RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ACYP1P07311 99 aa8.2□□□□□ -1.1
SMAD3-214ENST00000560402 MRPL55Q7Z7F7 128 aaKnown RBP8.2□□□□□ -1.1
SMAD3-214ENST00000560402 PRR26Q8N8Z3 221 aa8.2□□□□□ -1.1
SMAD3-214ENST00000560402 ETDCA0A1B0GVM5 59 aa8.19□□□□□ -1.1
SMAD3-214ENST00000560402 C21orf62-AS1Q17RA5 79 aa8.18□□□□□ -1.1
SMAD3-214ENST00000560402 KRTAP11-1Q8IUC1 163 aa8.18□□□□□ -1.1
SMAD3-214ENST00000560402 DHRS4-AS1Q9P1J3 65 aa8.18□□□□□ -1.1
SMAD3-214ENST00000560402 C22orf24Q9Y442 160 aa8.18□□□□□ -1.1
SMAD3-214ENST00000560402 KRTAP1-4P0C5Y4 121 aa8.17□□□□□ -1.1
SMAD3-214ENST00000560402 KRTAP7-1Q8IUC3 87 aa8.17□□□□□ -1.1
SMAD3-214ENST00000560402 Q6ZQY7 126 aa8.16□□□□□ -1.1
SMAD3-214ENST00000560402 LPAP08519 4548 aa8.15□□□□□ -1.1
SMAD3-214ENST00000560402 SIGMAR1Q99720 223 aa8.14□□□□□ -1.11
SMAD3-214ENST00000560402 LAMTOR3Q9UHA4 124 aa8.14□□□□□ -1.11
SMAD3-214ENST00000560402 RPL37AP8A6NKH3 93 aa8.13□□□□□ -1.11
SMAD3-214ENST00000560402 Q6ZRX8 168 aa8.13□□□□□ -1.11
SMAD3-214ENST00000560402 OBSCN-AS1Q96MR7 158 aa8.13□□□□□ -1.11
SMAD3-214ENST00000560402 ZNF861PO60384 105 aa8.12□□□□□ -1.11
SMAD3-214ENST00000560402 PDE6GP18545 87 aa8.12□□□□□ -1.11
SMAD3-214ENST00000560402 SPRR1AP35321 89 aa8.12□□□□□ -1.11
SMAD3-214ENST00000560402 GAGE2AQ6NT46 116 aa8.11□□□□□ -1.11
SMAD3-214ENST00000560402 RBM3P98179 157 aaKnown RBP8.1□□□□□ -1.11
SMAD3-214ENST00000560402 C14orf132Q9NPU4 83 aa8.1□□□□□ -1.11
SMAD3-214ENST00000560402 B5MCH6 92 aa8.09□□□□□ -1.11
SMAD3-214ENST00000560402 DSCR8Q96T75 97 aa8.09□□□□□ -1.11
SMAD3-214ENST00000560402 CDIP1Q9H305 208 aa8.08□□□□□ -1.12
SMAD3-214ENST00000560402 KRTAP4-16G5E9R7 235 aaPredicted RBP8.06□□□□□ -1.12
SMAD3-214ENST00000560402 CCKP06307 115 aa8.06□□□□□ -1.12
SMAD3-214ENST00000560402 PRR4Q16378 134 aa8.06□□□□□ -1.12
SMAD3-214ENST00000560402 LOC110117498A0A087WWA1 95 aa8.05□□□□□ -1.12
SMAD3-214ENST00000560402 BCE1O60756 84 aa8.05□□□□□ -1.12
SMAD3-214ENST00000560402 SCGB1A1P11684 91 aa8.05□□□□□ -1.12
SMAD3-214ENST00000560402 NDUFV3P56181 108 aaKnown RBP8.05□□□□□ -1.12
SMAD3-214ENST00000560402 FAM19A1Q7Z5A9 133 aa8.05□□□□□ -1.12
SMAD3-214ENST00000560402 A0A1B0GV72 72 aa8.03□□□□□ -1.12
SMAD3-214ENST00000560402 LINC00643Q86TS7 51 aa8.03□□□□□ -1.12
SMAD3-214ENST00000560402 A0A0U1RQV1 116 aa8.01□□□□□ -1.13
SMAD3-214ENST00000560402 F8WEM9 126 aa8.01□□□□□ -1.13
SMAD3-214ENST00000560402 CRYGAP11844 174 aa8.01□□□□□ -1.13
SMAD3-214ENST00000560402 UBE2AP49459 152 aa8.01□□□□□ -1.13
SMAD3-214ENST00000560402 DEFB105AQ8NG35 78 aa8.01□□□□□ -1.13
SMAD3-214ENST00000560402 TYMSOSQ8TAI1 123 aa8□□□□□ -1.13
SMAD3-214ENST00000560402 Q9BRP9 147 aa8□□□□□ -1.13
SMAD3-214ENST00000560402 IGLV5-48A0A075B6I7 105 aa7.99□□□□□ -1.13
SMAD3-214ENST00000560402 A0A087X002 238 aa7.99□□□□□ -1.13
SMAD3-214ENST00000560402 MT-ATP8P03928 68 aa7.99□□□□□ -1.13
SMAD3-214ENST00000560402 Q6ZQT0 140 aa7.99□□□□□ -1.13
SMAD3-214ENST00000560402 UBL5Q9BZL1 73 aa7.99□□□□□ -1.13
SMAD3-214ENST00000560402 ATP5EP2Q5VTU8 51 aa7.98□□□□□ -1.13
SMAD3-214ENST00000560402 HIGD2AQ9BW72 106 aa7.98□□□□□ -1.13
SMAD3-214ENST00000560402 MUC2Q02817 5179 aa7.98□□□□□ -1.13
SMAD3-214ENST00000560402 TRBV7-4A0A0J9YYF1 115 aa7.97□□□□□ -1.13
SMAD3-214ENST00000560402 PRLHP81277 87 aa7.97□□□□□ -1.13
SMAD3-214ENST00000560402 Q6Q795 121 aa7.97□□□□□ -1.13
SMAD3-214ENST00000560402 KRTAP13-1Q8IUC0 172 aa7.97□□□□□ -1.13
SMAD3-214ENST00000560402 FAM229BQ4G0N7 80 aa7.96□□□□□ -1.14
SMAD3-214ENST00000560402 Q8N377 158 aa7.96□□□□□ -1.14
SMAD3-214ENST00000560402 SMCR5Q8TEV8 140 aa7.96□□□□□ -1.14
SMAD3-214ENST00000560402 IMUPQ9GZP8 106 aa7.96□□□□□ -1.14
SMAD3-214ENST00000560402 A0A1B0GW54 56 aa7.95□□□□□ -1.14
SMAD3-214ENST00000560402 PCP4P48539 62 aa7.94□□□□□ -1.14
SMAD3-214ENST00000560402 Q6JHZ5 121 aa7.94□□□□□ -1.14
SMAD3-214ENST00000560402 LINC00846Q9NV44 126 aa7.94□□□□□ -1.14
SMAD3-214ENST00000560402 TRBV7-7A0A0K0K1E9 115 aa7.93□□□□□ -1.14
SMAD3-214ENST00000560402 LINC01547P58512 204 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-214ENST00000560402 ZNF706Q9Y5V0 76 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-214ENST00000560402 ERC2-IT1O76042 136 aa7.92□□□□□ -1.14
SMAD3-214ENST00000560402 KRTAP13-2Q52LG2 175 aa7.92□□□□□ -1.14
SMAD3-214ENST00000560402 LINC00304Q8N9R0 145 aa7.92□□□□□ -1.14
SMAD3-214ENST00000560402 ST20-AS1Q8NBB2 130 aa7.92□□□□□ -1.14
SMAD3-214ENST00000560402 ANAPC11Q9NYG5 84 aa7.89□□□□□ -1.15
SMAD3-214ENST00000560402 SPRR1BP22528 89 aa7.88□□□□□ -1.15
SMAD3-214ENST00000560402 TPRXLQ17RH7 258 aa7.88□□□□□ -1.15
SMAD3-214ENST00000560402 C3orf22Q8N5N4 141 aa7.86□□□□□ -1.15
SMAD3-214ENST00000560402 Q6ZVQ6 151 aa7.85□□□□□ -1.15
SMAD3-214ENST00000560402 Q8NBF4 154 aa7.85□□□□□ -1.15
SMAD3-214ENST00000560402 IGLV8-61A0A075B6I0 122 aa7.84□□□□□ -1.15
SMAD3-214ENST00000560402 IGKV3D-7A0A0C4DH55 119 aa7.84□□□□□ -1.15
SMAD3-214ENST00000560402 RETNLBQ9BQ08 111 aa7.84□□□□□ -1.15
SMAD3-214ENST00000560402 MUC17Q685J3 4493 aa7.83□□□□□ -1.16
SMAD3-214ENST00000560402 CXCL6P80162 114 aa7.83□□□□□ -1.16
SMAD3-214ENST00000560402 NREPQ16612 68 aa7.83□□□□□ -1.16
SMAD3-214ENST00000560402 SMIM29Q86T20 159 aa7.83□□□□□ -1.16
SMAD3-214ENST00000560402 FAT4Q6V0I7 4981 aa7.83□□□□□ -1.16
SMAD3-214ENST00000560402 IGLV7-46A0A075B6I9 117 aa7.81□□□□□ -1.16
SMAD3-214ENST00000560402 HIST1H4AP62805 103 aaKnown RBP7.81□□□□□ -1.16
SMAD3-214ENST00000560402 SPAG11AQ6PDA7 123 aa7.81□□□□□ -1.16
SMAD3-214ENST00000560402 ANAPC13Q9BS18 74 aa7.81□□□□□ -1.16
SMAD3-214ENST00000560402 SPRR4Q96PI1 79 aa7.8□□□□□ -1.16
SMAD3-214ENST00000560402 FAM236AA0A1B0GUQ0 79 aa7.79□□□□□ -1.16
SMAD3-214ENST00000560402 FAM236BA0A1B0GV22 79 aa7.79□□□□□ -1.16
SMAD3-214ENST00000560402 LCE2AQ5TA79 106 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-214ENST00000560402 A0A1W2PNM2 257 aa7.78□□□□□ -1.16
SMAD3-214ENST00000560402 IGFL1Q6UW32 110 aa7.78□□□□□ -1.16
SMAD3-214ENST00000560402 FP248Q71RG6 208 aaPredicted RBP7.78□□□□□ -1.16
SMAD3-214ENST00000560402 ATOX1O00244 68 aa7.77□□□□□ -1.17
SMAD3-214ENST00000560402 BPY2O14599 106 aa7.77□□□□□ -1.17
SMAD3-214ENST00000560402 LINC00483Q53H64 154 aa7.77□□□□□ -1.17
SMAD3-214ENST00000560402 C9orf153Q5TBE3 101 aa7.76□□□□□ -1.17
SMAD3-214ENST00000560402 KRTAP9-2Q9BYQ4 174 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms