CDH11-203ENST00000562325 IGFL1Q6UW32 110 aa9.94□□□□□ -0.82
CDH11-203ENST00000562325 LINC00575Q6W349 94 aa9.94□□□□□ -0.82
CDH11-203ENST00000562325 C3orf79P0CE67 100 aa9.93□□□□□ -0.82
CDH11-203ENST00000562325 SSPOA2VEC9 5147 aa9.93□□□□□ -0.82
CDH11-203ENST00000562325 OCIAD2Q56VL3 154 aa9.92□□□□□ -0.82
CDH11-203ENST00000562325 Q6ZQY7 126 aa9.91□□□□□ -0.82
CDH11-203ENST00000562325 PPDPFLQ8WWR9 84 aa9.91□□□□□ -0.82
CDH11-203ENST00000562325 C20orf166-AS1Q96NR2 134 aa9.91□□□□□ -0.82
CDH11-203ENST00000562325 USH2AO75445 5202 aa9.91□□□□□ -0.82
CDH11-203ENST00000562325 TRBV20-1A0A075B6N2 111 aa9.9□□□□□ -0.82
CDH11-203ENST00000562325 hADV29S1A0JD25 119 aa9.9□□□□□ -0.82
CDH11-203ENST00000562325 SLC7A5P1Q8MH63 180 aa9.9□□□□□ -0.82
CDH11-203ENST00000562325 LST1O00453 97 aa9.89□□□□□ -0.83
CDH11-203ENST00000562325 SCGB1D1O95968 90 aa9.88□□□□□ -0.83
CDH11-203ENST00000562325 ANKRD39Q53RE8 183 aa9.88□□□□□ -0.83
CDH11-203ENST00000562325 Q96NJ1 140 aa9.88□□□□□ -0.83
CDH11-203ENST00000562325 A8MUU9 505 aa9.86□□□□□ -0.83
CDH11-203ENST00000562325 KRTDAPP60985 99 aa9.86□□□□□ -0.83
CDH11-203ENST00000562325 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.86□□□□□ -0.83
CDH11-203ENST00000562325 SS18L2Q9UHA2 77 aa9.86□□□□□ -0.83
CDH11-203ENST00000562325 COA6Q5JTJ3 125 aaKnown RBP9.84□□□□□ -0.83
CDH11-203ENST00000562325 SNRPEP62304 92 aaKnown RBP9.82□□□□□ -0.84
CDH11-203ENST00000562325 FCGBPQ9Y6R7 5405 aaPredicted RBP9.81□□□□□ -0.84
CDH11-203ENST00000562325 SNHG12Q9BXW3 62 aa9.8□□□□□ -0.84
CDH11-203ENST00000562325 BVES-AS1Q5T3Y7 98 aa9.78□□□□□ -0.84
CDH11-203ENST00000562325 MT2AP02795 61 aa9.77□□□□□ -0.85
CDH11-203ENST00000562325 ATOH7Q8N100 152 aa9.76□□□□□ -0.85
CDH11-203ENST00000562325 TEN1Q86WV5 123 aa9.75□□□□□ -0.85
CDH11-203ENST00000562325 H3BUT2 72 aa9.73□□□□□ -0.85
CDH11-203ENST00000562325 KRTAP19-1Q8IUB9 90 aa9.73□□□□□ -0.85
CDH11-203ENST00000562325 LCE2BO14633 110 aa9.71□□□□□ -0.86
CDH11-203ENST00000562325 MT1FP04733 61 aa9.69□□□□□ -0.86
CDH11-203ENST00000562325 C12orf57Q99622 126 aa9.69□□□□□ -0.86
CDH11-203ENST00000562325 KRTAP9-3Q9BYQ3 159 aa9.69□□□□□ -0.86
CDH11-203ENST00000562325 FAM236DA0A1B0GTK5 79 aa9.68□□□□□ -0.86
CDH11-203ENST00000562325 SNCGO76070 127 aa9.68□□□□□ -0.86
CDH11-203ENST00000562325 FAM236CP0DP71 79 aa9.68□□□□□ -0.86
CDH11-203ENST00000562325 MPLKIPQ8TAP9 179 aa9.67□□□□□ -0.86
CDH11-203ENST00000562325 RBM12B-AS1Q9P1G2 102 aa9.67□□□□□ -0.86
CDH11-203ENST00000562325 A0A087WSZ3 146 aa9.65□□□□□ -0.86
CDH11-203ENST00000562325 KRTAP10-10P60014 251 aa9.64□□□□□ -0.87
CDH11-203ENST00000562325 HSBP1L1C9JCN9 74 aa9.63□□□□□ -0.87
CDH11-203ENST00000562325 GHRHP01286 108 aa9.63□□□□□ -0.87
CDH11-203ENST00000562325 LINC00846Q9NV44 126 aa9.63□□□□□ -0.87
CDH11-203ENST00000562325 NDUFV3P56181 108 aaKnown RBP9.62□□□□□ -0.87
CDH11-203ENST00000562325 DSCR10P59022 87 aa9.62□□□□□ -0.87
CDH11-203ENST00000562325 MACF1Q9UPN3 7388 aaKnown RBP9.62□□□□□ -0.87
CDH11-203ENST00000562325 LINC00313P59037 77 aa9.61□□□□□ -0.87
CDH11-203ENST00000562325 KRTAP16-1A8MUX0 517 aa9.6□□□□□ -0.87
CDH11-203ENST00000562325 H0YGX0 51 aa9.6□□□□□ -0.87
CDH11-203ENST00000562325 HRES1P13985 223 aa9.6□□□□□ -0.87
CDH11-203ENST00000562325 SIGMAR1Q99720 223 aa9.58□□□□□ -0.88
CDH11-203ENST00000562325 H3BMG7 143 aa9.56□□□□□ -0.88
CDH11-203ENST00000562325 HIST1H4GQ99525 98 aa9.56□□□□□ -0.88
CDH11-203ENST00000562325 A0A1B0GX51 115 aa9.54□□□□□ -0.88
CDH11-203ENST00000562325 SYNE2Q8WXH0 6885 aaKnown RBP9.53□□□□□ -0.88
CDH11-203ENST00000562325 NOTCH2NLQ7Z3S9 236 aa9.53□□□□□ -0.88
CDH11-203ENST00000562325 MTURNQ8N3F0 131 aa9.53□□□□□ -0.88
CDH11-203ENST00000562325 KRTAP19-6Q3LI70 58 aa9.52□□□□□ -0.89
CDH11-203ENST00000562325 TRBV7-4A0A0J9YYF1 115 aa9.5□□□□□ -0.89
CDH11-203ENST00000562325 A0A1W2PNM2 257 aa9.5□□□□□ -0.89
CDH11-203ENST00000562325 IGKV4-1P06312 121 aa9.5□□□□□ -0.89
CDH11-203ENST00000562325 FAM218AQ96MZ4 157 aa9.49□□□□□ -0.89
CDH11-203ENST00000562325 HIST1H2BLQ99880 126 aa9.49□□□□□ -0.89
CDH11-203ENST00000562325 A0A0B4J2C4 111 aa9.48□□□□□ -0.89
CDH11-203ENST00000562325 RAB37Q96AX2 223 aa9.48□□□□□ -0.89
CDH11-203ENST00000562325 DLEU1O43261 78 aa9.46□□□□□ -0.9
CDH11-203ENST00000562325 FABP2P12104 132 aa9.46□□□□□ -0.9
CDH11-203ENST00000562325 S100A2P29034 98 aa9.46□□□□□ -0.9
CDH11-203ENST00000562325 HIST3H2BBQ8N257 126 aa9.46□□□□□ -0.9
CDH11-203ENST00000562325 COX8AP10176 69 aa9.45□□□□□ -0.9
CDH11-203ENST00000562325 H3BQ85 93 aa9.43□□□□□ -0.9
CDH11-203ENST00000562325 LINC00472Q9H8W2 130 aa9.43□□□□□ -0.9
CDH11-203ENST00000562325 ANKRD29Q8N6D5 301 aa9.42□□□□□ -0.9
CDH11-203ENST00000562325 A8MWP4 228 aa9.39□□□□□ -0.91
CDH11-203ENST00000562325 C8orf87E5RJ46 101 aa9.39□□□□□ -0.91
CDH11-203ENST00000562325 HIGD1BQ9P298 99 aa9.39□□□□□ -0.91
CDH11-203ENST00000562325 IGHV6-1A0A0B4J1U7 121 aa9.38□□□□□ -0.91
CDH11-203ENST00000562325 KRTAP6-3Q3LI67 103 aa9.35□□□□□ -0.91
CDH11-203ENST00000562325 PRO1854Q9UHT4 67 aa9.35□□□□□ -0.91
CDH11-203ENST00000562325 TRACP01848 142 aa9.34□□□□□ -0.91
CDH11-203ENST00000562325 ZCCHC13Q8WW36 166 aaKnown RBP9.34□□□□□ -0.91
CDH11-203ENST00000562325 DNAL4O96015 105 aa9.33□□□□□ -0.92
CDH11-203ENST00000562325 SPINK7P58062 85 aa9.33□□□□□ -0.92
CDH11-203ENST00000562325 DEFB116Q30KQ4 102 aa9.33□□□□□ -0.92
CDH11-203ENST00000562325 ORMDL1Q9P0S3 153 aa9.33□□□□□ -0.92
CDH11-203ENST00000562325 TMEM238LA0A1B0GVL6 79 aa9.32□□□□□ -0.92
CDH11-203ENST00000562325 A0A1B0GVX0 72 aa9.32□□□□□ -0.92
CDH11-203ENST00000562325 A6NJY4 79 aa9.32□□□□□ -0.92
CDH11-203ENST00000562325 TMEM256-PLSCR3K7ERE1 68 aa9.32□□□□□ -0.92
CDH11-203ENST00000562325 CCKP06307 115 aa9.32□□□□□ -0.92
CDH11-203ENST00000562325 TRIAP1O43715 76 aa9.29□□□□□ -0.92
CDH11-203ENST00000562325 S100A6P06703 90 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms