RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 KRTAP10-6P60371 365 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-215ENST00000561187 FLGP20930 4061 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-215ENST00000561187 LORP23490 312 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-215ENST00000561187 Q6ZQY7 126 aa14.33□□□□□ -0.12
SNRPA1-215ENST00000561187 LINC00575Q6W349 94 aa14.32□□□□□ -0.12
SNRPA1-215ENST00000561187 VAMP3Q15836 100 aa14.31□□□□□ -0.12
SNRPA1-215ENST00000561187 hADV29S1A0JD25 119 aa14.27□□□□□ -0.13
SNRPA1-215ENST00000561187 IGFL1Q6UW32 110 aa14.26□□□□□ -0.13
SNRPA1-215ENST00000561187 CLEC2BQ92478 149 aa14.26□□□□□ -0.13
SNRPA1-215ENST00000561187 C12orf57Q99622 126 aa14.26□□□□□ -0.13
SNRPA1-215ENST00000561187 TRBV7-7A0A0K0K1E9 115 aa14.24□□□□□ -0.13
SNRPA1-215ENST00000561187 SNRPEP62304 92 aaKnown RBP14.24□□□□□ -0.13
SNRPA1-215ENST00000561187 Q6JHZ5 121 aa14.22□□□□□ -0.13
SNRPA1-215ENST00000561187 OBSCN-AS1Q96MR7 158 aa14.22□□□□□ -0.13
SNRPA1-215ENST00000561187 HSBP1L1C9JCN9 74 aa14.2□□□□□ -0.14
SNRPA1-215ENST00000561187 OCIAD2Q56VL3 154 aa14.18□□□□□ -0.14
SNRPA1-215ENST00000561187 HIST3H2BBQ8N257 126 aa14.18□□□□□ -0.14
SNRPA1-215ENST00000561187 HIST1H2BLQ99880 126 aa14.18□□□□□ -0.14
SNRPA1-215ENST00000561187 H3BUT2 72 aa14.17□□□□□ -0.14
SNRPA1-215ENST00000561187 S100A2P29034 98 aa14.17□□□□□ -0.14
SNRPA1-215ENST00000561187 Q6Q795 121 aa14.17□□□□□ -0.14
SNRPA1-215ENST00000561187 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.13□□□□□ -0.15
SNRPA1-215ENST00000561187 ATP11AUNQ6ZP68 121 aa14.11□□□□□ -0.15
SNRPA1-215ENST00000561187 SNHG12Q9BXW3 62 aa14.11□□□□□ -0.15
SNRPA1-215ENST00000561187 HIST1H4GQ99525 98 aa14.1□□□□□ -0.15
SNRPA1-215ENST00000561187 BVES-AS1Q5T3Y7 98 aa14.08□□□□□ -0.16
SNRPA1-215ENST00000561187 Q75L30 129 aa14.08□□□□□ -0.16
SNRPA1-215ENST00000561187 LST1O00453 97 aa14.07□□□□□ -0.16
SNRPA1-215ENST00000561187 Q96NJ1 140 aa14.05□□□□□ -0.16
SNRPA1-215ENST00000561187 PPDPFLQ8WWR9 84 aa14.02□□□□□ -0.17
SNRPA1-215ENST00000561187 SCGB1D1O95968 90 aa14□□□□□ -0.17
SNRPA1-215ENST00000561187 S100A6P06703 90 aa13.97□□□□□ -0.17
SNRPA1-215ENST00000561187 COX8AP10176 69 aa13.96□□□□□ -0.17
SNRPA1-215ENST00000561187 RAB37Q96AX2 223 aa13.94□□□□□ -0.18
SNRPA1-215ENST00000561187 FAM218AQ96MZ4 157 aa13.94□□□□□ -0.18
SNRPA1-215ENST00000561187 SS18L2Q9UHA2 77 aa13.94□□□□□ -0.18
SNRPA1-215ENST00000561187 CFC1P0CG37 223 aa13.93□□□□□ -0.18
SNRPA1-215ENST00000561187 A0A087WSZ3 146 aa13.91□□□□□ -0.18
SNRPA1-215ENST00000561187 NDUFV3P56181 108 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-215ENST00000561187 C14orf144Q96I85 54 aa13.89□□□□□ -0.19
SNRPA1-215ENST00000561187 TEN1Q86WV5 123 aa13.88□□□□□ -0.19
SNRPA1-215ENST00000561187 C20orf166-AS1Q96NR2 134 aa13.88□□□□□ -0.19
SNRPA1-215ENST00000561187 DSCR10P59022 87 aa13.86□□□□□ -0.19
SNRPA1-215ENST00000561187 A8MUU9 505 aa13.85□□□□□ -0.19
SNRPA1-215ENST00000561187 SNCGO76070 127 aa13.85□□□□□ -0.19
SNRPA1-215ENST00000561187 DLEU1O43261 78 aa13.83□□□□□ -0.2
SNRPA1-215ENST00000561187 SIGMAR1Q99720 223 aa13.83□□□□□ -0.2
SNRPA1-215ENST00000561187 PAM16Q9Y3D7 125 aa13.83□□□□□ -0.2
SNRPA1-215ENST00000561187 A0A0B4J2C4 111 aa13.82□□□□□ -0.2
SNRPA1-215ENST00000561187 H0YGX0 51 aa13.82□□□□□ -0.2
SNRPA1-215ENST00000561187 H3BMG7 143 aa13.82□□□□□ -0.2
SNRPA1-215ENST00000561187 FABP2P12104 132 aa13.82□□□□□ -0.2
SNRPA1-215ENST00000561187 A0A1B0GV72 72 aa13.79□□□□□ -0.2
SNRPA1-215ENST00000561187 TRBV20-1A0A075B6N2 111 aa13.78□□□□□ -0.2
SNRPA1-215ENST00000561187 SPATA45Q537H7 98 aa13.78□□□□□ -0.2
SNRPA1-215ENST00000561187 C2orf91Q6ZV80 131 aa13.77□□□□□ -0.21
SNRPA1-215ENST00000561187 HIGD1BQ9P298 99 aa13.75□□□□□ -0.21
SNRPA1-215ENST00000561187 A0A1W2PNM2 257 aa13.74□□□□□ -0.21
SNRPA1-215ENST00000561187 KRTAP9-8Q9BYQ0 159 aa13.73□□□□□ -0.21
SNRPA1-215ENST00000561187 USH2AO75445 5202 aa13.71□□□□□ -0.21
SNRPA1-215ENST00000561187 CEND1Q8N111 149 aa13.7□□□□□ -0.22
SNRPA1-215ENST00000561187 S100A1P23297 94 aa13.69□□□□□ -0.22
SNRPA1-215ENST00000561187 VAMP8Q9BV40 100 aa13.69□□□□□ -0.22
SNRPA1-215ENST00000561187 PRO1854Q9UHT4 67 aa13.69□□□□□ -0.22
SNRPA1-215ENST00000561187 SSPOA2VEC9 5147 aa13.68□□□□□ -0.22
SNRPA1-215ENST00000561187 TRIAP1O43715 76 aa13.68□□□□□ -0.22
SNRPA1-215ENST00000561187 FAM236DA0A1B0GTK5 79 aa13.67□□□□□ -0.22
SNRPA1-215ENST00000561187 KRTAP16-1A8MUX0 517 aa13.67□□□□□ -0.22
SNRPA1-215ENST00000561187 IGKV4-1P06312 121 aa13.67□□□□□ -0.22
SNRPA1-215ENST00000561187 FAM236CP0DP71 79 aa13.67□□□□□ -0.22
SNRPA1-215ENST00000561187 FXYD2P54710 66 aa13.67□□□□□ -0.22
SNRPA1-215ENST00000561187 A0A1B0GX51 115 aa13.66□□□□□ -0.22
SNRPA1-215ENST00000561187 GHRHP01286 108 aa13.64□□□□□ -0.23
SNRPA1-215ENST00000561187 LINC00313P59037 77 aa13.64□□□□□ -0.23
SNRPA1-215ENST00000561187 DEFB116Q30KQ4 102 aa13.64□□□□□ -0.23
SNRPA1-215ENST00000561187 TMEM238LA0A1B0GVL6 79 aa13.63□□□□□ -0.23
SNRPA1-215ENST00000561187 A6NJY4 79 aa13.63□□□□□ -0.23
SNRPA1-215ENST00000561187 NOTCH2NLQ7Z3S9 236 aa13.62□□□□□ -0.23
SNRPA1-215ENST00000561187 ANKRD29Q8N6D5 301 aa13.62□□□□□ -0.23
SNRPA1-215ENST00000561187 DNAL4O96015 105 aa13.59□□□□□ -0.23
SNRPA1-215ENST00000561187 ORMDL1Q9P0S3 153 aa13.57□□□□□ -0.24
SNRPA1-215ENST00000561187 K7ERJ3 54 aa13.56□□□□□ -0.24
SNRPA1-215ENST00000561187 TRBV7-4A0A0J9YYF1 115 aa13.55□□□□□ -0.24
SNRPA1-215ENST00000561187 MT2AP02795 61 aa13.55□□□□□ -0.24
SNRPA1-215ENST00000561187 IGHV6-1A0A0B4J1U7 121 aa13.54□□□□□ -0.24
SNRPA1-215ENST00000561187 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-215ENST00000561187 PSMB2P49721 201 aa13.54□□□□□ -0.24
SNRPA1-215ENST00000561187 CCKP06307 115 aa13.51□□□□□ -0.25
SNRPA1-215ENST00000561187 HRES1P13985 223 aa13.51□□□□□ -0.25
SNRPA1-215ENST00000561187 TRACP01848 142 aa13.5□□□□□ -0.25
SNRPA1-215ENST00000561187 LINC00472Q9H8W2 130 aa13.49□□□□□ -0.25
SNRPA1-215ENST00000561187 RBM12B-AS1Q9P1G2 102 aa13.49□□□□□ -0.25
SNRPA1-215ENST00000561187 KRTAP9-7A8MTY7 169 aa13.47□□□□□ -0.25
SNRPA1-215ENST00000561187 VPS25Q9BRG1 176 aa13.47□□□□□ -0.25
SNRPA1-215ENST00000561187 MT1FP04733 61 aa13.46□□□□□ -0.25
SNRPA1-215ENST00000561187 MPLKIPQ8TAP9 179 aa13.45□□□□□ -0.26
SNRPA1-215ENST00000561187 TMEM256-PLSCR3K7ERE1 68 aa13.44□□□□□ -0.26
SNRPA1-215ENST00000561187 HSD52Q0P140 79 aa13.43□□□□□ -0.26
SNRPA1-215ENST00000561187 H3BQ85 93 aa13.41□□□□□ -0.26
SNRPA1-215ENST00000561187 COX6CP09669 75 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms