RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 KCNQ1DNQ9H478 68 aa3.28□□□□□ -1.88
CAPN3-211ENST00000562199 HIVEP3Q5T1R4 2406 aa3.28□□□□□ -1.89
CAPN3-211ENST00000562199 GVINP1Q7Z2Y8 2422 aa3.28□□□□□ -1.89
CAPN3-211ENST00000562199 A0A087WTM6 91 aa3.27□□□□□ -1.89
CAPN3-211ENST00000562199 COX7BP24311 80 aa3.27□□□□□ -1.89
CAPN3-211ENST00000562199 TACC2O95359 2948 aa3.27□□□□□ -1.89
CAPN3-211ENST00000562199 LRBAP50851 2863 aa3.27□□□□□ -1.89
CAPN3-211ENST00000562199 ANGP03950 147 aaKnown RBP3.26□□□□□ -1.89
CAPN3-211ENST00000562199 DEFB130BP0DP73 79 aa3.26□□□□□ -1.89
CAPN3-211ENST00000562199 DEFB130AP0DP74 79 aa3.26□□□□□ -1.89
CAPN3-211ENST00000562199 SPINT4Q6UDR6 99 aa3.26□□□□□ -1.89
CAPN3-211ENST00000562199 LAMA5O15230 3695 aa3.26□□□□□ -1.89
CAPN3-211ENST00000562199 UNQ6190/PRO20217Q6UXQ8 127 aa3.25□□□□□ -1.89
CAPN3-211ENST00000562199 LINC00472Q9H8W2 130 aa3.25□□□□□ -1.89
CAPN3-211ENST00000562199 PIEZO1Q92508 2521 aa3.24□□□□□ -1.89
CAPN3-211ENST00000562199 AKAP6Q13023 2319 aa3.24□□□□□ -1.89
CAPN3-211ENST00000562199 A0A096LPF7 62 aa3.24□□□□□ -1.89
CAPN3-211ENST00000562199 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
CAPN3-211ENST00000562199 LELP1Q5T871 98 aa3.24□□□□□ -1.89
CAPN3-211ENST00000562199 C6orf48Q9UBA6 75 aa3.24□□□□□ -1.89
CAPN3-211ENST00000562199 SPTAN1Q13813 2472 aaKnown RBP3.24□□□□□ -1.89
CAPN3-211ENST00000562199 SPTA1P02549 2419 aa3.23□□□□□ -1.89
CAPN3-211ENST00000562199 FAM168BA1KXE4 195 aa3.23□□□□□ -1.89
CAPN3-211ENST00000562199 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
CAPN3-211ENST00000562199 CACNA1AO00555 2505 aa3.23□□□□□ -1.89
CAPN3-211ENST00000562199 SORL1Q92673 2214 aa3.23□□□□□ -1.89
CAPN3-211ENST00000562199 MUC6Q6W4X9 2439 aa3.22□□□□□ -1.89
CAPN3-211ENST00000562199 NBDYA0A0U1RRE5 68 aa3.22□□□□□ -1.89
CAPN3-211ENST00000562199 TYMSOSQ8TAI1 123 aa3.22□□□□□ -1.89
CAPN3-211ENST00000562199 SVEP1Q4LDE5 3571 aa3.22□□□□□ -1.89
CAPN3-211ENST00000562199 ZFHX2Q9C0A1 2572 aaPredicted RBP3.21□□□□□ -1.9
CAPN3-211ENST00000562199 RELNP78509 3460 aa3.21□□□□□ -1.9
CAPN3-211ENST00000562199 RIF1Q5UIP0 2472 aaKnown RBP3.21□□□□□ -1.9
CAPN3-211ENST00000562199 CELSR1Q9NYQ6 3014 aa3.2□□□□□ -1.9
CAPN3-211ENST00000562199 PRB2P02812 416 aaPredicted RBP3.2□□□□□ -1.9
CAPN3-211ENST00000562199 ATRXP46100 2492 aa3.2□□□□□ -1.9
CAPN3-211ENST00000562199 IGF2RP11717 2491 aa3.19□□□□□ -1.9
CAPN3-211ENST00000562199 IGLV5-48A0A075B6I7 105 aa3.19□□□□□ -1.9
CAPN3-211ENST00000562199 A0A1B0GU69 56 aa3.19□□□□□ -1.9
CAPN3-211ENST00000562199 Q8N9L7 120 aa3.19□□□□□ -1.9
CAPN3-211ENST00000562199 Q96NJ1 140 aa3.19□□□□□ -1.9
CAPN3-211ENST00000562199 PSORS1C2Q9UIG4 136 aa3.19□□□□□ -1.9
CAPN3-211ENST00000562199 SPART-AS1P0CW21 52 aa3.18□□□□□ -1.9
CAPN3-211ENST00000562199 DEFB135Q30KP9 77 aa3.18□□□□□ -1.9
CAPN3-211ENST00000562199 DOPEY1Q5JWR5 2465 aa3.18□□□□□ -1.9
CAPN3-211ENST00000562199 VPS13CQ709C8 3753 aa3.18□□□□□ -1.9
CAPN3-211ENST00000562199 CEP295Q9C0D2 2601 aa3.18□□□□□ -1.9
CAPN3-211ENST00000562199 CSPG4Q6UVK1 2322 aa3.18□□□□□ -1.9
CAPN3-211ENST00000562199 NBASA2RRP1 2371 aa3.17□□□□□ -1.9
CAPN3-211ENST00000562199 AKAP9Q99996 3911 aa3.17□□□□□ -1.9
CAPN3-211ENST00000562199 PRB1P04280 392 aa3.17□□□□□ -1.9
CAPN3-211ENST00000562199 RPL37AP61513 92 aaKnown RBP3.17□□□□□ -1.9
CAPN3-211ENST00000562199 A0A1W2PNN7 141 aa3.16□□□□□ -1.9
CAPN3-211ENST00000562199 H3BNG1 76 aa3.16□□□□□ -1.9
CAPN3-211ENST00000562199 DEFB4AO15263 64 aa3.16□□□□□ -1.9
CAPN3-211ENST00000562199 HTN3P15516 51 aa3.16□□□□□ -1.9
CAPN3-211ENST00000562199 KRTAP10-3P60369 221 aa3.16□□□□□ -1.9
CAPN3-211ENST00000562199 R4GN34 69 aa3.16□□□□□ -1.9
CAPN3-211ENST00000562199 SPRR1AP35321 89 aa3.15□□□□□ -1.91
CAPN3-211ENST00000562199 Q6ZRX8 168 aa3.15□□□□□ -1.91
CAPN3-211ENST00000562199 WFDC10BQ8IUB3 73 aa3.15□□□□□ -1.91
CAPN3-211ENST00000562199 KMT2BQ9UMN6 2715 aaPredicted RBP3.15□□□□□ -1.91
CAPN3-211ENST00000562199 ANK3Q12955 4377 aaKnown RBP3.15□□□□□ -1.91
CAPN3-211ENST00000562199 ASH1LQ9NR48 2969 aaKnown RBP3.15□□□□□ -1.91
CAPN3-211ENST00000562199 LINC00304Q8N9R0 145 aa3.14□□□□□ -1.91
CAPN3-211ENST00000562199 CREBBPQ92793 2442 aa3.14□□□□□ -1.91
CAPN3-211ENST00000562199 NOTCH3Q9UM47 2321 aa3.14□□□□□ -1.91
CAPN3-211ENST00000562199 MT3P25713 68 aa3.13□□□□□ -1.91
CAPN3-211ENST00000562199 DSCR10P59022 87 aa3.13□□□□□ -1.91
CAPN3-211ENST00000562199 LINC01556Q5JQF7 62 aa3.13□□□□□ -1.91
CAPN3-211ENST00000562199 DEFB131BA0A096LNP1 70 aa3.12□□□□□ -1.91
CAPN3-211ENST00000562199 K7EQZ3 153 aa3.12□□□□□ -1.91
CAPN3-211ENST00000562199 DEFB105AQ8NG35 78 aa3.12□□□□□ -1.91
CAPN3-211ENST00000562199 WNK1Q9H4A3 2382 aa3.11□□□□□ -1.91
CAPN3-211ENST00000562199 FBN2P35556 2912 aa3.11□□□□□ -1.91
CAPN3-211ENST00000562199 SPTBN4Q9H254 2564 aa3.11□□□□□ -1.91
CAPN3-211ENST00000562199 ANKRD17O75179 2603 aaKnown RBP3.11□□□□□ -1.91
CAPN3-211ENST00000562199 EPG5Q9HCE0 2579 aa3.1□□□□□ -1.91
CAPN3-211ENST00000562199 IGKV2D-24A0A075B6R9 120 aa3.1□□□□□ -1.91
CAPN3-211ENST00000562199 A0A0G2JQZ4 141 aa3.1□□□□□ -1.91
CAPN3-211ENST00000562199 TPRXLQ17RH7 258 aa3.1□□□□□ -1.91
CAPN3-211ENST00000562199 NCOR2Q9Y618 2525 aa3.1□□□□□ -1.91
CAPN3-211ENST00000562199 C2CD3Q4AC94 2353 aa3.09□□□□□ -1.91
CAPN3-211ENST00000562199 ACYP2P14621 99 aa3.09□□□□□ -1.91
CAPN3-211ENST00000562199 SPACA4Q8TDM5 124 aa3.09□□□□□ -1.91
CAPN3-211ENST00000562199 SPG11Q96JI7 2443 aa3.09□□□□□ -1.92
CAPN3-211ENST00000562199 CHD6Q8TD26 2715 aa3.08□□□□□ -1.92
CAPN3-211ENST00000562199 KRTAP7-1Q8IUC3 87 aa3.08□□□□□ -1.92
CAPN3-211ENST00000562199 ITPR1Q14643 2758 aa3.08□□□□□ -1.92
CAPN3-211ENST00000562199 NBPF19A0A087WUL8 3843 aa3.07□□□□□ -1.92
CAPN3-211ENST00000562199 PKD1L2Q7Z442 2459 aa3.07□□□□□ -1.92
CAPN3-211ENST00000562199 HRES1P13985 223 aa3.07□□□□□ -1.92
CAPN3-211ENST00000562199 IGFL1Q6UW32 110 aa3.07□□□□□ -1.92
CAPN3-211ENST00000562199 USP9XQ93008 2570 aaPredicted RBP3.07□□□□□ -1.92
CAPN3-211ENST00000562199 SETXQ7Z333 2677 aaKnown RBP3.07□□□□□ -1.92
CAPN3-211ENST00000562199 BAHCC1Q9P281 2608 aa3.06□□□□□ -1.92
CAPN3-211ENST00000562199 USP24Q9UPU5 2620 aa3.06□□□□□ -1.92
CAPN3-211ENST00000562199 CRYBG3Q68DQ2 2970 aa3.06□□□□□ -1.92
CAPN3-211ENST00000562199 WFDC13Q8IUB5 93 aa3.06□□□□□ -1.92
CAPN3-211ENST00000562199 KRTAP11-1Q8IUC1 163 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms