RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PPDPFLQ8WWR9 84 aa8.94□□□□□ -0.98
LMX1B-204ENST00000561065 CFC1BP0CG36 223 aa8.93□□□□□ -0.98
LMX1B-204ENST00000561065 CFC1P0CG37 223 aa8.93□□□□□ -0.98
LMX1B-204ENST00000561065 CEND1Q8N111 149 aa8.93□□□□□ -0.98
LMX1B-204ENST00000561065 OCIAD2Q56VL3 154 aa8.92□□□□□ -0.98
LMX1B-204ENST00000561065 HRCT1Q6UXD1 115 aa8.92□□□□□ -0.98
LMX1B-204ENST00000561065 Q6ZQY7 126 aa8.92□□□□□ -0.98
LMX1B-204ENST00000561065 LINC01547P58512 204 aaPredicted RBP8.91□□□□□ -0.98
LMX1B-204ENST00000561065 SMIM29Q86T20 159 aa8.91□□□□□ -0.98
LMX1B-204ENST00000561065 Q6JHZ5 121 aa8.9□□□□□ -0.98
LMX1B-204ENST00000561065 SNHG12Q9BXW3 62 aa8.9□□□□□ -0.98
LMX1B-204ENST00000561065 PRO1854Q9UHT4 67 aa8.9□□□□□ -0.98
LMX1B-204ENST00000561065 TMA7Q9Y2S6 64 aaKnown RBP8.9□□□□□ -0.98
LMX1B-204ENST00000561065 PYY3Q5JQD4 70 aa8.89□□□□□ -0.99
LMX1B-204ENST00000561065 TCL1BO95988 128 aa8.88□□□□□ -0.99
LMX1B-204ENST00000561065 C2orf91Q6ZV80 131 aa8.88□□□□□ -0.99
LMX1B-204ENST00000561065 KRTAP4-1Q9BYQ7 146 aa8.88□□□□□ -0.99
LMX1B-204ENST00000561065 ASB16-AS1Q495Z4 193 aa8.87□□□□□ -0.99
LMX1B-204ENST00000561065 Q5XG85 94 aa8.87□□□□□ -0.99
LMX1B-204ENST00000561065 A0A1B0GX51 115 aa8.85□□□□□ -0.99
LMX1B-204ENST00000561065 HSD52Q0P140 79 aa8.85□□□□□ -0.99
LMX1B-204ENST00000561065 UQCR10Q9UDW1 63 aa8.85□□□□□ -0.99
LMX1B-204ENST00000561065 COX6CP09669 75 aa8.83□□□□□ -1
LMX1B-204ENST00000561065 SEC61BP60468 96 aaKnown RBP8.83□□□□□ -1
LMX1B-204ENST00000561065 IGLV8-61A0A075B6I0 122 aa8.81□□□□□ -1
LMX1B-204ENST00000561065 H3BQ85 93 aa8.81□□□□□ -1
LMX1B-204ENST00000561065 XP32Q5T750 250 aa8.8□□□□□ -1
LMX1B-204ENST00000561065 CLEC2BQ92478 149 aa8.8□□□□□ -1
LMX1B-204ENST00000561065 KRTAP9-2Q9BYQ4 174 aa8.8□□□□□ -1
LMX1B-204ENST00000561065 PSMB2P49721 201 aa8.8□□□□□ -1
LMX1B-204ENST00000561065 FXYD2P54710 66 aa8.8□□□□□ -1
LMX1B-204ENST00000561065 DNAL4O96015 105 aa8.78□□□□□ -1
LMX1B-204ENST00000561065 NDUFV3P56181 108 aaKnown RBP8.75□□□□□ -1.01
LMX1B-204ENST00000561065 C1orf195Q5TG92 126 aa8.75□□□□□ -1.01
LMX1B-204ENST00000561065 IGFL1Q6UW32 110 aa8.75□□□□□ -1.01
LMX1B-204ENST00000561065 A0A0G2JQZ4 141 aa8.74□□□□□ -1.01
LMX1B-204ENST00000561065 TRBV7-7A0A0K0K1E9 115 aa8.74□□□□□ -1.01
LMX1B-204ENST00000561065 FABP2P12104 132 aa8.74□□□□□ -1.01
LMX1B-204ENST00000561065 TRIAP1O43715 76 aa8.73□□□□□ -1.01
LMX1B-204ENST00000561065 FAM218AQ96MZ4 157 aa8.72□□□□□ -1.01
LMX1B-204ENST00000561065 SS18L2Q9UHA2 77 aa8.72□□□□□ -1.01
LMX1B-204ENST00000561065 H3BMG7 143 aa8.71□□□□□ -1.02
LMX1B-204ENST00000561065 SCGB1C2P0DMR2 95 aa8.71□□□□□ -1.02
LMX1B-204ENST00000561065 ORMDL1Q9P0S3 153 aa8.71□□□□□ -1.02
LMX1B-204ENST00000561065 C9orf92A6NGG3 77 aa8.7□□□□□ -1.02
LMX1B-204ENST00000561065 TMEM256-PLSCR3K7ERE1 68 aa8.7□□□□□ -1.02
LMX1B-204ENST00000561065 TEN1Q86WV5 123 aa8.7□□□□□ -1.02
LMX1B-204ENST00000561065 LST1O00453 97 aa8.69□□□□□ -1.02
LMX1B-204ENST00000561065 H3BUT2 72 aa8.68□□□□□ -1.02
LMX1B-204ENST00000561065 Q6Q795 121 aa8.68□□□□□ -1.02
LMX1B-204ENST00000561065 M0R143 59 aa8.67□□□□□ -1.02
LMX1B-204ENST00000561065 K7ERJ3 54 aa8.66□□□□□ -1.02
LMX1B-204ENST00000561065 SMIM6P0DI80 62 aa8.65□□□□□ -1.02
LMX1B-204ENST00000561065 KRTAP19-2Q3LHN2 52 aa8.65□□□□□ -1.02
LMX1B-204ENST00000561065 LCE2CQ5TA81 110 aa8.65□□□□□ -1.02
LMX1B-204ENST00000561065 PCOTHQ58A44 107 aa8.64□□□□□ -1.03
LMX1B-204ENST00000561065 TRACP01848 142 aa8.63□□□□□ -1.03
LMX1B-204ENST00000561065 ANKRD29Q8N6D5 301 aa8.63□□□□□ -1.03
LMX1B-204ENST00000561065 UBE2V1Q13404 147 aa8.61□□□□□ -1.03
LMX1B-204ENST00000561065 TSTD3H0UI37 97 aa8.59□□□□□ -1.03
LMX1B-204ENST00000561065 A0A087WSZ3 146 aa8.57□□□□□ -1.04
LMX1B-204ENST00000561065 TRBV7-4A0A0J9YYF1 115 aa8.56□□□□□ -1.04
LMX1B-204ENST00000561065 C21orf62-AS1Q17RA5 79 aa8.55□□□□□ -1.04
LMX1B-204ENST00000561065 LYRM7Q5U5X0 104 aa8.55□□□□□ -1.04
LMX1B-204ENST00000561065 RBM3P98179 157 aaKnown RBP8.54□□□□□ -1.04
LMX1B-204ENST00000561065 DSCR8Q96T75 97 aa8.54□□□□□ -1.04
LMX1B-204ENST00000561065 RPL37P61927 97 aaKnown RBP8.54□□□□□ -1.04
LMX1B-204ENST00000561065 ATXN8Q156A1 80 aa8.54□□□□□ -1.04
LMX1B-204ENST00000561065 BAALC-AS2P0C853 105 aa8.53□□□□□ -1.04
LMX1B-204ENST00000561065 MT1HP80294 61 aa8.53□□□□□ -1.04
LMX1B-204ENST00000561065 FLGP20930 4061 aaPredicted RBP8.52□□□□□ -1.05
LMX1B-204ENST00000561065 CCKP06307 115 aa8.52□□□□□ -1.05
LMX1B-204ENST00000561065 ATP11AUNQ6ZP68 121 aa8.52□□□□□ -1.05
LMX1B-204ENST00000561065 KRTAP9-6A0A140TA67 174 aa8.51□□□□□ -1.05
LMX1B-204ENST00000561065 A0A1W2PNM2 257 aa8.51□□□□□ -1.05
LMX1B-204ENST00000561065 OBSCN-AS1Q96MR7 158 aa8.51□□□□□ -1.05
LMX1B-204ENST00000561065 A0A1B0GV72 72 aa8.49□□□□□ -1.05
LMX1B-204ENST00000561065 TRBV20-1A0A075B6N2 111 aa8.48□□□□□ -1.05
LMX1B-204ENST00000561065 C9JAW5 83 aa8.48□□□□□ -1.05
LMX1B-204ENST00000561065 JMJD7-PLA2G4BH0Y9G9 81 aa8.48□□□□□ -1.05
LMX1B-204ENST00000561065 Q96NJ1 140 aa8.48□□□□□ -1.05
LMX1B-204ENST00000561065 Q75L30 129 aa8.47□□□□□ -1.05
LMX1B-204ENST00000561065 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.06
LMX1B-204ENST00000561065 SIGMAR1Q99720 223 aa8.46□□□□□ -1.06
LMX1B-204ENST00000561065 VPS25Q9BRG1 176 aa8.46□□□□□ -1.06
LMX1B-204ENST00000561065 IGKV4-1P06312 121 aa8.45□□□□□ -1.06
LMX1B-204ENST00000561065 PDE6GP18545 87 aa8.45□□□□□ -1.06
LMX1B-204ENST00000561065 BATFQ16520 125 aa8.44□□□□□ -1.06
LMX1B-204ENST00000561065 A0A1B0GW54 56 aa8.43□□□□□ -1.06
LMX1B-204ENST00000561065 LINC00313P59037 77 aa8.42□□□□□ -1.06
LMX1B-204ENST00000561065 LOC105371267A0A1B0GV96 52 aa8.41□□□□□ -1.06
LMX1B-204ENST00000561065 NAA38Q9BRA0 125 aaKnown RBP8.4□□□□□ -1.06
LMX1B-204ENST00000561065 J3KT08 172 aa8.39□□□□□ -1.07
LMX1B-204ENST00000561065 LINC00472Q9H8W2 130 aa8.38□□□□□ -1.07
LMX1B-204ENST00000561065 LORP23490 312 aaPredicted RBP8.37□□□□□ -1.07
LMX1B-204ENST00000561065 C20orf166-AS1Q96NR2 134 aa8.37□□□□□ -1.07
LMX1B-204ENST00000561065 FSIP2Q5CZC0 6907 aa8.36□□□□□ -1.07
LMX1B-204ENST00000561065 C9orf118A6NHY6 69 aa8.36□□□□□ -1.07
LMX1B-204ENST00000561065 KRTAP10-6P60371 365 aaPredicted RBP8.36□□□□□ -1.07
LMX1B-204ENST00000561065 A8MUU9 505 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms