RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 Q6ZR54 194 aa10.16□□□□□ -0.78
HMBOX1-212ENST00000558662 RPL37AP61513 92 aaKnown RBP10.15□□□□□ -0.78
HMBOX1-212ENST00000558662 DEFB131BA0A096LNP1 70 aa10.14□□□□□ -0.79
HMBOX1-212ENST00000558662 MMP24-AS1A0A0U1RRL7 71 aa10.14□□□□□ -0.79
HMBOX1-212ENST00000558662 C8orf87E5RJ46 101 aa10.14□□□□□ -0.79
HMBOX1-212ENST00000558662 ZANQ9Y493 2812 aa10.13□□□□□ -0.79
HMBOX1-212ENST00000558662 ITPR3Q14573 2671 aa10.13□□□□□ -0.79
HMBOX1-212ENST00000558662 DNAH10OSP0CZ25 163 aa10.13□□□□□ -0.79
HMBOX1-212ENST00000558662 KRTAP7-1Q8IUC3 87 aa10.13□□□□□ -0.79
HMBOX1-212ENST00000558662 FAM168BA1KXE4 195 aa10.12□□□□□ -0.79
HMBOX1-212ENST00000558662 SPAG11AQ6PDA7 123 aa10.12□□□□□ -0.79
HMBOX1-212ENST00000558662 AKAP9Q99996 3911 aa10.12□□□□□ -0.79
HMBOX1-212ENST00000558662 H0Y9J4 135 aa10.1□□□□□ -0.79
HMBOX1-212ENST00000558662 ITPR2Q14571 2701 aa10.1□□□□□ -0.79
HMBOX1-212ENST00000558662 TEX15Q9BXT5 2789 aa10.09□□□□□ -0.79
HMBOX1-212ENST00000558662 PLA2G1BP04054 148 aaKnown RBP10.08□□□□□ -0.8
HMBOX1-212ENST00000558662 SPINK7P58062 85 aa10.07□□□□□ -0.8
HMBOX1-212ENST00000558662 ZNF469Q96JG9 3925 aaPredicted RBP10.06□□□□□ -0.8
HMBOX1-212ENST00000558662 C11orf45Q8TAV5 145 aa10.06□□□□□ -0.8
HMBOX1-212ENST00000558662 HRES1P13985 223 aa10.05□□□□□ -0.8
HMBOX1-212ENST00000558662 KRTAP10-3P60369 221 aa10.05□□□□□ -0.8
HMBOX1-212ENST00000558662 FASNP49327 2511 aaKnown RBP10.05□□□□□ -0.8
HMBOX1-212ENST00000558662 CCDC168Q8NDH2 2452 aa10.05□□□□□ -0.8
HMBOX1-212ENST00000558662 IGKV2-24A0A0C4DH68 120 aa10.04□□□□□ -0.8
HMBOX1-212ENST00000558662 FLNAP21333 2647 aaKnown RBP10.04□□□□□ -0.8
HMBOX1-212ENST00000558662 PCOTHQ58A44 107 aa10.03□□□□□ -0.8
HMBOX1-212ENST00000558662 HECTD1Q9ULT8 2610 aa10.03□□□□□ -0.8
HMBOX1-212ENST00000558662 LINC00313P59037 77 aa10.02□□□□□ -0.81
HMBOX1-212ENST00000558662 ANK3Q12955 4377 aaKnown RBP10.02□□□□□ -0.81
HMBOX1-212ENST00000558662 A0A0G2JQZ4 141 aa10.01□□□□□ -0.81
HMBOX1-212ENST00000558662 A0A1W2PNN7 141 aa10.01□□□□□ -0.81
HMBOX1-212ENST00000558662 HIVEP2P31629 2446 aa9.99□□□□□ -0.81
HMBOX1-212ENST00000558662 LINC01554Q52M75 96 aa9.98□□□□□ -0.81
HMBOX1-212ENST00000558662 C8orf17Q9NRJ1 99 aa9.97□□□□□ -0.81
HMBOX1-212ENST00000558662 PRLHP81277 87 aa9.96□□□□□ -0.81
HMBOX1-212ENST00000558662 SMR3AQ99954 134 aa9.96□□□□□ -0.81
HMBOX1-212ENST00000558662 OTOGQ6ZRI0 2925 aa9.94□□□□□ -0.82
HMBOX1-212ENST00000558662 ACANP16112 2415 aa9.94□□□□□ -0.82
HMBOX1-212ENST00000558662 NBEAL2Q6ZNJ1 2754 aa9.93□□□□□ -0.82
HMBOX1-212ENST00000558662 ACYP2P14621 99 aa9.93□□□□□ -0.82
HMBOX1-212ENST00000558662 SONP18583 2426 aaKnown RBP9.92□□□□□ -0.82
HMBOX1-212ENST00000558662 SPATA8Q6RVD6 105 aa9.9□□□□□ -0.82
HMBOX1-212ENST00000558662 MRPL34Q9BQ48 92 aaKnown RBP9.9□□□□□ -0.82
HMBOX1-212ENST00000558662 A0A1B0GVX0 72 aa9.89□□□□□ -0.83
HMBOX1-212ENST00000558662 Q96NJ1 140 aa9.89□□□□□ -0.83
HMBOX1-212ENST00000558662 RTL8CO15255 209 aa9.88□□□□□ -0.83
HMBOX1-212ENST00000558662 NIPBLQ6KC79 2804 aaeCLIP9.87□□□□□ -0.83
HMBOX1-212ENST00000558662 CDK2AP2O75956 126 aa9.86□□□□□ -0.83
HMBOX1-212ENST00000558662 INAFM1C9JVW0 142 aa9.85□□□□□ -0.83
HMBOX1-212ENST00000558662 NF1P21359 2839 aa9.85□□□□□ -0.83
HMBOX1-212ENST00000558662 A0A096LNI7 61 aa9.84□□□□□ -0.83
HMBOX1-212ENST00000558662 MDFIQ99750 246 aa9.84□□□□□ -0.83
HMBOX1-212ENST00000558662 CASC10Q5T4H9 136 aa9.83□□□□□ -0.84
HMBOX1-212ENST00000558662 NOTCH2Q04721 2471 aa9.83□□□□□ -0.84
HMBOX1-212ENST00000558662 PRAC1Q96KF2 57 aa9.81□□□□□ -0.84
HMBOX1-212ENST00000558662 HIVEP1P15822 2718 aa9.81□□□□□ -0.84
HMBOX1-212ENST00000558662 RETNLBQ9BQ08 111 aa9.8□□□□□ -0.84
HMBOX1-212ENST00000558662 MTORP42345 2549 aa9.8□□□□□ -0.84
HMBOX1-212ENST00000558662 C14orf177Q52M58 125 aa9.8□□□□□ -0.84
HMBOX1-212ENST00000558662 SETD2Q9BYW2 2564 aaPredicted RBP9.79□□□□□ -0.84
HMBOX1-212ENST00000558662 A0A1B0GU69 56 aa9.79□□□□□ -0.84
HMBOX1-212ENST00000558662 PRR26Q8N8Z3 221 aa9.79□□□□□ -0.84
HMBOX1-212ENST00000558662 DMAC1Q96GE9 116 aa9.79□□□□□ -0.84
HMBOX1-212ENST00000558662 NSD1Q96L73 2696 aaPredicted RBP9.79□□□□□ -0.84
HMBOX1-212ENST00000558662 CUBNO60494 3623 aa9.77□□□□□ -0.85
HMBOX1-212ENST00000558662 H3BS24 57 aa9.77□□□□□ -0.85
HMBOX1-212ENST00000558662 UQCR11O14957 56 aa9.77□□□□□ -0.85
HMBOX1-212ENST00000558662 IGHV6-1A0A0B4J1U7 121 aa9.75□□□□□ -0.85
HMBOX1-212ENST00000558662 KRTAP13-3Q3SY46 172 aa9.75□□□□□ -0.85
HMBOX1-212ENST00000558662 KRTAP13-1Q8IUC0 172 aa9.75□□□□□ -0.85
HMBOX1-212ENST00000558662 LINC00483Q53H64 154 aa9.74□□□□□ -0.85
HMBOX1-212ENST00000558662 MIR22HGQ0VDD5 57 aa9.73□□□□□ -0.85
HMBOX1-212ENST00000558662 ZNF706Q9Y5V0 76 aaPredicted RBP9.72□□□□□ -0.85
HMBOX1-212ENST00000558662 FLNBO75369 2602 aaKnown RBP9.69□□□□□ -0.86
HMBOX1-212ENST00000558662 BAHCC1Q9P281 2608 aa9.69□□□□□ -0.86
HMBOX1-212ENST00000558662 ADM2Q7Z4H4 148 aa9.68□□□□□ -0.86
HMBOX1-212ENST00000558662 F8P00451 2351 aa9.68□□□□□ -0.86
HMBOX1-212ENST00000558662 KRTAP11-1Q8IUC1 163 aa9.65□□□□□ -0.86
HMBOX1-212ENST00000558662 ALMS1Q8TCU4 4167 aa9.65□□□□□ -0.87
HMBOX1-212ENST00000558662 TENM2Q9NT68 2774 aa9.64□□□□□ -0.87
HMBOX1-212ENST00000558662 IGLV9-49A0A0B4J1Y8 123 aa9.61□□□□□ -0.87
HMBOX1-212ENST00000558662 CHTF8P0CG12 524 aa9.61□□□□□ -0.87
HMBOX1-212ENST00000558662 FAM229AH3BQW9 127 aa9.6□□□□□ -0.87
HMBOX1-212ENST00000558662 Q5W150 140 aa9.6□□□□□ -0.87
HMBOX1-212ENST00000558662 KRTAP10-11P60412 298 aa9.58□□□□□ -0.88
HMBOX1-212ENST00000558662 KRTAP24-1Q3LI83 254 aa9.58□□□□□ -0.88
HMBOX1-212ENST00000558662 CSAG1Q6PB30 78 aa9.57□□□□□ -0.88
HMBOX1-212ENST00000558662 WWC2-AS2Q96NR7 200 aa9.56□□□□□ -0.88
HMBOX1-212ENST00000558662 K7EIL1 84 aa9.53□□□□□ -0.88
HMBOX1-212ENST00000558662 NOTCH2NLQ7Z3S9 236 aa9.53□□□□□ -0.88
HMBOX1-212ENST00000558662 IGKV2-30P06310 120 aa9.52□□□□□ -0.89
HMBOX1-212ENST00000558662 ZNF861PO60384 105 aa9.51□□□□□ -0.89
HMBOX1-212ENST00000558662 DNAH1Q9P2D7 4330 aa9.5□□□□□ -0.89
HMBOX1-212ENST00000558662 OXLD1Q5BKU9 147 aa9.5□□□□□ -0.89
HMBOX1-212ENST00000558662 VWFP04275 2813 aa9.5□□□□□ -0.89
HMBOX1-212ENST00000558662 TENM1Q9UKZ4 2725 aa9.49□□□□□ -0.89
HMBOX1-212ENST00000558662 IGLV7-43P04211 117 aa9.48□□□□□ -0.89
HMBOX1-212ENST00000558662 TEP1Q99973 2627 aaKnown RBP9.48□□□□□ -0.89
HMBOX1-212ENST00000558662 ATRQ13535 2644 aa9.44□□□□□ -0.9
HMBOX1-212ENST00000558662 KRTAP1-5Q9BYS1 174 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms