RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 Q5XG85 94 aa5.07□□□□□ -1.6
SPG11-212ENST00000558790 CBY1Q9Y3M2 126 aa5.07□□□□□ -1.6
SPG11-212ENST00000558790 A0A0G2JQZ4 141 aa5.06□□□□□ -1.6
SPG11-212ENST00000558790 LEPROTL1O95214 131 aa5.06□□□□□ -1.6
SPG11-212ENST00000558790 IGKCP01834 107 aa5.06□□□□□ -1.6
SPG11-212ENST00000558790 ELOF1P60002 83 aaKnown RBP5.06□□□□□ -1.6
SPG11-212ENST00000558790 OR13C6PQ8NH95 151 aa5.06□□□□□ -1.6
SPG11-212ENST00000558790 PRO1933Q9H354 126 aa5.06□□□□□ -1.6
SPG11-212ENST00000558790 SPANXCQ9NY87 97 aa5.06□□□□□ -1.6
SPG11-212ENST00000558790 APOC3P02656 99 aa5.05□□□□□ -1.6
SPG11-212ENST00000558790 DEFB105AQ8NG35 78 aa5.05□□□□□ -1.6
SPG11-212ENST00000558790 SERF1AO75920 110 aa5.04□□□□□ -1.6
SPG11-212ENST00000558790 COX7BP24311 80 aa5.04□□□□□ -1.6
SPG11-212ENST00000558790 TAL2Q16559 108 aa5.04□□□□□ -1.6
SPG11-212ENST00000558790 C6orf99Q4VX62 202 aa5.04□□□□□ -1.6
SPG11-212ENST00000558790 Q6ZVQ6 151 aa5.04□□□□□ -1.6
SPG11-212ENST00000558790 LINC00308Q8TCZ7 52 aa5.04□□□□□ -1.6
SPG11-212ENST00000558790 TEX49A0A1B0GTD5 131 aa5.03□□□□□ -1.6
SPG11-212ENST00000558790 SNAPINO95295 136 aa5.03□□□□□ -1.6
SPG11-212ENST00000558790 FABP4P15090 132 aa5.03□□□□□ -1.6
SPG11-212ENST00000558790 SVBPQ8N300 66 aa5.03□□□□□ -1.6
SPG11-212ENST00000558790 SPANXDQ9BXN6 97 aa5.03□□□□□ -1.6
SPG11-212ENST00000558790 E9PLD3 99 aa5.02□□□□□ -1.61
SPG11-212ENST00000558790 AKR1D1P51857 326 aa5.02□□□□□ -1.61
SPG11-212ENST00000558790 HSPB8Q9UJY1 196 aa5.02□□□□□ -1.61
SPG11-212ENST00000558790 Q6Q795 121 aa5.01□□□□□ -1.61
SPG11-212ENST00000558790 IGLV5-48A0A075B6I7 105 aa5□□□□□ -1.61
SPG11-212ENST00000558790 TRGC2P03986 189 aa5□□□□□ -1.61
SPG11-212ENST00000558790 NDUFA5Q16718 116 aa5□□□□□ -1.61
SPG11-212ENST00000558790 NEBP20929 6669 aa4.99□□□□□ -1.61
SPG11-212ENST00000558790 TIMM17BO60830 172 aa4.99□□□□□ -1.61
SPG11-212ENST00000558790 KRTAP6-3Q3LI67 103 aa4.99□□□□□ -1.61
SPG11-212ENST00000558790 KRTAP10-7P60409 375 aaPredicted RBP4.98□□□□□ -1.61
SPG11-212ENST00000558790 TRBV7-6A0A0J9YX20 115 aa4.97□□□□□ -1.61
SPG11-212ENST00000558790 ZNF815PA8K554 130 aa4.97□□□□□ -1.61
SPG11-212ENST00000558790 TCL1BO95988 128 aa4.97□□□□□ -1.61
SPG11-212ENST00000558790 TTTY13Q9BZ97 58 aa4.97□□□□□ -1.61
SPG11-212ENST00000558790 A0A1B0GWB2 263 aa4.96□□□□□ -1.62
SPG11-212ENST00000558790 NDUFV3P56181 108 aaKnown RBP4.96□□□□□ -1.62
SPG11-212ENST00000558790 LINC00518Q8N0U6 118 aa4.96□□□□□ -1.62
SPG11-212ENST00000558790 KRTAP20-1Q3LI63 56 aa4.95□□□□□ -1.62
SPG11-212ENST00000558790 OBSCN-AS1Q96MR7 158 aa4.95□□□□□ -1.62
SPG11-212ENST00000558790 ATP11AUNQ6ZP68 121 aa4.94□□□□□ -1.62
SPG11-212ENST00000558790 PCP2Q8IVA1 136 aa4.94□□□□□ -1.62
SPG11-212ENST00000558790 MUC12Q9UKN1 5478 aa4.94□□□□□ -1.62
SPG11-212ENST00000558790 SYS1-DBNDD2H3BUS1 97 aa4.93□□□□□ -1.62
SPG11-212ENST00000558790 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
SPG11-212ENST00000558790 TRBV7-7A0A0K0K1E9 115 aa4.91□□□□□ -1.62
SPG11-212ENST00000558790 A6NDN8 102 aa4.91□□□□□ -1.62
SPG11-212ENST00000558790 F8WEM9 126 aa4.91□□□□□ -1.62
SPG11-212ENST00000558790 LINC01545Q5VT33 79 aa4.91□□□□□ -1.62
SPG11-212ENST00000558790 MT2AP02795 61 aa4.9□□□□□ -1.63
SPG11-212ENST00000558790 DSCR10P59022 87 aa4.9□□□□□ -1.63
SPG11-212ENST00000558790 CLEC2BQ92478 149 aa4.9□□□□□ -1.63
SPG11-212ENST00000558790 OCR1Q9BZK8 76 aa4.9□□□□□ -1.63
SPG11-212ENST00000558790 NHP2Q9NX24 153 aaKnown RBP4.9□□□□□ -1.63
SPG11-212ENST00000558790 C20orf202A1L168 122 aa4.89□□□□□ -1.63
SPG11-212ENST00000558790 IGFL1Q6UW32 110 aa4.89□□□□□ -1.63
SPG11-212ENST00000558790 SCGB1D4Q6XE38 83 aa4.89□□□□□ -1.63
SPG11-212ENST00000558790 SMIM11BQ8TCY0 68 aa4.89□□□□□ -1.63
SPG11-212ENST00000558790 COPS9Q8WXC6 57 aa4.88□□□□□ -1.63
SPG11-212ENST00000558790 MT1FP04733 61 aa4.87□□□□□ -1.63
SPG11-212ENST00000558790 IFITM1P13164 125 aa4.87□□□□□ -1.63
SPG11-212ENST00000558790 Q6JHZ5 121 aa4.87□□□□□ -1.63
SPG11-212ENST00000558790 Q6ZQY7 126 aa4.87□□□□□ -1.63
SPG11-212ENST00000558790 Q96NJ1 140 aa4.87□□□□□ -1.63
SPG11-212ENST00000558790 COLCA2A8K830 154 aa4.86□□□□□ -1.63
SPG11-212ENST00000558790 MUSTN1Q8IVN3 82 aa4.86□□□□□ -1.63
SPG11-212ENST00000558790 C20orf166-AS1Q96NR2 134 aa4.86□□□□□ -1.63
SPG11-212ENST00000558790 TRAV13-2A0A0B4J235 113 aa4.85□□□□□ -1.63
SPG11-212ENST00000558790 LINC00575Q6W349 94 aa4.85□□□□□ -1.63
SPG11-212ENST00000558790 SLC7A5P1Q8MH63 180 aa4.85□□□□□ -1.63
SPG11-212ENST00000558790 TRBV20-1A0A075B6N2 111 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 A8MUU9 505 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 HIST1H2BKO60814 126 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 HIST1H2BJP06899 126 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 C3orf79P0CE67 100 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 HIST1H2BOP23527 126 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 HIST1H2BBP33778 126 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 HIST1H2BDP58876 126 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 HIST1H2BCP62807 126 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 HIST2H2BEQ16778 126 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.84□□□□□ -1.63
SPG11-212ENST00000558790 Q6ZVH6 145 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 HIST1H2BHQ93079 126 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 HIST1H2BNQ99877 126 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 HIST1H2BMQ99879 126 aa4.84□□□□□ -1.63
SPG11-212ENST00000558790 LST1O00453 97 aa4.83□□□□□ -1.64
SPG11-212ENST00000558790 OCIAD2Q56VL3 154 aa4.83□□□□□ -1.64
SPG11-212ENST00000558790 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
SPG11-212ENST00000558790 hADV29S1A0JD25 119 aa4.82□□□□□ -1.64
SPG11-212ENST00000558790 H3BUT2 72 aa4.82□□□□□ -1.64
SPG11-212ENST00000558790 KRTDAPP60985 99 aa4.81□□□□□ -1.64
SPG11-212ENST00000558790 VAMP3Q15836 100 aa4.81□□□□□ -1.64
SPG11-212ENST00000558790 ATOH7Q8N100 152 aa4.81□□□□□ -1.64
SPG11-212ENST00000558790 FAM236DA0A1B0GTK5 79 aa4.8□□□□□ -1.64
SPG11-212ENST00000558790 FAM236CP0DP71 79 aa4.8□□□□□ -1.64
SPG11-212ENST00000558790 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
SPG11-212ENST00000558790 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
SPG11-212ENST00000558790 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms