RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 FAM218AQ96MZ4 157 aa7.21□□□□□ -1.26
LDLR-212ENST00000560467 BAALC-AS2P0C853 105 aa7.2□□□□□ -1.26
LDLR-212ENST00000560467 Q6ZQY7 126 aa7.2□□□□□ -1.26
LDLR-212ENST00000560467 KRTAP11-1Q8IUC1 163 aa7.2□□□□□ -1.26
LDLR-212ENST00000560467 SMCR5Q8TEV8 140 aa7.2□□□□□ -1.26
LDLR-212ENST00000560467 DEFB105AQ8NG35 78 aa7.19□□□□□ -1.26
LDLR-212ENST00000560467 PPDPFLQ8WWR9 84 aa7.19□□□□□ -1.26
LDLR-212ENST00000560467 H3BT86 120 aa7.18□□□□□ -1.26
LDLR-212ENST00000560467 LINC01600Q96MT4 127 aa7.18□□□□□ -1.26
LDLR-212ENST00000560467 Q9BRP9 147 aa7.18□□□□□ -1.26
LDLR-212ENST00000560467 TEX49A0A1B0GTD5 131 aa7.17□□□□□ -1.26
LDLR-212ENST00000560467 F8WEM9 126 aa7.16□□□□□ -1.26
LDLR-212ENST00000560467 ANKRD29Q8N6D5 301 aa7.16□□□□□ -1.26
LDLR-212ENST00000560467 LAMTOR3Q9UHA4 124 aa7.16□□□□□ -1.26
LDLR-212ENST00000560467 GAGE2AQ6NT46 116 aa7.14□□□□□ -1.27
LDLR-212ENST00000560467 KRTAP13-1Q8IUC0 172 aa7.14□□□□□ -1.27
LDLR-212ENST00000560467 VPS25Q9BRG1 176 aa7.14□□□□□ -1.27
LDLR-212ENST00000560467 ERC2-IT1O76042 136 aa7.13□□□□□ -1.27
LDLR-212ENST00000560467 SPINK6Q6UWN8 80 aa7.13□□□□□ -1.27
LDLR-212ENST00000560467 JMJD7-PLA2G4BH0Y9G9 81 aa7.12□□□□□ -1.27
LDLR-212ENST00000560467 KRTAP10-8P60410 259 aa7.12□□□□□ -1.27
LDLR-212ENST00000560467 MTURNQ8N3F0 131 aa7.12□□□□□ -1.27
LDLR-212ENST00000560467 IGLV5-48A0A075B6I7 105 aa7.11□□□□□ -1.27
LDLR-212ENST00000560467 ST20-AS1Q8NBB2 130 aa7.11□□□□□ -1.27
LDLR-212ENST00000560467 NDUFV3P56181 108 aaKnown RBP7.1□□□□□ -1.27
LDLR-212ENST00000560467 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
LDLR-212ENST00000560467 RBM3P98179 157 aaKnown RBP7.09□□□□□ -1.27
LDLR-212ENST00000560467 C21orf62-AS1Q17RA5 79 aa7.09□□□□□ -1.27
LDLR-212ENST00000560467 DSCR8Q96T75 97 aa7.09□□□□□ -1.27
LDLR-212ENST00000560467 Q8N377 158 aa7.08□□□□□ -1.28
LDLR-212ENST00000560467 PRO0461Q9UI25 63 aa7.08□□□□□ -1.28
LDLR-212ENST00000560467 LPAP08519 4548 aa7.08□□□□□ -1.28
LDLR-212ENST00000560467 PDE6GP18545 87 aa7.07□□□□□ -1.28
LDLR-212ENST00000560467 SPRR1BP22528 89 aa7.07□□□□□ -1.28
LDLR-212ENST00000560467 TEN1Q86WV5 123 aa7.07□□□□□ -1.28
LDLR-212ENST00000560467 SCGB1A1P11684 91 aa7.06□□□□□ -1.28
LDLR-212ENST00000560467 PCP4P48539 62 aa7.06□□□□□ -1.28
LDLR-212ENST00000560467 ETDBQ3ZM63 59 aa7.06□□□□□ -1.28
LDLR-212ENST00000560467 FAM229BQ4G0N7 80 aa7.05□□□□□ -1.28
LDLR-212ENST00000560467 LINC00483Q53H64 154 aa7.05□□□□□ -1.28
LDLR-212ENST00000560467 CRYGAP11844 174 aa7.04□□□□□ -1.28
LDLR-212ENST00000560467 SMCPP49901 116 aaPredicted RBP7.04□□□□□ -1.28
LDLR-212ENST00000560467 LINC01547P58512 204 aaPredicted RBP7.04□□□□□ -1.28
LDLR-212ENST00000560467 C9orf153Q5TBE3 101 aa7.04□□□□□ -1.28
LDLR-212ENST00000560467 Q6JHZ5 121 aa7.04□□□□□ -1.28
LDLR-212ENST00000560467 IGLV9-49A0A0B4J1Y8 123 aa7.02□□□□□ -1.29
LDLR-212ENST00000560467 A0A1B0GV72 72 aa7.02□□□□□ -1.29
LDLR-212ENST00000560467 C3orf22Q8N5N4 141 aa7.01□□□□□ -1.29
LDLR-212ENST00000560467 SMIM29Q86T20 159 aa7□□□□□ -1.29
LDLR-212ENST00000560467 SIGMAR1Q99720 223 aa7□□□□□ -1.29
LDLR-212ENST00000560467 SSBP3-AS1Q7Z2R9 100 aa6.99□□□□□ -1.29
LDLR-212ENST00000560467 Q8NBF4 154 aa6.99□□□□□ -1.29
LDLR-212ENST00000560467 OBSCN-AS1Q96MR7 158 aa6.99□□□□□ -1.29
LDLR-212ENST00000560467 C14orf132Q9NPU4 83 aa6.99□□□□□ -1.29
LDLR-212ENST00000560467 LOC110117498A0A087WWA1 95 aa6.98□□□□□ -1.29
LDLR-212ENST00000560467 MOBPQ13875 183 aa6.98□□□□□ -1.29
LDLR-212ENST00000560467 C4orf48Q5BLP8 95 aa6.98□□□□□ -1.29
LDLR-212ENST00000560467 ANAPC11Q9NYG5 84 aa6.98□□□□□ -1.29
LDLR-212ENST00000560467 IGLV8-61A0A075B6I0 122 aa6.97□□□□□ -1.29
LDLR-212ENST00000560467 PRR26Q8N8Z3 221 aa6.97□□□□□ -1.29
LDLR-212ENST00000560467 CCKP06307 115 aa6.96□□□□□ -1.3
LDLR-212ENST00000560467 TYMSOSQ8TAI1 123 aa6.96□□□□□ -1.3
LDLR-212ENST00000560467 A0A1B0GW54 56 aa6.95□□□□□ -1.3
LDLR-212ENST00000560467 ACYP1P07311 99 aa6.95□□□□□ -1.3
LDLR-212ENST00000560467 TRBV7-4A0A0J9YYF1 115 aa6.94□□□□□ -1.3
LDLR-212ENST00000560467 MUC2Q02817 5179 aa6.94□□□□□ -1.3
LDLR-212ENST00000560467 IGFL1Q6UW32 110 aa6.93□□□□□ -1.3
LDLR-212ENST00000560467 Q6ZQT0 140 aa6.93□□□□□ -1.3
LDLR-212ENST00000560467 KRTAP1-4P0C5Y4 121 aa6.92□□□□□ -1.3
LDLR-212ENST00000560467 FAM240AA0A1B0GVK7 77 aa6.91□□□□□ -1.3
LDLR-212ENST00000560467 SPAG11AQ6PDA7 123 aa6.91□□□□□ -1.3
LDLR-212ENST00000560467 A0A087X002 238 aa6.9□□□□□ -1.3
LDLR-212ENST00000560467 CD164Q04900 197 aa6.9□□□□□ -1.3
LDLR-212ENST00000560467 KRTAP9-2Q9BYQ4 174 aa6.9□□□□□ -1.3
LDLR-212ENST00000560467 UBL5Q9BZL1 73 aa6.89□□□□□ -1.31
LDLR-212ENST00000560467 SS18L2Q9UHA2 77 aa6.89□□□□□ -1.31
LDLR-212ENST00000560467 PRR4Q16378 134 aa6.88□□□□□ -1.31
LDLR-212ENST00000560467 Q6Q795 121 aa6.88□□□□□ -1.31
LDLR-212ENST00000560467 HRCT1Q6UXD1 115 aa6.88□□□□□ -1.31
LDLR-212ENST00000560467 NREPQ16612 68 aa6.87□□□□□ -1.31
LDLR-212ENST00000560467 KRTAP13-2Q52LG2 175 aa6.87□□□□□ -1.31
LDLR-212ENST00000560467 A0A1W2PNM2 257 aa6.86□□□□□ -1.31
LDLR-212ENST00000560467 SPINK1P00995 79 aa6.86□□□□□ -1.31
LDLR-212ENST00000560467 LINC00304Q8N9R0 145 aa6.86□□□□□ -1.31
LDLR-212ENST00000560467 LIMD2Q9BT23 127 aa6.86□□□□□ -1.31
LDLR-212ENST00000560467 CDIP1Q9H305 208 aa6.86□□□□□ -1.31
LDLR-212ENST00000560467 TRBV7-7A0A0K0K1E9 115 aa6.85□□□□□ -1.31
LDLR-212ENST00000560467 A0A087WSZ3 146 aa6.84□□□□□ -1.31
LDLR-212ENST00000560467 A0A0G2JQZ4 141 aa6.84□□□□□ -1.31
LDLR-212ENST00000560467 FAT4Q6V0I7 4981 aa6.83□□□□□ -1.32
LDLR-212ENST00000560467 A0A0U1RQV1 116 aa6.82□□□□□ -1.32
LDLR-212ENST00000560467 IMUPQ9GZP8 106 aa6.8□□□□□ -1.32
LDLR-212ENST00000560467 LINC00846Q9NV44 126 aa6.8□□□□□ -1.32
LDLR-212ENST00000560467 RPS29P62273 56 aaKnown RBP6.79□□□□□ -1.32
LDLR-212ENST00000560467 J3KT08 172 aa6.78□□□□□ -1.32
LDLR-212ENST00000560467 LCE2AQ5TA79 106 aaPredicted RBP6.78□□□□□ -1.32
LDLR-212ENST00000560467 BPY2O14599 106 aa6.77□□□□□ -1.33
LDLR-212ENST00000560467 Q5XG85 94 aa6.77□□□□□ -1.33
LDLR-212ENST00000560467 Q6ZVQ6 151 aa6.77□□□□□ -1.33
LDLR-212ENST00000560467 LINC00643Q86TS7 51 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms