RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 ST20-AS1Q8NBB2 130 aa4.69□□□□□ -1.66
LRRC28-219ENST00000560483 Q8NBF4 154 aa4.69□□□□□ -1.66
LRRC28-219ENST00000560483 A0A1B0GWB2 263 aa4.68□□□□□ -1.66
LRRC28-219ENST00000560483 ELOF1P60002 83 aaKnown RBP4.68□□□□□ -1.66
LRRC28-219ENST00000560483 KRTAP5-11Q6L8G4 156 aa4.68□□□□□ -1.66
LRRC28-219ENST00000560483 NHP2Q9NX24 153 aaKnown RBP4.68□□□□□ -1.66
LRRC28-219ENST00000560483 DLEU1O43261 78 aa4.67□□□□□ -1.66
LRRC28-219ENST00000560483 SMIM11BQ8TCY0 68 aa4.67□□□□□ -1.66
LRRC28-219ENST00000560483 RETNLBQ9BQ08 111 aa4.67□□□□□ -1.66
LRRC28-219ENST00000560483 LAMTOR3Q9UHA4 124 aa4.67□□□□□ -1.66
LRRC28-219ENST00000560483 PYY3Q5JQD4 70 aa4.66□□□□□ -1.66
LRRC28-219ENST00000560483 SPAG11AQ6PDA7 123 aa4.66□□□□□ -1.66
LRRC28-219ENST00000560483 TRBV7-6A0A0J9YX20 115 aa4.65□□□□□ -1.67
LRRC28-219ENST00000560483 SNCGO76070 127 aa4.65□□□□□ -1.67
LRRC28-219ENST00000560483 LINC00483Q53H64 154 aa4.65□□□□□ -1.67
LRRC28-219ENST00000560483 HRCT1Q6UXD1 115 aa4.65□□□□□ -1.67
LRRC28-219ENST00000560483 HIGD1BQ9P298 99 aa4.65□□□□□ -1.67
LRRC28-219ENST00000560483 TEX49A0A1B0GTD5 131 aa4.64□□□□□ -1.67
LRRC28-219ENST00000560483 CEND1Q8N111 149 aa4.64□□□□□ -1.67
LRRC28-219ENST00000560483 LRP2P98164 4655 aa4.63□□□□□ -1.67
LRRC28-219ENST00000560483 hADV29S1A0JD25 119 aa4.63□□□□□ -1.67
LRRC28-219ENST00000560483 F8WEM9 126 aa4.63□□□□□ -1.67
LRRC28-219ENST00000560483 BVES-AS1Q5T3Y7 98 aa4.63□□□□□ -1.67
LRRC28-219ENST00000560483 C2orf91Q6ZV80 131 aa4.63□□□□□ -1.67
LRRC28-219ENST00000560483 SSBP3-AS1Q7Z2R9 100 aa4.63□□□□□ -1.67
LRRC28-219ENST00000560483 SPINK1P00995 79 aa4.62□□□□□ -1.67
LRRC28-219ENST00000560483 CFC1BP0CG36 223 aa4.62□□□□□ -1.67
LRRC28-219ENST00000560483 CFC1P0CG37 223 aa4.62□□□□□ -1.67
LRRC28-219ENST00000560483 LCE1AQ5T7P2 110 aa4.62□□□□□ -1.67
LRRC28-219ENST00000560483 UQCR10Q9UDW1 63 aa4.62□□□□□ -1.67
LRRC28-219ENST00000560483 UBR4Q5T4S7 5183 aa4.62□□□□□ -1.67
LRRC28-219ENST00000560483 PSMB2P49721 201 aa4.61□□□□□ -1.67
LRRC28-219ENST00000560483 HSD52Q0P140 79 aa4.61□□□□□ -1.67
LRRC28-219ENST00000560483 IGLV7-46A0A075B6I9 117 aa4.6□□□□□ -1.67
LRRC28-219ENST00000560483 A0A0B4J2C4 111 aa4.6□□□□□ -1.67
LRRC28-219ENST00000560483 LINC00575Q6W349 94 aa4.6□□□□□ -1.67
LRRC28-219ENST00000560483 Q6ZQY7 126 aa4.6□□□□□ -1.67
LRRC28-219ENST00000560483 PRO1933Q9H354 126 aa4.6□□□□□ -1.67
LRRC28-219ENST00000560483 PRO1854Q9UHT4 67 aa4.6□□□□□ -1.67
LRRC28-219ENST00000560483 LPAP08519 4548 aa4.6□□□□□ -1.67
LRRC28-219ENST00000560483 SPRR1BP22528 89 aa4.59□□□□□ -1.67
LRRC28-219ENST00000560483 FXYD2P54710 66 aa4.59□□□□□ -1.67
LRRC28-219ENST00000560483 KRTAP10-7P60409 375 aaPredicted RBP4.59□□□□□ -1.67
LRRC28-219ENST00000560483 SNHG12Q9BXW3 62 aa4.59□□□□□ -1.67
LRRC28-219ENST00000560483 LIMD2Q9BT23 127 aa4.58□□□□□ -1.68
LRRC28-219ENST00000560483 H0YGX0 51 aa4.57□□□□□ -1.68
LRRC28-219ENST00000560483 K7ERJ3 54 aa4.57□□□□□ -1.68
LRRC28-219ENST00000560483 DNAL4O96015 105 aa4.57□□□□□ -1.68
LRRC28-219ENST00000560483 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.57□□□□□ -1.68
LRRC28-219ENST00000560483 IGLV5-48A0A075B6I7 105 aa4.56□□□□□ -1.68
LRRC28-219ENST00000560483 COX6CP09669 75 aa4.56□□□□□ -1.68
LRRC28-219ENST00000560483 SCGB1C2P0DMR2 95 aa4.56□□□□□ -1.68
LRRC28-219ENST00000560483 Q8N377 158 aa4.56□□□□□ -1.68
LRRC28-219ENST00000560483 A0A0G2JQZ4 141 aa4.55□□□□□ -1.68
LRRC28-219ENST00000560483 FABP2P12104 132 aa4.55□□□□□ -1.68
LRRC28-219ENST00000560483 LINC01547P58512 204 aaPredicted RBP4.55□□□□□ -1.68
LRRC28-219ENST00000560483 FP248Q71RG6 208 aaPredicted RBP4.55□□□□□ -1.68
LRRC28-219ENST00000560483 TRIAP1O43715 76 aa4.54□□□□□ -1.68
LRRC28-219ENST00000560483 SMIM6P0DI80 62 aa4.54□□□□□ -1.68
LRRC28-219ENST00000560483 RPS29P62273 56 aaKnown RBP4.54□□□□□ -1.68
LRRC28-219ENST00000560483 SMIM29Q86T20 159 aa4.54□□□□□ -1.68
LRRC28-219ENST00000560483 A0A1B0GV72 72 aa4.53□□□□□ -1.68
LRRC28-219ENST00000560483 TSTD3H0UI37 97 aa4.53□□□□□ -1.68
LRRC28-219ENST00000560483 M0R143 59 aa4.53□□□□□ -1.68
LRRC28-219ENST00000560483 OCIAD2Q56VL3 154 aa4.53□□□□□ -1.68
LRRC28-219ENST00000560483 CLEC2BQ92478 149 aa4.53□□□□□ -1.68
LRRC28-219ENST00000560483 FAM218AQ96MZ4 157 aa4.53□□□□□ -1.68
LRRC28-219ENST00000560483 H3BUT2 72 aa4.52□□□□□ -1.69
LRRC28-219ENST00000560483 TCL1BO95988 128 aa4.52□□□□□ -1.69
LRRC28-219ENST00000560483 CD164Q04900 197 aa4.52□□□□□ -1.69
LRRC28-219ENST00000560483 BATFQ16520 125 aa4.52□□□□□ -1.69
LRRC28-219ENST00000560483 Q6JHZ5 121 aa4.52□□□□□ -1.69
LRRC28-219ENST00000560483 PPDPFLQ8WWR9 84 aa4.52□□□□□ -1.69
LRRC28-219ENST00000560483 TPRXLQ17RH7 258 aa4.51□□□□□ -1.69
LRRC28-219ENST00000560483 ORMDL1Q9P0S3 153 aa4.51□□□□□ -1.69
LRRC28-219ENST00000560483 A0A1B0GX51 115 aa4.5□□□□□ -1.69
LRRC28-219ENST00000560483 NDUFV3P56181 108 aaKnown RBP4.5□□□□□ -1.69
LRRC28-219ENST00000560483 C9orf92A6NGG3 77 aa4.49□□□□□ -1.69
LRRC28-219ENST00000560483 H3BMG7 143 aa4.49□□□□□ -1.69
LRRC28-219ENST00000560483 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-219ENST00000560483 IGFL1Q6UW32 110 aa4.49□□□□□ -1.69
LRRC28-219ENST00000560483 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
LRRC28-219ENST00000560483 PCP4L1A6NKN8 68 aa4.47□□□□□ -1.69
LRRC28-219ENST00000560483 H3BQ85 93 aa4.47□□□□□ -1.69
LRRC28-219ENST00000560483 NAA38Q9BRA0 125 aaKnown RBP4.47□□□□□ -1.69
LRRC28-219ENST00000560483 TRBV7-7A0A0K0K1E9 115 aa4.46□□□□□ -1.7
LRRC28-219ENST00000560483 LOC105371267A0A1B0GV96 52 aa4.46□□□□□ -1.7
LRRC28-219ENST00000560483 TMEM256-PLSCR3K7ERE1 68 aa4.46□□□□□ -1.7
LRRC28-219ENST00000560483 KRTAP13-3Q3SY46 172 aa4.46□□□□□ -1.7
LRRC28-219ENST00000560483 VPS25Q9BRG1 176 aa4.46□□□□□ -1.7
LRRC28-219ENST00000560483 IGLV8-61A0A075B6I0 122 aa4.45□□□□□ -1.7
LRRC28-219ENST00000560483 A0A0A0MQY5 61 aa4.45□□□□□ -1.7
LRRC28-219ENST00000560483 LST1O00453 97 aa4.45□□□□□ -1.7
LRRC28-219ENST00000560483 SEC61GP60059 68 aa4.45□□□□□ -1.7
LRRC28-219ENST00000560483 ANKRD29Q8N6D5 301 aa4.45□□□□□ -1.7
LRRC28-219ENST00000560483 SS18L2Q9UHA2 77 aa4.45□□□□□ -1.7
LRRC28-219ENST00000560483 A0A0U1RQV1 116 aa4.44□□□□□ -1.7
LRRC28-219ENST00000560483 ATXN8Q156A1 80 aa4.44□□□□□ -1.7
LRRC28-219ENST00000560483 C1orf195Q5TG92 126 aa4.44□□□□□ -1.7
LRRC28-219ENST00000560483 LYRM7Q5U5X0 104 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms