RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 TSC2P49815 1807 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 TRAV21A0A0B4J279 112 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 SPTY2D1-AS1A0A0U1RR47 76 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 G3V318 75 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 SFTA3P0C7M3 94 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 KRTAP10-10P60014 251 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 DEFB133Q30KQ1 61 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 PIGYQ3MUY2 71 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 SPINK9Q5DT21 86 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 KRTAP4-2Q9BYR5 136 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 LINC00472Q9H8W2 130 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 COL12A1Q99715 3063 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 MTORP42345 2549 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 BIRC6Q9NR09 4857 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 WDFY3Q8IZQ1 3526 aa0.87□□□□□ -2.27
RTF1-207ENST00000561076 USP9YO00507 2555 aaPredicted RBP0.87□□□□□ -2.27
RTF1-207ENST00000561076 NBPF19A0A087WUL8 3843 aa0.87□□□□□ -2.27
RTF1-207ENST00000561076 FXYD6-FXYD2A0A087WZ82 144 aa0.87□□□□□ -2.27
RTF1-207ENST00000561076 ARL14EPLP0DKL9 152 aa0.87□□□□□ -2.27
RTF1-207ENST00000561076 SPINK7P58062 85 aa0.87□□□□□ -2.27
RTF1-207ENST00000561076 NREPQ16612 68 aa0.87□□□□□ -2.27
RTF1-207ENST00000561076 USMG5Q96IX5 58 aa0.87□□□□□ -2.27
RTF1-207ENST00000561076 SMR3AQ99954 134 aa0.87□□□□□ -2.27
RTF1-207ENST00000561076 SPTBN1Q01082 2364 aaKnown RBP0.87□□□□□ -2.27
RTF1-207ENST00000561076 PDZD2O15018 2839 aa0.87□□□□□ -2.27
RTF1-207ENST00000561076 RELNP78509 3460 aa0.87□□□□□ -2.27
RTF1-207ENST00000561076 NBASA2RRP1 2371 aa0.86□□□□□ -2.27
RTF1-207ENST00000561076 MYO7BQ6PIF6 2116 aa0.86□□□□□ -2.27
RTF1-207ENST00000561076 COX7BP24311 80 aa0.86□□□□□ -2.27
RTF1-207ENST00000561076 KRTAP10-7P60409 375 aaPredicted RBP0.86□□□□□ -2.27
RTF1-207ENST00000561076 KRTAP13-1Q8IUC0 172 aa0.86□□□□□ -2.27
RTF1-207ENST00000561076 UBL5Q9BZL1 73 aa0.86□□□□□ -2.27
RTF1-207ENST00000561076 CRIPTQ9P021 101 aa0.86□□□□□ -2.27
RTF1-207ENST00000561076 U3KQA8 63 aa0.86□□□□□ -2.27
RTF1-207ENST00000561076 MED13LQ71F56 2210 aa0.86□□□□□ -2.27
RTF1-207ENST00000561076 UTP20O75691 2785 aaKnown RBP0.86□□□□□ -2.27
RTF1-207ENST00000561076 RYR1P21817 5038 aa0.86□□□□□ -2.27
RTF1-207ENST00000561076 ABCA1O95477 2261 aa0.86□□□□□ -2.27
RTF1-207ENST00000561076 CRYBG3Q68DQ2 2970 aa0.86□□□□□ -2.27
RTF1-207ENST00000561076 MGAQ8IWI9 3026 aa0.86□□□□□ -2.27
RTF1-207ENST00000561076 HIVEP1P15822 2718 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 I3L3M4 83 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 IFI6P09912 130 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 C3orf79P0CE67 100 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 LAMA1P25391 3075 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 COX6A2Q02221 97 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 CSPG4Q6UVK1 2322 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 FAM103A1Q9BTL3 118 aaKnown RBP0.85□□□□□ -2.27
RTF1-207ENST00000561076 PLAC8Q9NZF1 115 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 NF1P21359 2839 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 TLN2Q9Y4G6 2542 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 DNAJC13O75165 2243 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 ITPR2Q14571 2701 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 ATMQ13315 3056 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 OTOGQ6ZRI0 2925 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 CELSR2Q9HCU4 2923 aa0.85□□□□□ -2.27
RTF1-207ENST00000561076 RYR3Q15413 4870 aa0.84□□□□□ -2.27
RTF1-207ENST00000561076 NCOA6Q14686 2063 aaPredicted RBP0.84□□□□□ -2.27
RTF1-207ENST00000561076 HIVEP2P31629 2446 aa0.84□□□□□ -2.27
RTF1-207ENST00000561076 HIVEP3Q5T1R4 2406 aa0.84□□□□□ -2.27
RTF1-207ENST00000561076 K7EIL1 84 aa0.84□□□□□ -2.27
RTF1-207ENST00000561076 TP53AIP1Q9HCN2 124 aa0.84□□□□□ -2.27
RTF1-207ENST00000561076 ADGRG4Q8IZF6 3080 aa0.84□□□□□ -2.28
RTF1-207ENST00000561076 SPENQ96T58 3664 aaKnown RBP0.84□□□□□ -2.28
RTF1-207ENST00000561076 CSMD1Q96PZ7 3565 aa0.83□□□□□ -2.28
RTF1-207ENST00000561076 CELSR1Q9NYQ6 3014 aa0.83□□□□□ -2.28
RTF1-207ENST00000561076 NIPBLQ6KC79 2804 aaeCLIP0.83□□□□□ -2.286e-6■■■□□ 16.7
RTF1-207ENST00000561076 MRPL33O75394 65 aaKnown RBP0.83□□□□□ -2.28
RTF1-207ENST00000561076 LCE1EQ5T753 118 aa0.83□□□□□ -2.28
RTF1-207ENST00000561076 CNFNQ9BYD5 112 aa0.83□□□□□ -2.28
RTF1-207ENST00000561076 LCE3DQ9BYE3 92 aa0.83□□□□□ -2.28
RTF1-207ENST00000561076 PRO0255Q9UI72 69 aa0.83□□□□□ -2.28
RTF1-207ENST00000561076 LRBAP50851 2863 aa0.83□□□□□ -2.28
RTF1-207ENST00000561076 BOD1L1Q8NFC6 3051 aa0.83□□□□□ -2.28
RTF1-207ENST00000561076 KNL1Q8NG31 2342 aa0.83□□□□□ -2.28
RTF1-207ENST00000561076 CENPEQ02224 2701 aa0.82□□□□□ -2.28
RTF1-207ENST00000561076 AKAP9Q99996 3911 aa0.82□□□□□ -2.28
RTF1-207ENST00000561076 APCP25054 2843 aa0.82□□□□□ -2.28
RTF1-207ENST00000561076 LINC00959A0A1B0GUT2 108 aa0.82□□□□□ -2.28
RTF1-207ENST00000561076 LINC01549A6NIU2 74 aa0.82□□□□□ -2.28
RTF1-207ENST00000561076 NDUFA4O00483 81 aa0.82□□□□□ -2.28
RTF1-207ENST00000561076 STATHP02808 62 aa0.82□□□□□ -2.28
RTF1-207ENST00000561076 FCER1GP30273 86 aa0.82□□□□□ -2.28
RTF1-207ENST00000561076 SERF2P84101 59 aa0.82□□□□□ -2.28
RTF1-207ENST00000561076 ENHOQ6UWT2 76 aa0.82□□□□□ -2.28
RTF1-207ENST00000561076 PKDREJQ9NTG1 2253 aa0.82□□□□□ -2.28
RTF1-207ENST00000561076 TGP01266 2768 aa0.82□□□□□ -2.28
RTF1-207ENST00000561076 BSNQ9UPA5 3926 aa0.82□□□□□ -2.28
RTF1-207ENST00000561076 CCL22O00626 93 aa0.81□□□□□ -2.28
RTF1-207ENST00000561076 KRTAP12-3P60328 96 aa0.81□□□□□ -2.28
RTF1-207ENST00000561076 TFF3Q07654 80 aa0.81□□□□□ -2.28
RTF1-207ENST00000561076 Q8IZM0 81 aa0.81□□□□□ -2.28
RTF1-207ENST00000561076 NMES1Q9C002 83 aa0.81□□□□□ -2.28
RTF1-207ENST00000561076 CADP27708 2225 aa0.81□□□□□ -2.28
RTF1-207ENST00000561076 CSMD2Q7Z408 3487 aa0.81□□□□□ -2.28
RTF1-207ENST00000561076 TENM1Q9UKZ4 2725 aa0.8□□□□□ -2.28
RTF1-207ENST00000561076 ACANP16112 2415 aa0.8□□□□□ -2.28
RTF1-207ENST00000561076 MGAM2Q2M2H8 2515 aa0.8□□□□□ -2.28
RTF1-207ENST00000561076 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.8□□□□□ -2.282e-6■■■■□ 24
RTF1-207ENST00000561076 CPSF4LA6NMK7 179 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms