RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 UBE2V1Q13404 147 aa7.3□□□□□ -1.24
GABPB1-208ENST00000558970 Q8N377 158 aa7.3□□□□□ -1.24
GABPB1-208ENST00000558970 IGLV5-48A0A075B6I7 105 aa7.29□□□□□ -1.24
GABPB1-208ENST00000558970 TAX1BP3O14907 124 aa7.29□□□□□ -1.24
GABPB1-208ENST00000558970 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.29□□□□□ -1.24
GABPB1-208ENST00000558970 GTF2H5Q6ZYL4 71 aa7.29□□□□□ -1.24
GABPB1-208ENST00000558970 LAMTOR3Q9UHA4 124 aa7.29□□□□□ -1.24
GABPB1-208ENST00000558970 C9orf118A6NHY6 69 aa7.28□□□□□ -1.24
GABPB1-208ENST00000558970 DNAL4O96015 105 aa7.28□□□□□ -1.24
GABPB1-208ENST00000558970 SPRR1BP22528 89 aa7.28□□□□□ -1.24
GABPB1-208ENST00000558970 Q8NBF4 154 aa7.27□□□□□ -1.25
GABPB1-208ENST00000558970 TCL1BO95988 128 aa7.26□□□□□ -1.25
GABPB1-208ENST00000558970 SMIM29Q86T20 159 aa7.26□□□□□ -1.25
GABPB1-208ENST00000558970 A0A0G2JQZ4 141 aa7.25□□□□□ -1.25
GABPB1-208ENST00000558970 A0A1B0GV72 72 aa7.25□□□□□ -1.25
GABPB1-208ENST00000558970 A0A1B0GX51 115 aa7.25□□□□□ -1.25
GABPB1-208ENST00000558970 LST1O00453 97 aa7.25□□□□□ -1.25
GABPB1-208ENST00000558970 FABP2P12104 132 aa7.25□□□□□ -1.25
GABPB1-208ENST00000558970 LINC00304Q8N9R0 145 aa7.25□□□□□ -1.25
GABPB1-208ENST00000558970 F8WEM9 126 aa7.24□□□□□ -1.25
GABPB1-208ENST00000558970 HRCT1Q6UXD1 115 aa7.24□□□□□ -1.25
GABPB1-208ENST00000558970 LYRM7Q5U5X0 104 aa7.23□□□□□ -1.25
GABPB1-208ENST00000558970 ORMDL1Q9P0S3 153 aa7.23□□□□□ -1.25
GABPB1-208ENST00000558970 TRACP01848 142 aa7.22□□□□□ -1.25
GABPB1-208ENST00000558970 ATXN8Q156A1 80 aa7.22□□□□□ -1.25
GABPB1-208ENST00000558970 OCIAD2Q56VL3 154 aa7.22□□□□□ -1.25
GABPB1-208ENST00000558970 A0A1W2PPM0 123 aa7.21□□□□□ -1.26
GABPB1-208ENST00000558970 C4orf48Q5BLP8 95 aa7.21□□□□□ -1.26
GABPB1-208ENST00000558970 SSBP3-AS1Q7Z2R9 100 aa7.2□□□□□ -1.26
GABPB1-208ENST00000558970 PPDPFLQ8WWR9 84 aa7.2□□□□□ -1.26
GABPB1-208ENST00000558970 NDUFV3P56181 108 aaKnown RBP7.19□□□□□ -1.26
GABPB1-208ENST00000558970 K7EP34 96 aa7.18□□□□□ -1.26
GABPB1-208ENST00000558970 MTURNQ8N3F0 131 aa7.18□□□□□ -1.26
GABPB1-208ENST00000558970 RETNLBQ9BQ08 111 aa7.18□□□□□ -1.26
GABPB1-208ENST00000558970 GHRHP01286 108 aa7.17□□□□□ -1.26
GABPB1-208ENST00000558970 SPCS1Q9Y6A9 102 aa7.17□□□□□ -1.26
GABPB1-208ENST00000558970 TRBV20-1A0A075B6N2 111 aa7.16□□□□□ -1.26
GABPB1-208ENST00000558970 C9JAW5 83 aa7.16□□□□□ -1.26
GABPB1-208ENST00000558970 H3BMG7 143 aa7.16□□□□□ -1.26
GABPB1-208ENST00000558970 TMEM256-PLSCR3K7ERE1 68 aa7.16□□□□□ -1.26
GABPB1-208ENST00000558970 BAALC-AS2P0C853 105 aa7.16□□□□□ -1.26
GABPB1-208ENST00000558970 IGFL1Q6UW32 110 aa7.16□□□□□ -1.26
GABPB1-208ENST00000558970 LRP2P98164 4655 aa7.15□□□□□ -1.26
GABPB1-208ENST00000558970 SPAG11AQ6PDA7 123 aa7.15□□□□□ -1.26
GABPB1-208ENST00000558970 F8W1H4 67 aa7.13□□□□□ -1.27
GABPB1-208ENST00000558970 ANKRD29Q8N6D5 301 aa7.13□□□□□ -1.27
GABPB1-208ENST00000558970 RNF213Q63HN8 5207 aa7.13□□□□□ -1.27
GABPB1-208ENST00000558970 IGLV8-61A0A075B6I0 122 aa7.12□□□□□ -1.27
GABPB1-208ENST00000558970 H3BQ85 93 aa7.12□□□□□ -1.27
GABPB1-208ENST00000558970 K7ERU9 68 aa7.12□□□□□ -1.27
GABPB1-208ENST00000558970 SPINK1P00995 79 aa7.12□□□□□ -1.27
GABPB1-208ENST00000558970 Q6JHZ5 121 aa7.12□□□□□ -1.27
GABPB1-208ENST00000558970 PRR4Q16378 134 aa7.11□□□□□ -1.27
GABPB1-208ENST00000558970 J3QR89 54 aa7.09□□□□□ -1.27
GABPB1-208ENST00000558970 CD164Q04900 197 aa7.08□□□□□ -1.28
GABPB1-208ENST00000558970 VPS25Q9BRG1 176 aa7.08□□□□□ -1.28
GABPB1-208ENST00000558970 LIMD2Q9BT23 127 aa7.08□□□□□ -1.28
GABPB1-208ENST00000558970 RBM3P98179 157 aaKnown RBP7.07□□□□□ -1.28
GABPB1-208ENST00000558970 TRBV7-7A0A0K0K1E9 115 aa7.05□□□□□ -1.28
GABPB1-208ENST00000558970 A0A1W2PNM2 257 aa7.05□□□□□ -1.28
GABPB1-208ENST00000558970 H3BT86 120 aa7.05□□□□□ -1.28
GABPB1-208ENST00000558970 RPS29P62273 56 aaKnown RBP7.05□□□□□ -1.28
GABPB1-208ENST00000558970 DSCR8Q96T75 97 aa7.05□□□□□ -1.28
GABPB1-208ENST00000558970 CCKP06307 115 aa7.04□□□□□ -1.28
GABPB1-208ENST00000558970 C14orf132Q9NPU4 83 aa7.04□□□□□ -1.28
GABPB1-208ENST00000558970 TRBV7-4A0A0J9YYF1 115 aa7.03□□□□□ -1.28
GABPB1-208ENST00000558970 TEN1Q86WV5 123 aa7.03□□□□□ -1.28
GABPB1-208ENST00000558970 A0A087WSZ3 146 aa7.02□□□□□ -1.29
GABPB1-208ENST00000558970 JMJD7-PLA2G4BH0Y9G9 81 aa7.02□□□□□ -1.29
GABPB1-208ENST00000558970 SMCPP49901 116 aaPredicted RBP7.02□□□□□ -1.29
GABPB1-208ENST00000558970 LPAP08519 4548 aa7□□□□□ -1.29
GABPB1-208ENST00000558970 IGLV7-46A0A075B6I9 117 aa7□□□□□ -1.29
GABPB1-208ENST00000558970 Q6Q795 121 aa7□□□□□ -1.29
GABPB1-208ENST00000558970 PRO0461Q9UI25 63 aa7□□□□□ -1.29
GABPB1-208ENST00000558970 C1orf195Q5TG92 126 aa6.98□□□□□ -1.29
GABPB1-208ENST00000558970 Q6ZQT0 140 aa6.98□□□□□ -1.29
GABPB1-208ENST00000558970 OBSCN-AS1Q96MR7 158 aa6.97□□□□□ -1.29
GABPB1-208ENST00000558970 SS18L2Q9UHA2 77 aa6.97□□□□□ -1.29
GABPB1-208ENST00000558970 LOC110117498A0A087WWA1 95 aa6.96□□□□□ -1.3
GABPB1-208ENST00000558970 Q5XG85 94 aa6.96□□□□□ -1.3
GABPB1-208ENST00000558970 FP248Q71RG6 208 aaPredicted RBP6.96□□□□□ -1.3
GABPB1-208ENST00000558970 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
GABPB1-208ENST00000558970 DEFB116Q30KQ4 102 aa6.93□□□□□ -1.3
GABPB1-208ENST00000558970 ETDBQ3ZM63 59 aa6.93□□□□□ -1.3
GABPB1-208ENST00000558970 PDE6GP18545 87 aa6.92□□□□□ -1.3
GABPB1-208ENST00000558970 ASB16-AS1Q495Z4 193 aa6.92□□□□□ -1.3
GABPB1-208ENST00000558970 Q96NJ1 140 aa6.91□□□□□ -1.3
GABPB1-208ENST00000558970 SIGMAR1Q99720 223 aa6.91□□□□□ -1.3
GABPB1-208ENST00000558970 CDIP1Q9H305 208 aa6.91□□□□□ -1.3
GABPB1-208ENST00000558970 TPRXLQ17RH7 258 aa6.9□□□□□ -1.3
GABPB1-208ENST00000558970 KRTAP13-3Q3SY46 172 aa6.89□□□□□ -1.31
GABPB1-208ENST00000558970 IGKV4-1P06312 121 aa6.88□□□□□ -1.31
GABPB1-208ENST00000558970 LINC00472Q9H8W2 130 aa6.85□□□□□ -1.31
GABPB1-208ENST00000558970 SCGB1A1P11684 91 aa6.84□□□□□ -1.31
GABPB1-208ENST00000558970 ACYP1P07311 99 aa6.83□□□□□ -1.32
GABPB1-208ENST00000558970 NREPQ16612 68 aa6.83□□□□□ -1.32
GABPB1-208ENST00000558970 C21orf62-AS1Q17RA5 79 aa6.83□□□□□ -1.32
GABPB1-208ENST00000558970 A0A1B0GW54 56 aa6.82□□□□□ -1.32
GABPB1-208ENST00000558970 FAM240AA0A1B0GVK7 77 aa6.81□□□□□ -1.32
GABPB1-208ENST00000558970 XP32Q5T750 250 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms