RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 VAMP3Q15836 100 aa7.98□□□□□ -1.13
LRRC28-213ENST00000559399 FSIP2Q5CZC0 6907 aa7.97□□□□□ -1.13
LRRC28-213ENST00000559399 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
LRRC28-213ENST00000559399 LINC00575Q6W349 94 aa7.96□□□□□ -1.14
LRRC28-213ENST00000559399 hADV29S1A0JD25 119 aa7.94□□□□□ -1.14
LRRC28-213ENST00000559399 Q6ZQY7 126 aa7.94□□□□□ -1.14
LRRC28-213ENST00000559399 HSBP1L1C9JCN9 74 aa7.93□□□□□ -1.14
LRRC28-213ENST00000559399 Q6JHZ5 121 aa7.93□□□□□ -1.14
LRRC28-213ENST00000559399 CLEC2BQ92478 149 aa7.93□□□□□ -1.14
LRRC28-213ENST00000559399 LORP23490 312 aaPredicted RBP7.92□□□□□ -1.14
LRRC28-213ENST00000559399 COX6B2Q6YFQ2 88 aa7.92□□□□□ -1.14
LRRC28-213ENST00000559399 TRBV7-7A0A0K0K1E9 115 aa7.91□□□□□ -1.14
LRRC28-213ENST00000559399 KRTAP10-6P60371 365 aaPredicted RBP7.91□□□□□ -1.14
LRRC28-213ENST00000559399 M0R2T5 61 aa7.9□□□□□ -1.14
LRRC28-213ENST00000559399 S100A2P29034 98 aa7.9□□□□□ -1.14
LRRC28-213ENST00000559399 IGFL1Q6UW32 110 aa7.9□□□□□ -1.14
LRRC28-213ENST00000559399 HIST3H2BBQ8N257 126 aa7.9□□□□□ -1.14
LRRC28-213ENST00000559399 HIST1H2BLQ99880 126 aa7.9□□□□□ -1.14
LRRC28-213ENST00000559399 OCIAD2Q56VL3 154 aa7.89□□□□□ -1.15
LRRC28-213ENST00000559399 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.88□□□□□ -1.15
LRRC28-213ENST00000559399 BVES-AS1Q5T3Y7 98 aa7.86□□□□□ -1.15
LRRC28-213ENST00000559399 PPDPFLQ8WWR9 84 aa7.86□□□□□ -1.15
LRRC28-213ENST00000559399 C12orf57Q99622 126 aa7.86□□□□□ -1.15
LRRC28-213ENST00000559399 OBSCN-AS1Q96MR7 158 aa7.85□□□□□ -1.15
LRRC28-213ENST00000559399 SNHG12Q9BXW3 62 aa7.84□□□□□ -1.15
LRRC28-213ENST00000559399 ATP11AUNQ6ZP68 121 aa7.83□□□□□ -1.16
LRRC28-213ENST00000559399 Q75L30 129 aa7.83□□□□□ -1.16
LRRC28-213ENST00000559399 HIST1H4GQ99525 98 aa7.83□□□□□ -1.16
LRRC28-213ENST00000559399 H3BUT2 72 aa7.82□□□□□ -1.16
LRRC28-213ENST00000559399 SCGB1D1O95968 90 aa7.82□□□□□ -1.16
LRRC28-213ENST00000559399 LST1O00453 97 aa7.81□□□□□ -1.16
LRRC28-213ENST00000559399 S100A6P06703 90 aa7.8□□□□□ -1.16
LRRC28-213ENST00000559399 GHRHP01286 108 aa7.78□□□□□ -1.16
LRRC28-213ENST00000559399 COX8AP10176 69 aa7.78□□□□□ -1.16
LRRC28-213ENST00000559399 SS18L2Q9UHA2 77 aa7.78□□□□□ -1.16
LRRC28-213ENST00000559399 Q6Q795 121 aa7.77□□□□□ -1.17
LRRC28-213ENST00000559399 FLGP20930 4061 aaPredicted RBP7.76□□□□□ -1.17
LRRC28-213ENST00000559399 SNCGO76070 127 aa7.76□□□□□ -1.17
LRRC28-213ENST00000559399 Q96NJ1 140 aa7.76□□□□□ -1.17
LRRC28-213ENST00000559399 TMEM238LA0A1B0GVL6 79 aa7.75□□□□□ -1.17
LRRC28-213ENST00000559399 DLEU1O43261 78 aa7.75□□□□□ -1.17
LRRC28-213ENST00000559399 RAB37Q96AX2 223 aa7.75□□□□□ -1.17
LRRC28-213ENST00000559399 CFC1P0CG37 223 aa7.74□□□□□ -1.17
LRRC28-213ENST00000559399 H0YGX0 51 aa7.73□□□□□ -1.17
LRRC28-213ENST00000559399 TEN1Q86WV5 123 aa7.73□□□□□ -1.17
LRRC28-213ENST00000559399 A0A0B4J2C4 111 aa7.72□□□□□ -1.17
LRRC28-213ENST00000559399 NDUFV3P56181 108 aaKnown RBP7.72□□□□□ -1.17
LRRC28-213ENST00000559399 FAM218AQ96MZ4 157 aa7.72□□□□□ -1.17
LRRC28-213ENST00000559399 C20orf166-AS1Q96NR2 134 aa7.72□□□□□ -1.17
LRRC28-213ENST00000559399 A0A087WSZ3 146 aa7.7□□□□□ -1.18
LRRC28-213ENST00000559399 C14orf144Q96I85 54 aa7.7□□□□□ -1.18
LRRC28-213ENST00000559399 A8MUU9 505 aa7.69□□□□□ -1.18
LRRC28-213ENST00000559399 S100A1P23297 94 aa7.69□□□□□ -1.18
LRRC28-213ENST00000559399 HIGD1BQ9P298 99 aa7.69□□□□□ -1.18
LRRC28-213ENST00000559399 LOC100996750A0A140TA64 210 aa7.68□□□□□ -1.18
LRRC28-213ENST00000559399 KRTAP4-6Q9BYQ5 205 aa7.68□□□□□ -1.18
LRRC28-213ENST00000559399 H3BMG7 143 aa7.67□□□□□ -1.18
LRRC28-213ENST00000559399 PAM16Q9Y3D7 125 aa7.67□□□□□ -1.18
LRRC28-213ENST00000559399 A0A1B0GX51 115 aa7.66□□□□□ -1.18
LRRC28-213ENST00000559399 FABP2P12104 132 aa7.66□□□□□ -1.18
LRRC28-213ENST00000559399 SPATA45Q537H7 98 aa7.66□□□□□ -1.18
LRRC28-213ENST00000559399 TRBV20-1A0A075B6N2 111 aa7.65□□□□□ -1.18
LRRC28-213ENST00000559399 C2orf91Q6ZV80 131 aa7.65□□□□□ -1.18
LRRC28-213ENST00000559399 DSCR10P59022 87 aa7.64□□□□□ -1.19
LRRC28-213ENST00000559399 CEND1Q8N111 149 aa7.63□□□□□ -1.19
LRRC28-213ENST00000559399 SIGMAR1Q99720 223 aa7.63□□□□□ -1.19
LRRC28-213ENST00000559399 VAMP8Q9BV40 100 aa7.63□□□□□ -1.19
LRRC28-213ENST00000559399 PRO1854Q9UHT4 67 aa7.63□□□□□ -1.19
LRRC28-213ENST00000559399 A0A1W2PNM2 257 aa7.61□□□□□ -1.19
LRRC28-213ENST00000559399 TRIAP1O43715 76 aa7.59□□□□□ -1.19
LRRC28-213ENST00000559399 FXYD2P54710 66 aa7.58□□□□□ -1.2
LRRC28-213ENST00000559399 KRTAP9-8Q9BYQ0 159 aa7.58□□□□□ -1.2
LRRC28-213ENST00000559399 TRBV7-4A0A0J9YYF1 115 aa7.57□□□□□ -1.2
LRRC28-213ENST00000559399 DNAL4O96015 105 aa7.57□□□□□ -1.2
LRRC28-213ENST00000559399 IGKV4-1P06312 121 aa7.57□□□□□ -1.2
LRRC28-213ENST00000559399 LINC00313P59037 77 aa7.57□□□□□ -1.2
LRRC28-213ENST00000559399 ANKRD29Q8N6D5 301 aa7.57□□□□□ -1.2
LRRC28-213ENST00000559399 ORMDL1Q9P0S3 153 aa7.56□□□□□ -1.2
LRRC28-213ENST00000559399 A0A1B0GV72 72 aa7.55□□□□□ -1.2
LRRC28-213ENST00000559399 KRTAP16-1A8MUX0 517 aa7.55□□□□□ -1.2
LRRC28-213ENST00000559399 H3BQ85 93 aa7.55□□□□□ -1.2
LRRC28-213ENST00000559399 FAM236DA0A1B0GTK5 79 aa7.53□□□□□ -1.2
LRRC28-213ENST00000559399 FAM236CP0DP71 79 aa7.53□□□□□ -1.2
LRRC28-213ENST00000559399 PSMB2P49721 201 aa7.52□□□□□ -1.21
LRRC28-213ENST00000559399 TMEM256-PLSCR3K7ERE1 68 aa7.51□□□□□ -1.21
LRRC28-213ENST00000559399 TRACP01848 142 aa7.51□□□□□ -1.21
LRRC28-213ENST00000559399 K7ERJ3 54 aa7.5□□□□□ -1.21
LRRC28-213ENST00000559399 CCKP06307 115 aa7.5□□□□□ -1.21
LRRC28-213ENST00000559399 HSD52Q0P140 79 aa7.5□□□□□ -1.21
LRRC28-213ENST00000559399 DEFB116Q30KQ4 102 aa7.5□□□□□ -1.21
LRRC28-213ENST00000559399 NOTCH2NLQ7Z3S9 236 aa7.5□□□□□ -1.21
LRRC28-213ENST00000559399 LINC00472Q9H8W2 130 aa7.5□□□□□ -1.21
LRRC28-213ENST00000559399 COX6CP09669 75 aa7.49□□□□□ -1.21
LRRC28-213ENST00000559399 RBM12B-AS1Q9P1G2 102 aa7.49□□□□□ -1.21
LRRC28-213ENST00000559399 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
LRRC28-213ENST00000559399 HRES1P13985 223 aa7.47□□□□□ -1.21
LRRC28-213ENST00000559399 MPLKIPQ8TAP9 179 aa7.47□□□□□ -1.21
LRRC28-213ENST00000559399 MT2AP02795 61 aa7.46□□□□□ -1.22
LRRC28-213ENST00000559399 UBE2V1Q13404 147 aa7.46□□□□□ -1.22
LRRC28-213ENST00000559399 USH2AO75445 5202 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms