RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532		A0A1B0GUL6	1792 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	SAMD9L	Q8IVG5	1584 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	TNRC6C	Q9HCJ0	1690 aa	Known RBP	0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	HIVEP3	Q5T1R4	2406 aa		0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	NDUFA3	O95167	84 aa		0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	SPINK1	P00995	79 aa		0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	DEFB131A	P59861	70 aa		0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	DEFB109B	Q30KR1	87 aa		0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	LINC00308	Q8TCZ7	52 aa		0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	SMIM2	Q9BVW6	85 aa		0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	NOP10	Q9NPE3	64 aa	Known RBP	0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	APLN	Q9ULZ1	77 aa		0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	PKD1L2	Q7Z442	2459 aa		0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	HECTD1	Q9ULT8	2610 aa		0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	NRXN3	Q9Y4C0	1643 aa		0.31	□□□□□ -2.36
SLTM-223	ENST00000560532	ZNF831	Q5JPB2	1677 aa		0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	FAM208A	Q9UK61	1670 aa	Known RBP	0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	MAP1B	P46821	2468 aa	Known RBP	0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	TJP1	Q07157	1748 aa		0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	NRAP	Q86VF7	1730 aa		0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	ANKRD36C	Q5JPF3	1778 aa		0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	ATR	Q13535	2644 aa		0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	ATP7A	Q04656	1500 aa		0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	NBAS	A2RRP1	2371 aa		0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	IAPP	P10997	89 aa		0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	WT1-AS	Q06250	92 aa		0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	H1FX-AS1	Q4G0G2	97 aa		0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	WFDC13	Q8IUB5	93 aa		0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	ITSN2	Q9NZM3	1697 aa		0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	ACACA	Q13085	2346 aa		0.3	□□□□□ -2.36
SLTM-223	ENST00000560532	EP300	Q09472	2414 aa	Predicted RBP	0.29	□□□□□ -2.36
SLTM-223	ENST00000560532	CEP290	O15078	2479 aa		0.29	□□□□□ -2.36
SLTM-223	ENST00000560532	IGF2R	P11717	2491 aa		0.29	□□□□□ -2.36
SLTM-223	ENST00000560532	ZFYVE26	Q68DK2	2539 aa		0.29	□□□□□ -2.36
SLTM-223	ENST00000560532	TOP2A	P11388	1531 aa	Known RBP	0.29	□□□□□ -2.36
SLTM-223	ENST00000560532	EPG5	Q9HCE0	2579 aa		0.29	□□□□□ -2.36
SLTM-223	ENST00000560532		A8MTW9	85 aa		0.29	□□□□□ -2.36
SLTM-223	ENST00000560532		H0YAA0	97 aa		0.29	□□□□□ -2.36
SLTM-223	ENST00000560532		H0YGG7	62 aa		0.29	□□□□□ -2.36
SLTM-223	ENST00000560532	DEFB130B	P0DP73	79 aa		0.29	□□□□□ -2.36
SLTM-223	ENST00000560532	DEFB130A	P0DP74	79 aa		0.29	□□□□□ -2.36
SLTM-223	ENST00000560532	SNRPG	P62308	76 aa	Known RBP	0.29	□□□□□ -2.36
SLTM-223	ENST00000560532	UNC79	Q9P2D8	2635 aa		0.29	□□□□□ -2.36
SLTM-223	ENST00000560532	CHD6	Q8TD26	2715 aa		0.29	□□□□□ -2.36
SLTM-223	ENST00000560532	FAM186A	A6NE01	2351 aa		0.28	□□□□□ -2.36
SLTM-223	ENST00000560532	NFAT5	O94916	1531 aa		0.28	□□□□□ -2.36
SLTM-223	ENST00000560532	CHD9	Q3L8U1	2897 aa		0.28	□□□□□ -2.36
SLTM-223	ENST00000560532	IGLV5-48	A0A075B6I7	105 aa		0.28	□□□□□ -2.36
SLTM-223	ENST00000560532	C9orf92	A6NGG3	77 aa		0.28	□□□□□ -2.36
SLTM-223	ENST00000560532	NDUFA1	O15239	70 aa		0.28	□□□□□ -2.36
SLTM-223	ENST00000560532	PRLH	P81277	87 aa		0.28	□□□□□ -2.36
SLTM-223	ENST00000560532		U3KQA8	63 aa		0.28	□□□□□ -2.36
SLTM-223	ENST00000560532	TRANK1	O15050	2925 aa		0.28	□□□□□ -2.36
SLTM-223	ENST00000560532	CELSR2	Q9HCU4	2923 aa		0.28	□□□□□ -2.36
SLTM-223	ENST00000560532	RIF1	Q5UIP0	2472 aa	Known RBP	0.28	□□□□□ -2.36
SLTM-223	ENST00000560532	IGSF10	Q6WRI0	2623 aa		0.28	□□□□□ -2.37
SLTM-223	ENST00000560532	TENM4	Q6N022	2769 aa		0.28	□□□□□ -2.37
SLTM-223	ENST00000560532	C4A	P0C0L4	1744 aa		0.27	□□□□□ -2.37
SLTM-223	ENST00000560532	C4B	P0C0L5	1744 aa		0.27	□□□□□ -2.37
SLTM-223	ENST00000560532	MTOR	P42345	2549 aa		0.27	□□□□□ -2.37
SLTM-223	ENST00000560532	DSP	P15924	2871 aa	Known RBP	0.27	□□□□□ -2.37
SLTM-223	ENST00000560532	LOC730098	B7Z3J9	87 aa		0.27	□□□□□ -2.37
SLTM-223	ENST00000560532	RPS27	P42677	84 aa	Known RBP	0.27	□□□□□ -2.37
SLTM-223	ENST00000560532	RPS27L	Q71UM5	84 aa	Known RBP	0.27	□□□□□ -2.37
SLTM-223	ENST00000560532	NAV2	Q8IVL1	2488 aa		0.27	□□□□□ -2.37
SLTM-223	ENST00000560532	USP24	Q9UPU5	2620 aa		0.27	□□□□□ -2.37
SLTM-223	ENST00000560532	APC	P25054	2843 aa		0.27	□□□□□ -2.37
SLTM-223	ENST00000560532	CDC42BPA	Q5VT25	1732 aa		0.27	□□□□□ -2.37
SLTM-223	ENST00000560532	DDX60	Q8IY21	1712 aa	Known RBP	0.27	□□□□□ -2.37
SLTM-223	ENST00000560532	SPG11	Q96JI7	2443 aa		0.26	□□□□□ -2.37
SLTM-223	ENST00000560532	NCOR2	Q9Y618	2525 aa		0.26	□□□□□ -2.37
SLTM-223	ENST00000560532	REV3L	O60673	3130 aa		0.26	□□□□□ -2.37
SLTM-223	ENST00000560532		M0QZ58	72 aa		0.26	□□□□□ -2.37
SLTM-223	ENST00000560532		M0R2T5	61 aa		0.26	□□□□□ -2.37
SLTM-223	ENST00000560532	DEFB135	Q30KP9	77 aa		0.26	□□□□□ -2.37
SLTM-223	ENST00000560532	SMR3A	Q99954	134 aa		0.26	□□□□□ -2.37
SLTM-223	ENST00000560532	KIF21B	O75037	1637 aa		0.26	□□□□□ -2.37
SLTM-223	ENST00000560532	LMO7	Q8WWI1	1683 aa		0.26	□□□□□ -2.37
SLTM-223	ENST00000560532	VWF	P04275	2813 aa		0.25	□□□□□ -2.37
SLTM-223	ENST00000560532	FLNA	P21333	2647 aa	Known RBP	0.25	□□□□□ -2.37
SLTM-223	ENST00000560532	SETD2	Q9BYW2	2564 aa	Predicted RBP	0.25	□□□□□ -2.37
SLTM-223	ENST00000560532	LRRK2	Q5S007	2527 aa		0.25	□□□□□ -2.37
SLTM-223	ENST00000560532	ACAN	P16112	2415 aa		0.25	□□□□□ -2.37
SLTM-223	ENST00000560532	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.25	□□□□□ -2.37
SLTM-223	ENST00000560532	MMP24-AS1	A0A0U1RRL7	71 aa		0.25	□□□□□ -2.37
SLTM-223	ENST00000560532		M0QY20	66 aa		0.25	□□□□□ -2.37
SLTM-223	ENST00000560532		S4R3F8	94 aa		0.25	□□□□□ -2.37
SLTM-223	ENST00000560532	SETX	Q7Z333	2677 aa	Known RBP	0.25	□□□□□ -2.37
SLTM-223	ENST00000560532	TOGARAM1	Q9Y4F4	1720 aa		0.24	□□□□□ -2.37
SLTM-223	ENST00000560532	CLTCL1	P53675	1640 aa		0.24	□□□□□ -2.37
SLTM-223	ENST00000560532	KLK9	Q2XQG4	91 aa		0.24	□□□□□ -2.37
SLTM-223	ENST00000560532	WFDC10B	Q8IUB3	73 aa		0.24	□□□□□ -2.37
SLTM-223	ENST00000560532	DEFB106A	Q8N104	65 aa		0.24	□□□□□ -2.37
SLTM-223	ENST00000560532	KAAG1	Q9UBP8	84 aa		0.24	□□□□□ -2.37
SLTM-223	ENST00000560532	OTOG	Q6ZRI0	2925 aa		0.24	□□□□□ -2.37
SLTM-223	ENST00000560532	UBR5	O95071	2799 aa	Predicted RBP	0.24	□□□□□ -2.37
SLTM-223	ENST00000560532	STAB2	Q8WWQ8	2551 aa		0.24	□□□□□ -2.37
SLTM-223	ENST00000560532	PRRC2C	Q9Y520	2896 aa	Known RBP	0.24	□□□□□ -2.37
SLTM-223	ENST00000560532	DUOX1	Q9NRD9	1551 aa		0.23	□□□□□ -2.37

Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms