RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	KRTAP10-1	P60331	282 aa		4.68	□□□□□ -1.66
TPM1-231	ENST00000561395	HAMP	P81172	84 aa		4.68	□□□□□ -1.66
TPM1-231	ENST00000561395	KRTAP11-1	Q8IUC1	163 aa		4.68	□□□□□ -1.66
TPM1-231	ENST00000561395	DPH3	Q96FX2	82 aa		4.68	□□□□□ -1.66
TPM1-231	ENST00000561395		Q9BRP9	147 aa		4.68	□□□□□ -1.66
TPM1-231	ENST00000561395		J3QR89	54 aa		4.67	□□□□□ -1.66
TPM1-231	ENST00000561395	OBSCN-AS1	Q96MR7	158 aa		4.67	□□□□□ -1.66
TPM1-231	ENST00000561395	RNF213	Q63HN8	5207 aa		4.66	□□□□□ -1.66
TPM1-231	ENST00000561395		H0Y9J4	135 aa		4.65	□□□□□ -1.67
TPM1-231	ENST00000561395	BCE1	O60756	84 aa		4.65	□□□□□ -1.67
TPM1-231	ENST00000561395	PRLH	P81277	87 aa		4.65	□□□□□ -1.67
TPM1-231	ENST00000561395		Q6ZSA8	131 aa		4.65	□□□□□ -1.67
TPM1-231	ENST00000561395	FAM19A1	Q7Z5A9	133 aa		4.65	□□□□□ -1.67
TPM1-231	ENST00000561395	SMCR5	Q8TEV8	140 aa		4.65	□□□□□ -1.67
TPM1-231	ENST00000561395	LRP1	Q07954	4544 aa	Known RBP	4.65	□□□□□ -1.67
TPM1-231	ENST00000561395	ERC2-IT1	O76042	136 aa		4.64	□□□□□ -1.67
TPM1-231	ENST00000561395	OXT	P01178	125 aa		4.64	□□□□□ -1.67
TPM1-231	ENST00000561395	LINC01547	P58512	204 aa	Predicted RBP	4.64	□□□□□ -1.67
TPM1-231	ENST00000561395	IGLV5-48	A0A075B6I7	105 aa		4.63	□□□□□ -1.67
TPM1-231	ENST00000561395	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.63	□□□□□ -1.67
TPM1-231	ENST00000561395	PCP4	P48539	62 aa		4.63	□□□□□ -1.67
TPM1-231	ENST00000561395	KRTAP13-1	Q8IUC0	172 aa		4.63	□□□□□ -1.67
TPM1-231	ENST00000561395	C14orf132	Q9NPU4	83 aa		4.63	□□□□□ -1.67
TPM1-231	ENST00000561395	LAMTOR3	Q9UHA4	124 aa		4.63	□□□□□ -1.67
TPM1-231	ENST00000561395		A0A1B0GV72	72 aa		4.62	□□□□□ -1.67
TPM1-231	ENST00000561395	UBE2A	P49459	152 aa		4.62	□□□□□ -1.67
TPM1-231	ENST00000561395		Q8N377	158 aa		4.62	□□□□□ -1.67
TPM1-231	ENST00000561395	ST20-AS1	Q8NBB2	130 aa		4.62	□□□□□ -1.67
TPM1-231	ENST00000561395	PSORS1C2	Q9UIG4	136 aa		4.62	□□□□□ -1.67
TPM1-231	ENST00000561395	FAT3	Q8TDW7	4589 aa		4.61	□□□□□ -1.67
TPM1-231	ENST00000561395	FAM240A	A0A1B0GVK7	77 aa		4.61	□□□□□ -1.67
TPM1-231	ENST00000561395	NDUFV3	P56181	108 aa	Known RBP	4.61	□□□□□ -1.67
TPM1-231	ENST00000561395	SCX	Q7RTU7	201 aa		4.61	□□□□□ -1.67
TPM1-231	ENST00000561395	DEFB105A	Q8NG35	78 aa		4.61	□□□□□ -1.67
TPM1-231	ENST00000561395	CIRBP-AS1	Q8TBR5	109 aa		4.61	□□□□□ -1.67
TPM1-231	ENST00000561395	HIGD2A	Q9BW72	106 aa		4.61	□□□□□ -1.67
TPM1-231	ENST00000561395	LOC110117498	A0A087WWA1	95 aa		4.6	□□□□□ -1.67
TPM1-231	ENST00000561395	RBM3	P98179	157 aa	Known RBP	4.6	□□□□□ -1.67
TPM1-231	ENST00000561395	C1orf137	Q5JT78	98 aa		4.59	□□□□□ -1.67
TPM1-231	ENST00000561395	GAGE2A	Q6NT46	116 aa		4.59	□□□□□ -1.67
TPM1-231	ENST00000561395	VPS25	Q9BRG1	176 aa		4.59	□□□□□ -1.67
TPM1-231	ENST00000561395	PKHD1L1	Q86WI1	4243 aa		4.58	□□□□□ -1.68
TPM1-231	ENST00000561395	TRBV7-4	A0A0J9YYF1	115 aa		4.58	□□□□□ -1.68
TPM1-231	ENST00000561395	CCK	P06307	115 aa		4.58	□□□□□ -1.68
TPM1-231	ENST00000561395	ACYP1	P07311	99 aa		4.58	□□□□□ -1.68
TPM1-231	ENST00000561395	PDE6G	P18545	87 aa		4.58	□□□□□ -1.68
TPM1-231	ENST00000561395		Q6ZQT0	140 aa		4.58	□□□□□ -1.68
TPM1-231	ENST00000561395	SMIM29	Q86T20	159 aa		4.58	□□□□□ -1.68
TPM1-231	ENST00000561395	C3orf22	Q8N5N4	141 aa		4.58	□□□□□ -1.68
TPM1-231	ENST00000561395	DSCR8	Q96T75	97 aa		4.58	□□□□□ -1.68
TPM1-231	ENST00000561395	LRP2	P98164	4655 aa		4.58	□□□□□ -1.68
TPM1-231	ENST00000561395	SPRR1B	P22528	89 aa		4.57	□□□□□ -1.68
TPM1-231	ENST00000561395	ZNF861P	O60384	105 aa		4.56	□□□□□ -1.68
TPM1-231	ENST00000561395	IGLV7-43	P04211	117 aa		4.56	□□□□□ -1.68
TPM1-231	ENST00000561395	KRTAP9-2	Q9BYQ4	174 aa		4.56	□□□□□ -1.68
TPM1-231	ENST00000561395		F8WEM9	126 aa		4.55	□□□□□ -1.68
TPM1-231	ENST00000561395	SPRR4	Q96PI1	79 aa		4.55	□□□□□ -1.68
TPM1-231	ENST00000561395	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.55	□□□□□ -1.68
TPM1-231	ENST00000561395	IGLV8-61	A0A075B6I0	122 aa		4.54	□□□□□ -1.68
TPM1-231	ENST00000561395	RPL37A	P61513	92 aa	Known RBP	4.54	□□□□□ -1.68
TPM1-231	ENST00000561395	LINC00483	Q53H64	154 aa		4.54	□□□□□ -1.68
TPM1-231	ENST00000561395	LINC00846	Q9NV44	126 aa		4.54	□□□□□ -1.68
TPM1-231	ENST00000561395	KRTAP9-6	A0A140TA67	174 aa		4.53	□□□□□ -1.68
TPM1-231	ENST00000561395	KRTAP10-4	P60372	401 aa	Predicted RBP	4.53	□□□□□ -1.68
TPM1-231	ENST00000561395	MT-ATP8	P03928	68 aa		4.52	□□□□□ -1.69
TPM1-231	ENST00000561395	SIGMAR1	Q99720	223 aa		4.52	□□□□□ -1.69
TPM1-231	ENST00000561395	TNXB	P22105	4242 aa		4.52	□□□□□ -1.69
TPM1-231	ENST00000561395	LINC00643	Q86TS7	51 aa		4.51	□□□□□ -1.69
TPM1-231	ENST00000561395		Q8NBF4	154 aa		4.51	□□□□□ -1.69
TPM1-231	ENST00000561395	KRTAP4-8	Q9BYQ9	185 aa		4.51	□□□□□ -1.69
TPM1-231	ENST00000561395		A0A1W2PNM2	257 aa		4.5	□□□□□ -1.69
TPM1-231	ENST00000561395		Q6JHZ5	121 aa		4.5	□□□□□ -1.69
TPM1-231	ENST00000561395	IGFL1	Q6UW32	110 aa		4.5	□□□□□ -1.69
TPM1-231	ENST00000561395		A0A1B0GW54	56 aa		4.49	□□□□□ -1.69
TPM1-231	ENST00000561395	MT1HL1	P0DM35	61 aa		4.49	□□□□□ -1.69
TPM1-231	ENST00000561395	UBL5	Q9BZL1	73 aa		4.49	□□□□□ -1.69
TPM1-231	ENST00000561395	IGLV9-49	A0A0B4J1Y8	123 aa		4.48	□□□□□ -1.69
TPM1-231	ENST00000561395	KRTAP23-1	A1A580	65 aa		4.48	□□□□□ -1.69
TPM1-231	ENST00000561395		Q6ZVQ6	151 aa		4.48	□□□□□ -1.69
TPM1-231	ENST00000561395	KRTAP19-1	Q8IUB9	90 aa		4.48	□□□□□ -1.69
TPM1-231	ENST00000561395	ANAPC11	Q9NYG5	84 aa		4.48	□□□□□ -1.69
TPM1-231	ENST00000561395		A0A0G2JQZ4	141 aa		4.47	□□□□□ -1.69
TPM1-231	ENST00000561395	TRBV7-7	A0A0K0K1E9	115 aa		4.47	□□□□□ -1.69
TPM1-231	ENST00000561395	CRYGA	P11844	174 aa		4.47	□□□□□ -1.69
TPM1-231	ENST00000561395	C9orf153	Q5TBE3	101 aa		4.47	□□□□□ -1.69
TPM1-231	ENST00000561395	ATP5EP2	Q5VTU8	51 aa		4.47	□□□□□ -1.69
TPM1-231	ENST00000561395		Q6Q795	121 aa		4.47	□□□□□ -1.69
TPM1-231	ENST00000561395	MOBP	Q13875	183 aa		4.46	□□□□□ -1.7
TPM1-231	ENST00000561395	IGKV3D-7	A0A0C4DH55	119 aa		4.45	□□□□□ -1.7
TPM1-231	ENST00000561395		A0A0U1RQV1	116 aa		4.45	□□□□□ -1.7
TPM1-231	ENST00000561395	NREP	Q16612	68 aa		4.45	□□□□□ -1.7
TPM1-231	ENST00000561395	FAM229B	Q4G0N7	80 aa		4.45	□□□□□ -1.7
TPM1-231	ENST00000561395	KRTAP1-4	P0C5Y4	121 aa		4.44	□□□□□ -1.7
TPM1-231	ENST00000561395	SCGB1A1	P11684	91 aa		4.44	□□□□□ -1.7
TPM1-231	ENST00000561395	SPINK6	Q6UWN8	80 aa		4.44	□□□□□ -1.7
TPM1-231	ENST00000561395	KRTAP4-12	Q9BQ66	201 aa		4.44	□□□□□ -1.7
TPM1-231	ENST00000561395	IMUP	Q9GZP8	106 aa		4.44	□□□□□ -1.7
TPM1-231	ENST00000561395		A0A087WSZ3	146 aa		4.43	□□□□□ -1.7
TPM1-231	ENST00000561395	CXCL6	P80162	114 aa		4.43	□□□□□ -1.7
TPM1-231	ENST00000561395		A0A087X002	238 aa		4.42	□□□□□ -1.7

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