RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 PRLHP81277 87 aa5.9□□□□□ -1.46
SNRPA1-212ENST00000560496 FAM229BQ4G0N7 80 aa5.9□□□□□ -1.46
SNRPA1-212ENST00000560496 SND1-IT1Q9HBX3 110 aa5.9□□□□□ -1.46
SNRPA1-212ENST00000560496 CFC1BP0CG36 223 aa5.89□□□□□ -1.47
SNRPA1-212ENST00000560496 CFC1P0CG37 223 aa5.89□□□□□ -1.47
SNRPA1-212ENST00000560496 COPS9Q8WXC6 57 aa5.89□□□□□ -1.47
SNRPA1-212ENST00000560496 RETNLBQ9BQ08 111 aa5.89□□□□□ -1.47
SNRPA1-212ENST00000560496 C9JAW5 83 aa5.88□□□□□ -1.47
SNRPA1-212ENST00000560496 M0R378 163 aa5.88□□□□□ -1.47
SNRPA1-212ENST00000560496 LINC00304Q8N9R0 145 aa5.88□□□□□ -1.47
SNRPA1-212ENST00000560496 PLEKHB2Q96CS7 222 aa5.88□□□□□ -1.47
SNRPA1-212ENST00000560496 ZNF625Q96I27 306 aaPredicted RBP5.88□□□□□ -1.47
SNRPA1-212ENST00000560496 CCDC179H3BU77 68 aa5.87□□□□□ -1.47
SNRPA1-212ENST00000560496 LGALS3P17931 250 aaKnown RBP5.87□□□□□ -1.47
SNRPA1-212ENST00000560496 FAM19A1Q7Z5A9 133 aa5.87□□□□□ -1.47
SNRPA1-212ENST00000560496 COX17Q14061 63 aa5.86□□□□□ -1.47
SNRPA1-212ENST00000560496 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
SNRPA1-212ENST00000560496 LINC00643Q86TS7 51 aa5.86□□□□□ -1.47
SNRPA1-212ENST00000560496 C3orf22Q8N5N4 141 aa5.86□□□□□ -1.47
SNRPA1-212ENST00000560496 TTTY13Q9BZ97 58 aa5.86□□□□□ -1.47
SNRPA1-212ENST00000560496 C9orf153Q5TBE3 101 aa5.85□□□□□ -1.47
SNRPA1-212ENST00000560496 A0A0U1RQV1 116 aa5.84□□□□□ -1.47
SNRPA1-212ENST00000560496 ATOX1O00244 68 aa5.84□□□□□ -1.47
SNRPA1-212ENST00000560496 LEPROTO15243 131 aa5.84□□□□□ -1.47
SNRPA1-212ENST00000560496 SFTA2Q6UW10 78 aa5.84□□□□□ -1.47
SNRPA1-212ENST00000560496 A0A0J9YXY3 114 aa5.83□□□□□ -1.48
SNRPA1-212ENST00000560496 J3QQQ9 107 aa5.83□□□□□ -1.48
SNRPA1-212ENST00000560496 TMEM258P61165 79 aa5.83□□□□□ -1.48
SNRPA1-212ENST00000560496 Q1RN00 199 aa5.83□□□□□ -1.48
SNRPA1-212ENST00000560496 PPDPFQ9H3Y8 114 aa5.83□□□□□ -1.48
SNRPA1-212ENST00000560496 TMEM223A0PJW6 202 aa5.82□□□□□ -1.48
SNRPA1-212ENST00000560496 TIMM17BO60830 172 aa5.82□□□□□ -1.48
SNRPA1-212ENST00000560496 COX7CP15954 63 aa5.81□□□□□ -1.48
SNRPA1-212ENST00000560496 DAND5Q8N907 189 aa5.81□□□□□ -1.48
SNRPA1-212ENST00000560496 SPRR4Q96PI1 79 aa5.81□□□□□ -1.48
SNRPA1-212ENST00000560496 HIGD2AQ9BW72 106 aa5.81□□□□□ -1.48
SNRPA1-212ENST00000560496 A0A0U1RRA0 63 aa5.8□□□□□ -1.48
SNRPA1-212ENST00000560496 A4D1N5 150 aa5.8□□□□□ -1.48
SNRPA1-212ENST00000560496 LST1O00453 97 aa5.8□□□□□ -1.48
SNRPA1-212ENST00000560496 SPRR1AP35321 89 aa5.8□□□□□ -1.48
SNRPA1-212ENST00000560496 IGLV7-46A0A075B6I9 117 aa5.79□□□□□ -1.48
SNRPA1-212ENST00000560496 KRTAP4-16G5E9R7 235 aaPredicted RBP5.79□□□□□ -1.48
SNRPA1-212ENST00000560496 PRYO14603 147 aa5.79□□□□□ -1.48
SNRPA1-212ENST00000560496 NCR3O14931 201 aa5.79□□□□□ -1.48
SNRPA1-212ENST00000560496 GHRHP01286 108 aa5.79□□□□□ -1.48
SNRPA1-212ENST00000560496 LINC00158P58513 81 aa5.79□□□□□ -1.48
SNRPA1-212ENST00000560496 GAGE2AQ6NT46 116 aa5.79□□□□□ -1.48
SNRPA1-212ENST00000560496 TRACP01848 142 aa5.78□□□□□ -1.48
SNRPA1-212ENST00000560496 FAM236AA0A1B0GUQ0 79 aa5.77□□□□□ -1.49
SNRPA1-212ENST00000560496 FAM236BA0A1B0GV22 79 aa5.77□□□□□ -1.49
SNRPA1-212ENST00000560496 TSPEAR-AS2P59090 65 aa5.77□□□□□ -1.49
SNRPA1-212ENST00000560496 MIR7-3HGQ8N6C7 128 aa5.77□□□□□ -1.49
SNRPA1-212ENST00000560496 LINC00337Q8N6G1 96 aa5.77□□□□□ -1.49
SNRPA1-212ENST00000560496 SMCR5Q8TEV8 140 aa5.77□□□□□ -1.49
SNRPA1-212ENST00000560496 KCNQ1DNQ9H478 68 aa5.77□□□□□ -1.49
SNRPA1-212ENST00000560496 TEX49A0A1B0GTD5 131 aa5.76□□□□□ -1.49
SNRPA1-212ENST00000560496 S100A7L2Q5SY68 101 aa5.76□□□□□ -1.49
SNRPA1-212ENST00000560496 ZNF706Q9Y5V0 76 aaPredicted RBP5.76□□□□□ -1.49
SNRPA1-212ENST00000560496 TRBV10-3A0A0K0K1G6 114 aa5.75□□□□□ -1.49
SNRPA1-212ENST00000560496 TRIAP1O43715 76 aa5.75□□□□□ -1.49
SNRPA1-212ENST00000560496 HIST1H4AP62805 103 aaKnown RBP5.75□□□□□ -1.49
SNRPA1-212ENST00000560496 LINC00483Q53H64 154 aa5.75□□□□□ -1.49
SNRPA1-212ENST00000560496 SPAG11AQ6PDA7 123 aa5.75□□□□□ -1.49
SNRPA1-212ENST00000560496 FP248Q71RG6 208 aaPredicted RBP5.75□□□□□ -1.49
SNRPA1-212ENST00000560496 Q8NBF4 154 aa5.75□□□□□ -1.49
SNRPA1-212ENST00000560496 KRTAP4-11Q9BYQ6 195 aa5.75□□□□□ -1.49
SNRPA1-212ENST00000560496 KRTAP13-3Q3SY46 172 aa5.74□□□□□ -1.49
SNRPA1-212ENST00000560496 ATP5EP2Q5VTU8 51 aa5.74□□□□□ -1.49
SNRPA1-212ENST00000560496 MUSTN1Q8IVN3 82 aa5.74□□□□□ -1.49
SNRPA1-212ENST00000560496 NDUFA12Q9UI09 145 aa5.74□□□□□ -1.49
SNRPA1-212ENST00000560496 ETDCA0A1B0GVM5 59 aa5.73□□□□□ -1.49
SNRPA1-212ENST00000560496 NDUFC2O95298 119 aa5.73□□□□□ -1.49
SNRPA1-212ENST00000560496 ERC2-IT1O76042 136 aa5.72□□□□□ -1.49
SNRPA1-212ENST00000560496 Q6JHZ5 121 aa5.72□□□□□ -1.49
SNRPA1-212ENST00000560496 SERP2Q8N6R1 65 aa5.72□□□□□ -1.49
SNRPA1-212ENST00000560496 Q9BRP9 147 aa5.71□□□□□ -1.5
SNRPA1-212ENST00000560496 SPINK1P00995 79 aa5.7□□□□□ -1.5
SNRPA1-212ENST00000560496 MOBPQ13875 183 aa5.7□□□□□ -1.5
SNRPA1-212ENST00000560496 KRTAP4-1Q9BYQ7 146 aa5.7□□□□□ -1.5
SNRPA1-212ENST00000560496 H7C2G1 150 aa5.69□□□□□ -1.5
SNRPA1-212ENST00000560496 RPS29P62273 56 aaKnown RBP5.69□□□□□ -1.5
SNRPA1-212ENST00000560496 ASB16-AS1Q495Z4 193 aa5.69□□□□□ -1.5
SNRPA1-212ENST00000560496 Q6ZRX8 168 aa5.69□□□□□ -1.5
SNRPA1-212ENST00000560496 Q8N377 158 aa5.69□□□□□ -1.5
SNRPA1-212ENST00000560496 IGLV9-49A0A0B4J1Y8 123 aa5.68□□□□□ -1.5
SNRPA1-212ENST00000560496 DNAL4O96015 105 aa5.68□□□□□ -1.5
SNRPA1-212ENST00000560496 ATP5EP56381 51 aaPredicted RBP5.68□□□□□ -1.5
SNRPA1-212ENST00000560496 SOSTDC1Q6X4U4 206 aa5.68□□□□□ -1.5
SNRPA1-212ENST00000560496 hADV29S1A0JD25 119 aa5.67□□□□□ -1.5
SNRPA1-212ENST00000560496 EIF4EBP3O60516 100 aaPredicted RBP5.67□□□□□ -1.5
SNRPA1-212ENST00000560496 IGLV6-57P01721 117 aa5.67□□□□□ -1.5
SNRPA1-212ENST00000560496 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
SNRPA1-212ENST00000560496 LITAFQ99732 161 aa5.67□□□□□ -1.5
SNRPA1-212ENST00000560496 PRO0628Q9UI54 55 aa5.67□□□□□ -1.5
SNRPA1-212ENST00000560496 TRAV13-2A0A0B4J235 113 aa5.66□□□□□ -1.5
SNRPA1-212ENST00000560496 H0YGX0 51 aa5.66□□□□□ -1.5
SNRPA1-212ENST00000560496 NPC2P61916 151 aa5.66□□□□□ -1.5
SNRPA1-212ENST00000560496 TRAV23DV6A0A075B6W5 121 aa5.65□□□□□ -1.5
SNRPA1-212ENST00000560496 NDUFC1O43677 76 aa5.64□□□□□ -1.51
SNRPA1-212ENST00000560496 BAALC-AS2P0C853 105 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms