RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 FAM229AH3BQW9 127 aa6.25□□□□□ -1.41
USP3-219ENST00000561326 PLA2G1BP04054 148 aaKnown RBP6.24□□□□□ -1.41
USP3-219ENST00000561326 C14orf132Q9NPU4 83 aa6.24□□□□□ -1.41
USP3-219ENST00000561326 LRP1BQ9NZR2 4599 aa6.24□□□□□ -1.41
USP3-219ENST00000561326 DYNC1H1Q14204 4646 aaKnown RBP6.24□□□□□ -1.41
USP3-219ENST00000561326 A0A1B0GV72 72 aa6.23□□□□□ -1.41
USP3-219ENST00000561326 LINC00483Q53H64 154 aa6.23□□□□□ -1.41
USP3-219ENST00000561326 SPINK6Q6UWN8 80 aa6.23□□□□□ -1.41
USP3-219ENST00000561326 C3orf22Q8N5N4 141 aa6.23□□□□□ -1.41
USP3-219ENST00000561326 LOC110117498A0A087WWA1 95 aa6.22□□□□□ -1.41
USP3-219ENST00000561326 SMIM29Q86T20 159 aa6.22□□□□□ -1.41
USP3-219ENST00000561326 CCKP06307 115 aa6.21□□□□□ -1.42
USP3-219ENST00000561326 Q6JHZ5 121 aa6.21□□□□□ -1.42
USP3-219ENST00000561326 BIRC6Q9NR09 4857 aa6.2□□□□□ -1.42
USP3-219ENST00000561326 IGLV8-61A0A075B6I0 122 aa6.2□□□□□ -1.42
USP3-219ENST00000561326 TRBV7-4A0A0J9YYF1 115 aa6.2□□□□□ -1.42
USP3-219ENST00000561326 ACYP1P07311 99 aa6.2□□□□□ -1.42
USP3-219ENST00000561326 FAM229BQ4G0N7 80 aa6.19□□□□□ -1.42
USP3-219ENST00000561326 Q6ZQT0 140 aa6.19□□□□□ -1.42
USP3-219ENST00000561326 VPS13BQ7Z7G8 4022 aa6.19□□□□□ -1.42
USP3-219ENST00000561326 IGLV9-49A0A0B4J1Y8 123 aa6.18□□□□□ -1.42
USP3-219ENST00000561326 FAM240AA0A1B0GVK7 77 aa6.18□□□□□ -1.42
USP3-219ENST00000561326 C9orf153Q5TBE3 101 aa6.18□□□□□ -1.42
USP3-219ENST00000561326 VPS25Q9BRG1 176 aa6.18□□□□□ -1.42
USP3-219ENST00000561326 A0A1B0GW54 56 aa6.17□□□□□ -1.42
USP3-219ENST00000561326 APOBP04114 4563 aaKnown RBP6.16□□□□□ -1.42
USP3-219ENST00000561326 EPPK1P58107 5090 aaKnown RBP6.16□□□□□ -1.42
USP3-219ENST00000561326 CRYGAP11844 174 aa6.16□□□□□ -1.42
USP3-219ENST00000561326 ANAPC11Q9NYG5 84 aa6.16□□□□□ -1.42
USP3-219ENST00000561326 IGFL1Q6UW32 110 aa6.15□□□□□ -1.42
USP3-219ENST00000561326 SSBP3-AS1Q7Z2R9 100 aa6.15□□□□□ -1.42
USP3-219ENST00000561326 Q8NBF4 154 aa6.15□□□□□ -1.42
USP3-219ENST00000561326 KRTAP10-4P60372 401 aaPredicted RBP6.14□□□□□ -1.43
USP3-219ENST00000561326 MOBPQ13875 183 aa6.14□□□□□ -1.43
USP3-219ENST00000561326 Q5VSD8 79 aa6.14□□□□□ -1.43
USP3-219ENST00000561326 A0A1W2PNM2 257 aa6.12□□□□□ -1.43
USP3-219ENST00000561326 Q8N1X5 172 aa6.12□□□□□ -1.43
USP3-219ENST00000561326 KRTAP1-4P0C5Y4 121 aa6.11□□□□□ -1.43
USP3-219ENST00000561326 Q6Q795 121 aa6.11□□□□□ -1.43
USP3-219ENST00000561326 KRTAP17-1Q9BYP8 105 aa6.11□□□□□ -1.43
USP3-219ENST00000561326 UBL5Q9BZL1 73 aa6.11□□□□□ -1.43
USP3-219ENST00000561326 LINC00846Q9NV44 126 aa6.1□□□□□ -1.43
USP3-219ENST00000561326 A0A087X002 238 aa6.09□□□□□ -1.43
USP3-219ENST00000561326 A0A0G2JQZ4 141 aa6.09□□□□□ -1.43
USP3-219ENST00000561326 NREPQ16612 68 aa6.09□□□□□ -1.43
USP3-219ENST00000561326 TYMSOSQ8TAI1 123 aa6.09□□□□□ -1.43
USP3-219ENST00000561326 CD164Q04900 197 aa6.08□□□□□ -1.44
USP3-219ENST00000561326 C4orf48Q5BLP8 95 aa6.08□□□□□ -1.44
USP3-219ENST00000561326 HSPG2P98160 4391 aa6.07□□□□□ -1.44
USP3-219ENST00000561326 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
USP3-219ENST00000561326 LINC00643Q86TS7 51 aa6.07□□□□□ -1.44
USP3-219ENST00000561326 PKHD1L1Q86WI1 4243 aa6.06□□□□□ -1.44
USP3-219ENST00000561326 TRBV7-7A0A0K0K1E9 115 aa6.06□□□□□ -1.44
USP3-219ENST00000561326 CDIP1Q9H305 208 aa6.06□□□□□ -1.44
USP3-219ENST00000561326 SS18L2Q9UHA2 77 aa6.06□□□□□ -1.44
USP3-219ENST00000561326 A0A087WSZ3 146 aa6.05□□□□□ -1.44
USP3-219ENST00000561326 HRCT1Q6UXD1 115 aa6.05□□□□□ -1.44
USP3-219ENST00000561326 Q6ZVQ6 151 aa6.05□□□□□ -1.44
USP3-219ENST00000561326 PRR26Q8N8Z3 221 aa6.05□□□□□ -1.44
USP3-219ENST00000561326 FAT1Q14517 4588 aa6.05□□□□□ -1.44
USP3-219ENST00000561326 SPAG11AQ6PDA7 123 aa6.04□□□□□ -1.44
USP3-219ENST00000561326 KRTAP3-3Q9BYR6 98 aa6.04□□□□□ -1.44
USP3-219ENST00000561326 KRTAP3-2Q9BYR7 98 aa6.04□□□□□ -1.44
USP3-219ENST00000561326 ATP5EP2Q5VTU8 51 aa6.02□□□□□ -1.45
USP3-219ENST00000561326 SIGMAR1Q99720 223 aa6.02□□□□□ -1.45
USP3-219ENST00000561326 SPINK1P00995 79 aa6.01□□□□□ -1.45
USP3-219ENST00000561326 LINC00304Q8N9R0 145 aa6.01□□□□□ -1.45
USP3-219ENST00000561326 RYR1P21817 5038 aa6.01□□□□□ -1.45
USP3-219ENST00000561326 BPY2O14599 106 aa6□□□□□ -1.45
USP3-219ENST00000561326 CXCL6P80162 114 aa6□□□□□ -1.45
USP3-219ENST00000561326 LIMD2Q9BT23 127 aa6□□□□□ -1.45
USP3-219ENST00000561326 J3KT08 172 aa5.98□□□□□ -1.45
USP3-219ENST00000561326 Q5XG85 94 aa5.98□□□□□ -1.45
USP3-219ENST00000561326 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
USP3-219ENST00000561326 IGKV3D-7A0A0C4DH55 119 aa5.97□□□□□ -1.45
USP3-219ENST00000561326 MT-ATP8P03928 68 aa5.97□□□□□ -1.45
USP3-219ENST00000561326 RPS29P62273 56 aaKnown RBP5.97□□□□□ -1.45
USP3-219ENST00000561326 ASB16-AS1Q495Z4 193 aa5.97□□□□□ -1.45
USP3-219ENST00000561326 IMUPQ9GZP8 106 aa5.97□□□□□ -1.45
USP3-219ENST00000561326 KRTAP10-8P60410 259 aa5.96□□□□□ -1.46
USP3-219ENST00000561326 LINC00472Q9H8W2 130 aa5.96□□□□□ -1.46
USP3-219ENST00000561326 FLG2Q5D862 2391 aaPredicted RBP5.96□□□□□ -1.46
USP3-219ENST00000561326 OXTP01178 125 aa5.95□□□□□ -1.46
USP3-219ENST00000561326 NDUFB1O75438 58 aa5.94□□□□□ -1.46
USP3-219ENST00000561326 IGKV4-1P06312 121 aa5.94□□□□□ -1.46
USP3-219ENST00000561326 HIST1H4AP62805 103 aaKnown RBP5.94□□□□□ -1.46
USP3-219ENST00000561326 DEFB116Q30KQ4 102 aa5.94□□□□□ -1.46
USP3-219ENST00000561326 Q96NJ1 140 aa5.91□□□□□ -1.46
USP3-219ENST00000561326 HERC2O95714 4834 aa5.91□□□□□ -1.46
USP3-219ENST00000561326 A8MWP4 228 aa5.9□□□□□ -1.46
USP3-219ENST00000561326 DSCR10P59022 87 aa5.9□□□□□ -1.46
USP3-219ENST00000561326 DMBT1Q9UGM3 2413 aaPredicted RBP5.89□□□□□ -1.47
USP3-219ENST00000561326 C1orf195Q5TG92 126 aa5.89□□□□□ -1.47
USP3-219ENST00000561326 KRTAP4-5Q9BYR2 181 aa5.89□□□□□ -1.47
USP3-219ENST00000561326 PRR15Q8IV56 129 aa5.88□□□□□ -1.47
USP3-219ENST00000561326 PCLOQ9Y6V0 5065 aa5.88□□□□□ -1.47
USP3-219ENST00000561326 KRTAP29-1A8MX34 341 aaPredicted RBP5.87□□□□□ -1.47
USP3-219ENST00000561326 K7EQZ3 153 aa5.87□□□□□ -1.47
USP3-219ENST00000561326 Q8N9L7 120 aa5.87□□□□□ -1.47
USP3-219ENST00000561326 A0A1B0GVX0 72 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms