RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 GTF2H5Q6ZYL4 71 aa4.73□□□□□ -1.65
GINS3-204ENST00000561952 LINC00337Q8N6G1 96 aa4.73□□□□□ -1.65
GINS3-204ENST00000561952 Q8NBF4 154 aa4.73□□□□□ -1.65
GINS3-204ENST00000561952 COPS9Q8WXC6 57 aa4.73□□□□□ -1.65
GINS3-204ENST00000561952 KCNQ1DNQ9H478 68 aa4.73□□□□□ -1.65
GINS3-204ENST00000561952 PRO1854Q9UHT4 67 aa4.73□□□□□ -1.65
GINS3-204ENST00000561952 IGLV9-49A0A0B4J1Y8 123 aa4.72□□□□□ -1.65
GINS3-204ENST00000561952 A0A0U1RQV1 116 aa4.72□□□□□ -1.65
GINS3-204ENST00000561952 SPRR1AP35321 89 aa4.72□□□□□ -1.65
GINS3-204ENST00000561952 S100A7L2Q5SY68 101 aa4.72□□□□□ -1.65
GINS3-204ENST00000561952 B5MCH6 92 aa4.71□□□□□ -1.66
GINS3-204ENST00000561952 KRTAP4-16G5E9R7 235 aaPredicted RBP4.71□□□□□ -1.66
GINS3-204ENST00000561952 ERC2-IT1O76042 136 aa4.71□□□□□ -1.66
GINS3-204ENST00000561952 MOBPQ13875 183 aa4.71□□□□□ -1.66
GINS3-204ENST00000561952 TPRXLQ17RH7 258 aa4.71□□□□□ -1.66
GINS3-204ENST00000561952 LINC00308Q8TCZ7 52 aa4.71□□□□□ -1.66
GINS3-204ENST00000561952 NAA38Q9BRA0 125 aaKnown RBP4.71□□□□□ -1.66
GINS3-204ENST00000561952 SPCS1Q9Y6A9 102 aa4.71□□□□□ -1.66
GINS3-204ENST00000561952 LOC107984156A0A0G2JMH3 177 aa4.7□□□□□ -1.66
GINS3-204ENST00000561952 LYRM7Q5U5X0 104 aa4.7□□□□□ -1.66
GINS3-204ENST00000561952 SPAG11AQ6PDA7 123 aa4.7□□□□□ -1.66
GINS3-204ENST00000561952 SOSTDC1Q6X4U4 206 aa4.7□□□□□ -1.66
GINS3-204ENST00000561952 ARL17AQ8IVW1 177 aa4.7□□□□□ -1.66
GINS3-204ENST00000561952 Q9BRP9 147 aa4.7□□□□□ -1.66
GINS3-204ENST00000561952 FAT4Q6V0I7 4981 aa4.7□□□□□ -1.66
GINS3-204ENST00000561952 TRAV23DV6A0A075B6W5 121 aa4.69□□□□□ -1.66
GINS3-204ENST00000561952 C9orf153Q5TBE3 101 aa4.69□□□□□ -1.66
GINS3-204ENST00000561952 TRBV20-1A0A075B6N2 111 aa4.68□□□□□ -1.66
GINS3-204ENST00000561952 TRBV10-2A0A0K0K1G8 114 aa4.68□□□□□ -1.66
GINS3-204ENST00000561952 LINC00483Q53H64 154 aa4.68□□□□□ -1.66
GINS3-204ENST00000561952 Q6ZRX8 168 aa4.68□□□□□ -1.66
GINS3-204ENST00000561952 IGLV6-57P01721 117 aa4.67□□□□□ -1.66
GINS3-204ENST00000561952 OR13C6PQ8NH95 151 aa4.67□□□□□ -1.66
GINS3-204ENST00000561952 F8W1H4 67 aa4.66□□□□□ -1.66
GINS3-204ENST00000561952 ZNF73O43830 326 aaPredicted RBP4.66□□□□□ -1.66
GINS3-204ENST00000561952 NDUFC2O95298 119 aa4.66□□□□□ -1.66
GINS3-204ENST00000561952 SPINK1P00995 79 aa4.66□□□□□ -1.66
GINS3-204ENST00000561952 FP248Q71RG6 208 aaPredicted RBP4.66□□□□□ -1.66
GINS3-204ENST00000561952 ST20-AS1Q8NBB2 130 aa4.66□□□□□ -1.66
GINS3-204ENST00000561952 PRO0461Q9UI25 63 aa4.66□□□□□ -1.66
GINS3-204ENST00000561952 H3BMG7 143 aa4.65□□□□□ -1.67
GINS3-204ENST00000561952 TCL1BO95988 128 aa4.65□□□□□ -1.67
GINS3-204ENST00000561952 TRAV13-2A0A0B4J235 113 aa4.64□□□□□ -1.67
GINS3-204ENST00000561952 TRIAP1O43715 76 aa4.64□□□□□ -1.67
GINS3-204ENST00000561952 PSMB2P49721 201 aa4.64□□□□□ -1.67
GINS3-204ENST00000561952 KRTAP13-3Q3SY46 172 aa4.64□□□□□ -1.67
GINS3-204ENST00000561952 COX6CP09669 75 aa4.63□□□□□ -1.67
GINS3-204ENST00000561952 SCGB1C2P0DMR2 95 aa4.63□□□□□ -1.67
GINS3-204ENST00000561952 HRCT1Q6UXD1 115 aa4.63□□□□□ -1.67
GINS3-204ENST00000561952 SSBP3-AS1Q7Z2R9 100 aa4.63□□□□□ -1.67
GINS3-204ENST00000561952 Q8N377 158 aa4.63□□□□□ -1.67
GINS3-204ENST00000561952 H7C2G1 150 aa4.62□□□□□ -1.67
GINS3-204ENST00000561952 ATXN8Q156A1 80 aa4.62□□□□□ -1.67
GINS3-204ENST00000561952 Q1RN00 199 aa4.62□□□□□ -1.67
GINS3-204ENST00000561952 LST1O00453 97 aa4.61□□□□□ -1.67
GINS3-204ENST00000561952 OCIAD2Q56VL3 154 aa4.61□□□□□ -1.67
GINS3-204ENST00000561952 K7ERU9 68 aa4.6□□□□□ -1.67
GINS3-204ENST00000561952 SLC25A20O43772 301 aa4.6□□□□□ -1.67
GINS3-204ENST00000561952 C6orf99Q4VX62 202 aa4.6□□□□□ -1.67
GINS3-204ENST00000561952 DEFB105AQ8NG35 78 aa4.6□□□□□ -1.67
GINS3-204ENST00000561952 CBY1Q9Y3M2 126 aa4.6□□□□□ -1.67
GINS3-204ENST00000561952 COX7BP24311 80 aa4.59□□□□□ -1.67
GINS3-204ENST00000561952 RPS29P62273 56 aaKnown RBP4.59□□□□□ -1.67
GINS3-204ENST00000561952 C9JAW5 83 aa4.58□□□□□ -1.68
GINS3-204ENST00000561952 H0YGX0 51 aa4.58□□□□□ -1.68
GINS3-204ENST00000561952 H3BT86 120 aa4.58□□□□□ -1.68
GINS3-204ENST00000561952 TRACP01848 142 aa4.58□□□□□ -1.68
GINS3-204ENST00000561952 ELOF1P60002 83 aaKnown RBP4.58□□□□□ -1.68
GINS3-204ENST00000561952 SEC61BP60468 96 aaKnown RBP4.58□□□□□ -1.68
GINS3-204ENST00000561952 ASB16-AS1Q495Z4 193 aa4.58□□□□□ -1.68
GINS3-204ENST00000561952 TEN1Q86WV5 123 aa4.58□□□□□ -1.68
GINS3-204ENST00000561952 SMIM11BQ8TCY0 68 aa4.58□□□□□ -1.68
GINS3-204ENST00000561952 CLEC2BQ92478 149 aa4.58□□□□□ -1.68
GINS3-204ENST00000561952 KRTAP4-1Q9BYQ7 146 aa4.58□□□□□ -1.68
GINS3-204ENST00000561952 DHRS4-AS1Q9P1J3 65 aa4.58□□□□□ -1.68
GINS3-204ENST00000561952 LAMTOR3Q9UHA4 124 aa4.58□□□□□ -1.68
GINS3-204ENST00000561952 C9orf92A6NGG3 77 aa4.57□□□□□ -1.68
GINS3-204ENST00000561952 ETDBQ3ZM63 59 aa4.57□□□□□ -1.68
GINS3-204ENST00000561952 MTURNQ8N3F0 131 aa4.56□□□□□ -1.68
GINS3-204ENST00000561952 ANKRD29Q8N6D5 301 aa4.56□□□□□ -1.68
GINS3-204ENST00000561952 PPDPFLQ8WWR9 84 aa4.56□□□□□ -1.68
GINS3-204ENST00000561952 LIMD2Q9BT23 127 aa4.56□□□□□ -1.68
GINS3-204ENST00000561952 A0A0G2JQZ4 141 aa4.55□□□□□ -1.68
GINS3-204ENST00000561952 A0A1B0GX51 115 aa4.55□□□□□ -1.68
GINS3-204ENST00000561952 J3QR89 54 aa4.55□□□□□ -1.68
GINS3-204ENST00000561952 SPRR1BP22528 89 aa4.55□□□□□ -1.68
GINS3-204ENST00000561952 LINC01547P58512 204 aaPredicted RBP4.54□□□□□ -1.68
GINS3-204ENST00000561952 FAM218AQ96MZ4 157 aa4.54□□□□□ -1.68
GINS3-204ENST00000561952 TRBV7-6A0A0J9YX20 115 aa4.53□□□□□ -1.68
GINS3-204ENST00000561952 TEX49A0A1B0GTD5 131 aa4.53□□□□□ -1.68
GINS3-204ENST00000561952 BAALC-AS2P0C853 105 aa4.51□□□□□ -1.69
GINS3-204ENST00000561952 PCOTHQ58A44 107 aa4.51□□□□□ -1.69
GINS3-204ENST00000561952 SMIM29Q86T20 159 aa4.51□□□□□ -1.69
GINS3-204ENST00000561952 LINC00575Q6W349 94 aa4.5□□□□□ -1.69
GINS3-204ENST00000561952 IGLV8-61A0A075B6I0 122 aa4.49□□□□□ -1.69
GINS3-204ENST00000561952 DNAL4O96015 105 aa4.49□□□□□ -1.69
GINS3-204ENST00000561952 OBSCN-AS1Q96MR7 158 aa4.49□□□□□ -1.69
GINS3-204ENST00000561952 IGLV5-48A0A075B6I7 105 aa4.48□□□□□ -1.69
GINS3-204ENST00000561952 H3BQ85 93 aa4.48□□□□□ -1.69
GINS3-204ENST00000561952 SNCGO76070 127 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms