RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 CREBBPQ92793 2442 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 A0A087WTM6 91 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 ZCCHC23Q6ZST2 131 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 BAGE2Q86Y30 109 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 RHPN1-AS1Q9BWJ2 59 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 R4GMQ9 66 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 CACNA1AO00555 2505 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 TRBV25-1A0A075B6N4 114 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 F8WEM9 126 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 MGPP08493 103 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 ZNF56Q15929 161 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 DEFB112Q30KQ8 113 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 PIGYQ3MUY2 71 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 FAM223AQ8IWN6 122 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 CDKN2A-AS1Q9UH64 79 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 CACNA1HO95180 2353 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 NUMA1Q14980 2115 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 TRAV22A0A0B4J277 110 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 hADV29S1A0JD25 119 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 CRYM-AS1A6NIL9 109 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 GCHFRP30047 84 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 UBE2L3P68036 154 aaKnown RBP0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 GTF2H5Q6ZYL4 71 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 C10orf95Q9H7T3 257 aa0.49□□□□□ -2.33
CTDSPL2-202ENST00000558373 H3BUT2 72 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 AKAIN1P0CW23 69 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 KRTAP19-2Q3LHN2 52 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 TMEM170BQ5T4T1 132 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 C9orf153Q5TBE3 101 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 LINC01590Q5TEZ4 76 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 MINOS1Q5TGZ0 78 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 LINC00643Q86TS7 51 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 UNC79Q9P2D8 2635 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 MUC12Q9UKN1 5478 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 SYNE2Q8WXH0 6885 aaKnown RBP0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 A0A096LNT2 108 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 MYMXA0A1B0GTQ4 84 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 ZNF137PP52743 207 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 KLK9Q2XQG4 91 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 FDCSPQ8NFU4 85 aa0.48□□□□□ -2.33
CTDSPL2-202ENST00000558373 UBE2L5PA0A1B0GUS4 154 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 USP24Q9UPU5 2620 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 NCOR1O75376 2440 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 MUC6Q6W4X9 2439 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 CACNA1DQ01668 2161 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 ARFGEF3Q5TH69 2177 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 PIEZO1Q92508 2521 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 H0YGG7 62 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 CLPSL2Q6UWE3 100 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 EP300Q09472 2414 aaPredicted RBP0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 SSBP3-AS1Q7Z2R9 100 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 Q8N6K4 173 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 UBL5Q9BZL1 73 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 MUC19Q7Z5P9 8384 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 MAP1BP46821 2468 aaKnown RBP0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 ICE1Q9Y2F5 2266 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 PTPRZ1P23471 2315 aaPredicted RBP0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 SNRNP200O75643 2136 aaKnown RBP0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 SPATA8Q6RVD6 105 aa0.47□□□□□ -2.33
CTDSPL2-202ENST00000558373 ZFYVE26Q68DK2 2539 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 NCOR2Q9Y618 2525 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 CACNA1EQ15878 2313 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 HCG22E2RYF7 251 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 SPINT3P49223 89 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 FXYD4P59646 89 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 C5orf56Q8N8D9 126 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 LINC01558Q9Y6Z2 57 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 ITPR3Q14573 2671 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 PCNX1Q96RV3 2341 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 M0R1W7 72 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 UQCR11O14957 56 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 SPINK6Q6UWN8 80 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 ASCC3Q8N3C0 2202 aaKnown RBP0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 FAM208BQ5VWN6 2430 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 TRAV12-3A0A0B4J271 114 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 A0A1B0GUT8 65 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 COX6A2Q02221 97 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 PKD1L2Q7Z442 2459 aa0.46□□□□□ -2.34
CTDSPL2-202ENST00000558373 BAHCC1Q9P281 2608 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 ACYP2P14621 99 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 FXYD3Q14802 87 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 PLAC4Q8WY50 150 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 NXT2Q9NPJ8 142 aaKnown RBP0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 FREM1Q5H8C1 2179 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 K7EIL1 84 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 SPINK1P00995 79 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 APOC2P02655 101 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 CRIP1P50238 77 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 C9orf116Q5BN46 136 aaPredicted RBP0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 CSAG1Q6PB30 78 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 TOMM5Q8N4H5 51 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 CCL19Q99731 98 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 WNK2Q9Y3S1 2297 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 SMIM13P0DJ93 91 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 PRB4P10163 310 aaPredicted RBP0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 RPL37P61927 97 aaKnown RBP0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 KCNQ1DNQ9H478 68 aa0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 DMBT1Q9UGM3 2413 aaPredicted RBP0.45□□□□□ -2.34
CTDSPL2-202ENST00000558373 M0QZ58 72 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms