RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 H0Y8G0 127 aa3.32□□□□□ -1.88
LRRC28-207ENST00000558500 COX7BP24311 80 aa3.32□□□□□ -1.88
LRRC28-207ENST00000558500 ELOF1P60002 83 aaKnown RBP3.32□□□□□ -1.88
LRRC28-207ENST00000558500 NPC2P61916 151 aa3.32□□□□□ -1.88
LRRC28-207ENST00000558500 COX19Q49B96 90 aa3.32□□□□□ -1.88
LRRC28-207ENST00000558500 C18orf32Q8TCD1 76 aa3.32□□□□□ -1.88
LRRC28-207ENST00000558500 SEC11CQ9BY50 192 aa3.32□□□□□ -1.88
LRRC28-207ENST00000558500 LEPROTO15243 131 aa3.31□□□□□ -1.88
LRRC28-207ENST00000558500 RHEBQ15382 184 aa3.31□□□□□ -1.88
LRRC28-207ENST00000558500 Q96NJ1 140 aa3.31□□□□□ -1.88
LRRC28-207ENST00000558500 IGLV5-48A0A075B6I7 105 aa3.3□□□□□ -1.88
LRRC28-207ENST00000558500 A8MUU9 505 aa3.3□□□□□ -1.88
LRRC28-207ENST00000558500 J3QQQ9 107 aa3.3□□□□□ -1.88
LRRC28-207ENST00000558500 S100PP25815 95 aa3.3□□□□□ -1.88
LRRC28-207ENST00000558500 OR13C6PQ8NH95 151 aa3.3□□□□□ -1.88
LRRC28-207ENST00000558500 IFI27L1Q96BM0 104 aa3.3□□□□□ -1.88
LRRC28-207ENST00000558500 NMUP48645 174 aa3.29□□□□□ -1.88
LRRC28-207ENST00000558500 IGFL1Q6UW32 110 aa3.29□□□□□ -1.88
LRRC28-207ENST00000558500 LITAFQ99732 161 aa3.29□□□□□ -1.88
LRRC28-207ENST00000558500 SPANXDQ9BXN6 97 aa3.29□□□□□ -1.88
LRRC28-207ENST00000558500 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
LRRC28-207ENST00000558500 SPANXCQ9NY87 97 aa3.28□□□□□ -1.88
LRRC28-207ENST00000558500 KMT2DO14686 5537 aa3.27□□□□□ -1.89
LRRC28-207ENST00000558500 A0A0J9YXY3 114 aa3.27□□□□□ -1.89
LRRC28-207ENST00000558500 TRBV7-7A0A0K0K1E9 115 aa3.27□□□□□ -1.89
LRRC28-207ENST00000558500 PCP4L1A6NKN8 68 aa3.27□□□□□ -1.89
LRRC28-207ENST00000558500 KRTAP16-1A8MUX0 517 aa3.27□□□□□ -1.89
LRRC28-207ENST00000558500 HRES1P13985 223 aa3.27□□□□□ -1.89
LRRC28-207ENST00000558500 RBM12B-AS1Q9P1G2 102 aa3.27□□□□□ -1.89
LRRC28-207ENST00000558500 TRBV7-6A0A0J9YX20 115 aa3.26□□□□□ -1.89
LRRC28-207ENST00000558500 NDUFV3P56181 108 aaKnown RBP3.26□□□□□ -1.89
LRRC28-207ENST00000558500 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
LRRC28-207ENST00000558500 LINC00308Q8TCZ7 52 aa3.26□□□□□ -1.89
LRRC28-207ENST00000558500 A0A1B0GWB2 263 aa3.25□□□□□ -1.89
LRRC28-207ENST00000558500 OCR1Q9BZK8 76 aa3.25□□□□□ -1.89
LRRC28-207ENST00000558500 TRAPPC1Q9Y5R8 145 aa3.25□□□□□ -1.89
LRRC28-207ENST00000558500 F8WEM9 126 aa3.24□□□□□ -1.89
LRRC28-207ENST00000558500 HERVK_113P61574 105 aa3.24□□□□□ -1.89
LRRC28-207ENST00000558500 Q6JHZ5 121 aa3.24□□□□□ -1.89
LRRC28-207ENST00000558500 CLEC2BQ92478 149 aa3.24□□□□□ -1.89
LRRC28-207ENST00000558500 CHCHD1Q96BP2 118 aaKnown RBP3.24□□□□□ -1.89
LRRC28-207ENST00000558500 LST1O00453 97 aa3.23□□□□□ -1.89
LRRC28-207ENST00000558500 PLNP26678 52 aa3.23□□□□□ -1.89
LRRC28-207ENST00000558500 SEC61GP60059 68 aa3.23□□□□□ -1.89
LRRC28-207ENST00000558500 Q6ZVH6 145 aa3.23□□□□□ -1.89
LRRC28-207ENST00000558500 TMEM218A2RU14 115 aa3.22□□□□□ -1.89
LRRC28-207ENST00000558500 A8MWP4 228 aa3.22□□□□□ -1.89
LRRC28-207ENST00000558500 DPM2O94777 84 aa3.22□□□□□ -1.89
LRRC28-207ENST00000558500 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
LRRC28-207ENST00000558500 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
LRRC28-207ENST00000558500 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
LRRC28-207ENST00000558500 NHP2Q9NX24 153 aaKnown RBP3.21□□□□□ -1.9
LRRC28-207ENST00000558500 TRAV13-2A0A0B4J235 113 aa3.2□□□□□ -1.9
LRRC28-207ENST00000558500 E9PLD3 99 aa3.2□□□□□ -1.9
LRRC28-207ENST00000558500 TIMM17BO60830 172 aa3.2□□□□□ -1.9
LRRC28-207ENST00000558500 IGKCP01834 107 aa3.2□□□□□ -1.9
LRRC28-207ENST00000558500 DSCR10P59022 87 aa3.2□□□□□ -1.9
LRRC28-207ENST00000558500 MTURNQ8N3F0 131 aa3.2□□□□□ -1.9
LRRC28-207ENST00000558500 PMCHL2Q9BQD1 86 aa3.2□□□□□ -1.9
LRRC28-207ENST00000558500 ZNF815PA8K554 130 aa3.19□□□□□ -1.9
LRRC28-207ENST00000558500 HSBP1O75506 76 aa3.19□□□□□ -1.9
LRRC28-207ENST00000558500 OCIAD2Q56VL3 154 aa3.19□□□□□ -1.9
LRRC28-207ENST00000558500 UQCC3Q6UW78 93 aa3.19□□□□□ -1.9
LRRC28-207ENST00000558500 A6NDN8 102 aa3.18□□□□□ -1.9
LRRC28-207ENST00000558500 A6NN06 94 aa3.18□□□□□ -1.9
LRRC28-207ENST00000558500 SERF1AO75920 110 aa3.18□□□□□ -1.9
LRRC28-207ENST00000558500 LEPROTL1O95214 131 aa3.18□□□□□ -1.9
LRRC28-207ENST00000558500 SS18L2Q9UHA2 77 aa3.18□□□□□ -1.9
LRRC28-207ENST00000558500 SLC7A5P1Q8MH63 180 aa3.17□□□□□ -1.9
LRRC28-207ENST00000558500 CLLU1Q5K131 121 aa3.16□□□□□ -1.9
LRRC28-207ENST00000558500 Q6ZQY7 126 aa3.16□□□□□ -1.9
LRRC28-207ENST00000558500 SMIM11BQ8TCY0 68 aa3.15□□□□□ -1.91
LRRC28-207ENST00000558500 HSPB8Q9UJY1 196 aa3.15□□□□□ -1.91
LRRC28-207ENST00000558500 COLCA2A8K830 154 aa3.14□□□□□ -1.91
LRRC28-207ENST00000558500 H3BUT2 72 aa3.14□□□□□ -1.91
LRRC28-207ENST00000558500 FABP4P15090 132 aa3.14□□□□□ -1.91
LRRC28-207ENST00000558500 LINC00313P59037 77 aa3.14□□□□□ -1.91
LRRC28-207ENST00000558500 LINC00575Q6W349 94 aa3.14□□□□□ -1.91
LRRC28-207ENST00000558500 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
LRRC28-207ENST00000558500 hADV29S1A0JD25 119 aa3.13□□□□□ -1.91
LRRC28-207ENST00000558500 SIGMAR1Q99720 223 aa3.13□□□□□ -1.91
LRRC28-207ENST00000558500 TTTY13Q9BZ97 58 aa3.13□□□□□ -1.91
LRRC28-207ENST00000558500 A0A087WSZ3 146 aa3.12□□□□□ -1.91
LRRC28-207ENST00000558500 IFITM1P13164 125 aa3.12□□□□□ -1.91
LRRC28-207ENST00000558500 VAMP3Q15836 100 aa3.12□□□□□ -1.91
LRRC28-207ENST00000558500 TEN1Q86WV5 123 aa3.12□□□□□ -1.91
LRRC28-207ENST00000558500 PPDPFLQ8WWR9 84 aa3.12□□□□□ -1.91
LRRC28-207ENST00000558500 COPS9Q8WXC6 57 aa3.12□□□□□ -1.91
LRRC28-207ENST00000558500 SNHG12Q9BXW3 62 aa3.12□□□□□ -1.91
LRRC28-207ENST00000558500 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
LRRC28-207ENST00000558500 SPINK7P58062 85 aa3.11□□□□□ -1.91
LRRC28-207ENST00000558500 MT1BP07438 61 aa3.1□□□□□ -1.91
LRRC28-207ENST00000558500 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.1□□□□□ -1.91
LRRC28-207ENST00000558500 MUSTN1Q8IVN3 82 aa3.1□□□□□ -1.91
LRRC28-207ENST00000558500 YPEL4Q96NS1 127 aa3.1□□□□□ -1.91
LRRC28-207ENST00000558500 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
LRRC28-207ENST00000558500 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
LRRC28-207ENST00000558500 KRTAP10-5P60370 271 aa3.09□□□□□ -1.91
LRRC28-207ENST00000558500 SCGB1D4Q6XE38 83 aa3.09□□□□□ -1.91
LRRC28-207ENST00000558500 A0A1W2PNM2 257 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms