RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 CFC1P0CG37 223 aa13.14□□□□□ -0.31
CDR2-202ENST00000561630 SEC61BP60468 96 aaKnown RBP13.14□□□□□ -0.31
CDR2-202ENST00000561630 C2orf91Q6ZV80 131 aa13.13□□□□□ -0.31
CDR2-202ENST00000561630 F8WEM9 126 aa13.12□□□□□ -0.31
CDR2-202ENST00000561630 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.11□□□□□ -0.31
CDR2-202ENST00000561630 RAB37Q96AX2 223 aa13.1□□□□□ -0.31
CDR2-202ENST00000561630 A0A0B4J2C4 111 aa13.09□□□□□ -0.31
CDR2-202ENST00000561630 IGLV8-61A0A075B6I0 122 aa13.07□□□□□ -0.32
CDR2-202ENST00000561630 C1orf195Q5TG92 126 aa13.07□□□□□ -0.32
CDR2-202ENST00000561630 PPDPFLQ8WWR9 84 aa13.06□□□□□ -0.32
CDR2-202ENST00000561630 Q6JHZ5 121 aa13.05□□□□□ -0.32
CDR2-202ENST00000561630 CEND1Q8N111 149 aa13.05□□□□□ -0.32
CDR2-202ENST00000561630 OCIAD2Q56VL3 154 aa13.03□□□□□ -0.32
CDR2-202ENST00000561630 LCE2AQ5TA79 106 aaPredicted RBP13.03□□□□□ -0.32
CDR2-202ENST00000561630 KRTAP4-1Q9BYQ7 146 aa13.03□□□□□ -0.32
CDR2-202ENST00000561630 C9orf92A6NGG3 77 aa13.02□□□□□ -0.33
CDR2-202ENST00000561630 TCL1BO95988 128 aa13.02□□□□□ -0.33
CDR2-202ENST00000561630 PYY3Q5JQD4 70 aa13.02□□□□□ -0.33
CDR2-202ENST00000561630 H0YGX0 51 aa13.01□□□□□ -0.33
CDR2-202ENST00000561630 CLEC2BQ92478 149 aa13.01□□□□□ -0.33
CDR2-202ENST00000561630 TMEM238LA0A1B0GVL6 79 aa13□□□□□ -0.33
CDR2-202ENST00000561630 A6NJY4 79 aa13□□□□□ -0.33
CDR2-202ENST00000561630 IGFL1Q6UW32 110 aa13□□□□□ -0.33
CDR2-202ENST00000561630 SNHG12Q9BXW3 62 aa13□□□□□ -0.33
CDR2-202ENST00000561630 SNCGO76070 127 aa12.98□□□□□ -0.33
CDR2-202ENST00000561630 PRO1854Q9UHT4 67 aa12.98□□□□□ -0.33
CDR2-202ENST00000561630 FXYD2P54710 66 aa12.97□□□□□ -0.33
CDR2-202ENST00000561630 FAM218AQ96MZ4 157 aa12.96□□□□□ -0.33
CDR2-202ENST00000561630 TRBV7-7A0A0K0K1E9 115 aa12.95□□□□□ -0.34
CDR2-202ENST00000561630 TMA7Q9Y2S6 64 aaKnown RBP12.92□□□□□ -0.34
CDR2-202ENST00000561630 H3BUT2 72 aa12.91□□□□□ -0.34
CDR2-202ENST00000561630 HSD52Q0P140 79 aa12.9□□□□□ -0.34
CDR2-202ENST00000561630 A0A1B0GX51 115 aa12.89□□□□□ -0.35
CDR2-202ENST00000561630 PCOTHQ58A44 107 aa12.88□□□□□ -0.35
CDR2-202ENST00000561630 TRIAP1O43715 76 aa12.87□□□□□ -0.35
CDR2-202ENST00000561630 NDUFV3P56181 108 aaKnown RBP12.86□□□□□ -0.35
CDR2-202ENST00000561630 GHRHP01286 108 aa12.84□□□□□ -0.35
CDR2-202ENST00000561630 Q6Q795 121 aa12.82□□□□□ -0.36
CDR2-202ENST00000561630 UQCR10Q9UDW1 63 aa12.82□□□□□ -0.36
CDR2-202ENST00000561630 K7ERJ3 54 aa12.81□□□□□ -0.36
CDR2-202ENST00000561630 FABP2P12104 132 aa12.79□□□□□ -0.36
CDR2-202ENST00000561630 RPL37P61927 97 aaKnown RBP12.79□□□□□ -0.36
CDR2-202ENST00000561630 H3BMG7 143 aa12.78□□□□□ -0.36
CDR2-202ENST00000561630 TEN1Q86WV5 123 aa12.78□□□□□ -0.36
CDR2-202ENST00000561630 LST1O00453 97 aa12.77□□□□□ -0.37
CDR2-202ENST00000561630 PSMB2P49721 201 aa12.76□□□□□ -0.37
CDR2-202ENST00000561630 SS18L2Q9UHA2 77 aa12.76□□□□□ -0.37
CDR2-202ENST00000561630 COX6CP09669 75 aa12.73□□□□□ -0.37
CDR2-202ENST00000561630 DNAL4O96015 105 aa12.72□□□□□ -0.37
CDR2-202ENST00000561630 ORMDL1Q9P0S3 153 aa12.71□□□□□ -0.37
CDR2-202ENST00000561630 H3BQ85 93 aa12.7□□□□□ -0.38
CDR2-202ENST00000561630 LCE2CQ5TA81 110 aa12.7□□□□□ -0.38
CDR2-202ENST00000561630 A0A087WSZ3 146 aa12.69□□□□□ -0.38
CDR2-202ENST00000561630 KRTAP19-2Q3LHN2 52 aa12.69□□□□□ -0.38
CDR2-202ENST00000561630 OBSCN-AS1Q96MR7 158 aa12.69□□□□□ -0.38
CDR2-202ENST00000561630 A0A1W2PNM2 257 aa12.65□□□□□ -0.38
CDR2-202ENST00000561630 TMEM256-PLSCR3K7ERE1 68 aa12.64□□□□□ -0.39
CDR2-202ENST00000561630 KRTAP9-2Q9BYQ4 174 aa12.64□□□□□ -0.39
CDR2-202ENST00000561630 ANKRD29Q8N6D5 301 aa12.62□□□□□ -0.39
CDR2-202ENST00000561630 Q75L30 129 aa12.61□□□□□ -0.39
CDR2-202ENST00000561630 Q96NJ1 140 aa12.61□□□□□ -0.39
CDR2-202ENST00000561630 TRBV7-4A0A0J9YYF1 115 aa12.59□□□□□ -0.39
CDR2-202ENST00000561630 TRACP01848 142 aa12.59□□□□□ -0.39
CDR2-202ENST00000561630 A0A1B0GV72 72 aa12.58□□□□□ -0.4
CDR2-202ENST00000561630 SCGB1C2P0DMR2 95 aa12.58□□□□□ -0.4
CDR2-202ENST00000561630 UBE2V1Q13404 147 aa12.57□□□□□ -0.4
CDR2-202ENST00000561630 ATP11AUNQ6ZP68 121 aa12.55□□□□□ -0.4
CDR2-202ENST00000561630 MT1HP80294 61 aa12.52□□□□□ -0.41
CDR2-202ENST00000561630 CCKP06307 115 aa12.5□□□□□ -0.41
CDR2-202ENST00000561630 M0R143 59 aa12.49□□□□□ -0.41
CDR2-202ENST00000561630 SMIM6P0DI80 62 aa12.49□□□□□ -0.41
CDR2-202ENST00000561630 C20orf166-AS1Q96NR2 134 aa12.49□□□□□ -0.41
CDR2-202ENST00000561630 SIGMAR1Q99720 223 aa12.48□□□□□ -0.41
CDR2-202ENST00000561630 A8MUU9 505 aa12.46□□□□□ -0.41
CDR2-202ENST00000561630 RBM3P98179 157 aaKnown RBP12.45□□□□□ -0.42
CDR2-202ENST00000561630 IGKV4-1P06312 121 aa12.44□□□□□ -0.42
CDR2-202ENST00000561630 BAALC-AS2P0C853 105 aa12.44□□□□□ -0.42
CDR2-202ENST00000561630 DSCR10P59022 87 aa12.44□□□□□ -0.42
CDR2-202ENST00000561630 LINC00472Q9H8W2 130 aa12.44□□□□□ -0.42
CDR2-202ENST00000561630 COX6B2Q6YFQ2 88 aa12.42□□□□□ -0.42
CDR2-202ENST00000561630 DSCR8Q96T75 97 aa12.41□□□□□ -0.42
CDR2-202ENST00000561630 LINC00313P59037 77 aa12.39□□□□□ -0.43
CDR2-202ENST00000561630 VPS25Q9BRG1 176 aa12.39□□□□□ -0.43
CDR2-202ENST00000561630 ATXN8Q156A1 80 aa12.38□□□□□ -0.43
CDR2-202ENST00000561630 DEFB116Q30KQ4 102 aa12.38□□□□□ -0.43
CDR2-202ENST00000561630 NAA38Q9BRA0 125 aaKnown RBP12.38□□□□□ -0.43
CDR2-202ENST00000561630 FLGP20930 4061 aaPredicted RBP12.34□□□□□ -0.43
CDR2-202ENST00000561630 C9JAW5 83 aa12.34□□□□□ -0.43
CDR2-202ENST00000561630 KRTAP16-1A8MUX0 517 aa12.33□□□□□ -0.44
CDR2-202ENST00000561630 TSTD3H0UI37 97 aa12.32□□□□□ -0.44
CDR2-202ENST00000561630 LCE2DQ5TA82 110 aaPredicted RBP12.32□□□□□ -0.44
CDR2-202ENST00000561630 NOTCH2NLQ7Z3S9 236 aa12.32□□□□□ -0.44
CDR2-202ENST00000561630 C21orf62-AS1Q17RA5 79 aa12.31□□□□□ -0.44
CDR2-202ENST00000561630 IGHV6-1A0A0B4J1U7 121 aa12.29□□□□□ -0.44
CDR2-202ENST00000561630 M0R2T5 61 aa12.28□□□□□ -0.44
CDR2-202ENST00000561630 JMJD7-PLA2G4BH0Y9G9 81 aa12.27□□□□□ -0.45
CDR2-202ENST00000561630 LORP23490 312 aaPredicted RBP12.27□□□□□ -0.45
CDR2-202ENST00000561630 KRTAP10-6P60371 365 aaPredicted RBP12.27□□□□□ -0.45
CDR2-202ENST00000561630 Q6ZQT0 140 aa12.26□□□□□ -0.45
CDR2-202ENST00000561630 LYRM7Q5U5X0 104 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms