RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 NHSQ6T4R5 1651 aa0.15□□□□□ -2.39
CTDSPL2-207ENST00000559738 HSPG2P98160 4391 aa0.15□□□□□ -2.39
CTDSPL2-207ENST00000559738 FLNBO75369 2602 aaKnown RBP0.15□□□□□ -2.39
CTDSPL2-207ENST00000559738 FLNAP21333 2647 aaKnown RBP0.15□□□□□ -2.39
CTDSPL2-207ENST00000559738 ASXL1Q8IXJ9 1541 aa0.15□□□□□ -2.39
CTDSPL2-207ENST00000559738 UBL5Q9BZL1 73 aa0.15□□□□□ -2.39
CTDSPL2-207ENST00000559738 GNG13Q9P2W3 67 aa0.15□□□□□ -2.39
CTDSPL2-207ENST00000559738 ACANP16112 2415 aa0.14□□□□□ -2.39
CTDSPL2-207ENST00000559738 H0YAA0 97 aa0.14□□□□□ -2.39
CTDSPL2-207ENST00000559738 MRPL33O75394 65 aaKnown RBP0.14□□□□□ -2.39
CTDSPL2-207ENST00000559738 ATXN8Q156A1 80 aa0.14□□□□□ -2.39
CTDSPL2-207ENST00000559738 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
CTDSPL2-207ENST00000559738 AKAP13Q12802 2813 aa0.14□□□□□ -2.39
CTDSPL2-207ENST00000559738 GPR98Q8WXG9 6306 aa0.14□□□□□ -2.39
CTDSPL2-207ENST00000559738 MROH1Q8NDA8 1641 aa0.13□□□□□ -2.39
CTDSPL2-207ENST00000559738 H0YGG7 62 aa0.13□□□□□ -2.39
CTDSPL2-207ENST00000559738 MADDQ8WXG6 1647 aa0.13□□□□□ -2.39
CTDSPL2-207ENST00000559738 DEFB131BA0A096LNP1 70 aa0.12□□□□□ -2.39
CTDSPL2-207ENST00000559738 KCNQ1DNQ9H478 68 aa0.12□□□□□ -2.39
CTDSPL2-207ENST00000559738 NBASA2RRP1 2371 aa0.11□□□□□ -2.39
CTDSPL2-207ENST00000559738 PCNX1Q96RV3 2341 aa0.1□□□□□ -2.39
CTDSPL2-207ENST00000559738 SPRR2BP35325 72 aa0.1□□□□□ -2.39
CTDSPL2-207ENST00000559738 C3P01024 1663 aa0.1□□□□□ -2.39
CTDSPL2-207ENST00000559738 CCDC180Q9P1Z9 1646 aa0.09□□□□□ -2.39
CTDSPL2-207ENST00000559738 IAPPP10997 89 aa0.09□□□□□ -2.4
CTDSPL2-207ENST00000559738 HECTD1Q9ULT8 2610 aa0.09□□□□□ -2.4
CTDSPL2-207ENST00000559738 DSPP15924 2871 aaKnown RBP0.08□□□□□ -2.4
CTDSPL2-207ENST00000559738 CREBBPQ92793 2442 aa0.08□□□□□ -2.4
CTDSPL2-207ENST00000559738 EFCAB5A4FU69 1503 aa0.08□□□□□ -2.4
CTDSPL2-207ENST00000559738 KIAA0586Q9BVV6 1533 aa0.08□□□□□ -2.4
CTDSPL2-207ENST00000559738 TENM2Q9NT68 2774 aa0.08□□□□□ -2.4
CTDSPL2-207ENST00000559738 ZANQ9Y493 2812 aa0.08□□□□□ -2.4
CTDSPL2-207ENST00000559738 BPTFQ12830 3046 aa0.08□□□□□ -2.4
CTDSPL2-207ENST00000559738 ANKRD36CQ5JPF3 1778 aa0.08□□□□□ -2.4
CTDSPL2-207ENST00000559738 INO80Q9ULG1 1556 aaPredicted RBP0.07□□□□□ -2.4
CTDSPL2-207ENST00000559738 PRRC2CQ9Y520 2896 aaKnown RBP0.07□□□□□ -2.4
CTDSPL2-207ENST00000559738 ETDCA0A1B0GVM5 59 aa0.07□□□□□ -2.4
CTDSPL2-207ENST00000559738 LYNX1G3V0Z9 82 aa0.07□□□□□ -2.4
CTDSPL2-207ENST00000559738 CRIP1P50238 77 aa0.07□□□□□ -2.4
CTDSPL2-207ENST00000559738 TNRC18O15417 2968 aaPredicted RBP0.07□□□□□ -2.4
CTDSPL2-207ENST00000559738 COL6A3P12111 3177 aa0.07□□□□□ -2.4
CTDSPL2-207ENST00000559738 MAP1AP78559 2803 aaPredicted RBP0.07□□□□□ -2.4
CTDSPL2-207ENST00000559738 LYSTQ99698 3801 aa0.06□□□□□ -2.4
CTDSPL2-207ENST00000559738 DEFB130BP0DP73 79 aa0.06□□□□□ -2.4
CTDSPL2-207ENST00000559738 DEFB130AP0DP74 79 aa0.06□□□□□ -2.4
CTDSPL2-207ENST00000559738 LRP2P98164 4655 aa0.06□□□□□ -2.4
CTDSPL2-207ENST00000559738 SYNE2Q8WXH0 6885 aaKnown RBP0.06□□□□□ -2.4
CTDSPL2-207ENST00000559738 SPTBN4Q9H254 2564 aa0.03□□□□□ -2.4
CTDSPL2-207ENST00000559738 PKHD1P08F94 4074 aa0.03□□□□□ -2.4
CTDSPL2-207ENST00000559738 ITSN2Q9NZM3 1697 aa0.03□□□□□ -2.4
CTDSPL2-207ENST00000559738 FSIP2Q5CZC0 6907 aa0.03□□□□□ -2.41
CTDSPL2-207ENST00000559738 ABCC6O95255 1503 aa0.03□□□□□ -2.41
CTDSPL2-207ENST00000559738 LRP1BQ9NZR2 4599 aa0.03□□□□□ -2.41
CTDSPL2-207ENST00000559738 ABCA6Q8N139 1617 aa0.02□□□□□ -2.41
CTDSPL2-207ENST00000559738 LINC01549A6NIU2 74 aa0.02□□□□□ -2.41
CTDSPL2-207ENST00000559738 PKD1P98161 4303 aa0.01□□□□□ -2.41
CTDSPL2-207ENST00000559738 DEFB114Q30KQ6 69 aa0.01□□□□□ -2.41
CTDSPL2-207ENST00000559738 SETD2Q9BYW2 2564 aaPredicted RBP0□□□□□ -2.41
CTDSPL2-207ENST00000559738 CEP290O15078 2479 aa0□□□□□ -2.41
CTDSPL2-207ENST00000559738 KIF1AQ12756 1690 aa0□□□□□ -2.41
CTDSPL2-207ENST00000559738 MINOS1Q5TGZ0 78 aa0□□□□□ -2.41
CTDSPL2-207ENST00000559738 DEFB106AQ8N104 65 aa0□□□□□ -2.41
CTDSPL2-207ENST00000559738 NF1P21359 2839 aa-0□□□□□ -2.41
CTDSPL2-207ENST00000559738 STAB1Q9NY15 2570 aa-0□□□□□ -2.41
CTDSPL2-207ENST00000559738 FLGP20930 4061 aaPredicted RBP-0.02□□□□□ -2.41
CTDSPL2-207ENST00000559738 ZZEF1O43149 2961 aa-0.02□□□□□ -2.41
CTDSPL2-207ENST00000559738 NBEAL1Q6ZS30 2694 aa-0.02□□□□□ -2.41
CTDSPL2-207ENST00000559738 A0A087WWC5 75 aa-0.02□□□□□ -2.41
CTDSPL2-207ENST00000559738 PRLHP81277 87 aa-0.02□□□□□ -2.41
CTDSPL2-207ENST00000559738 LY75O60449 1722 aa-0.02□□□□□ -2.41
CTDSPL2-207ENST00000559738 VPS13BQ7Z7G8 4022 aa-0.03□□□□□ -2.41
CTDSPL2-207ENST00000559738 SSPOA2VEC9 5147 aa-0.03□□□□□ -2.41
CTDSPL2-207ENST00000559738 STAB2Q8WWQ8 2551 aa-0.03□□□□□ -2.41
CTDSPL2-207ENST00000559738 SVEP1Q4LDE5 3571 aa-0.04□□□□□ -2.42
CTDSPL2-207ENST00000559738 SMIM31A0A1B0GVY4 71 aa-0.04□□□□□ -2.42
CTDSPL2-207ENST00000559738 H3BNG1 76 aa-0.04□□□□□ -2.42
CTDSPL2-207ENST00000559738 KRTAP6-2Q3LI66 62 aa-0.04□□□□□ -2.42
CTDSPL2-207ENST00000559738 GLI2P10070 1586 aa-0.04□□□□□ -2.42
CTDSPL2-207ENST00000559738 CDC42BPAQ5VT25 1732 aa-0.04□□□□□ -2.42
CTDSPL2-207ENST00000559738 CROCC2H7BZ55 1655 aa-0.05□□□□□ -2.42
CTDSPL2-207ENST00000559738 TIAM1Q13009 1591 aa-0.05□□□□□ -2.42
CTDSPL2-207ENST00000559738 SPRR2AP35326 72 aa-0.05□□□□□ -2.42
CTDSPL2-207ENST00000559738 NCBP2-AS2Q69YL0 99 aa-0.05□□□□□ -2.42
CTDSPL2-207ENST00000559738 S100ZQ8WXG8 99 aa-0.05□□□□□ -2.42
CTDSPL2-207ENST00000559738 S4R3F8 94 aa-0.05□□□□□ -2.42
CTDSPL2-207ENST00000559738 GCN1Q92616 2671 aaKnown RBP-0.05□□□□□ -2.42
CTDSPL2-207ENST00000559738 SPG11Q96JI7 2443 aa-0.05□□□□□ -2.42
CTDSPL2-207ENST00000559738 FCER1GP30273 86 aa-0.06□□□□□ -2.42
CTDSPL2-207ENST00000559738 C6orf48Q9UBA6 75 aa-0.06□□□□□ -2.42
CTDSPL2-207ENST00000559738 TGP01266 2768 aa-0.06□□□□□ -2.42
CTDSPL2-207ENST00000559738 TOGARAM1Q9Y4F4 1720 aa-0.07□□□□□ -2.42
CTDSPL2-207ENST00000559738 PKD1L2Q7Z442 2459 aa-0.07□□□□□ -2.42
CTDSPL2-207ENST00000559738 M0R1W7 72 aa-0.07□□□□□ -2.42
CTDSPL2-207ENST00000559738 RPS27P42677 84 aaKnown RBP-0.07□□□□□ -2.42
CTDSPL2-207ENST00000559738 WT1-ASQ06250 92 aa-0.07□□□□□ -2.42
CTDSPL2-207ENST00000559738 RPS27LQ71UM5 84 aaKnown RBP-0.07□□□□□ -2.42
CTDSPL2-207ENST00000559738 ERICH3Q5RHP9 1530 aa-0.08□□□□□ -2.42
CTDSPL2-207ENST00000559738 DMXL1Q9Y485 3027 aa-0.08□□□□□ -2.42
CTDSPL2-207ENST00000559738 SONP18583 2426 aaKnown RBP-0.08□□□□□ -2.42
CTDSPL2-207ENST00000559738 PDZD2O15018 2839 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms