RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 ASPMQ8IZT6 3477 aa7.59□□□□□ -1.19
CSPG4P12-201ENST00000558282 A0A0A0MQY5 61 aa7.59□□□□□ -1.19
CSPG4P12-201ENST00000558282 RTL8CO15255 209 aa7.59□□□□□ -1.19
CSPG4P12-201ENST00000558282 A0A096LNT2 108 aa7.59□□□□□ -1.19
CSPG4P12-201ENST00000558282 ZNF575Q86XF7 245 aa7.58□□□□□ -1.2
CSPG4P12-201ENST00000558282 A0A0G2JQZ4 141 aa7.57□□□□□ -1.2
CSPG4P12-201ENST00000558282 NBDYA0A0U1RRE5 68 aa7.57□□□□□ -1.2
CSPG4P12-201ENST00000558282 A0A1W2PNN7 141 aa7.57□□□□□ -1.2
CSPG4P12-201ENST00000558282 CSAG1Q6PB30 78 aa7.57□□□□□ -1.2
CSPG4P12-201ENST00000558282 ATRQ13535 2644 aa7.57□□□□□ -1.2
CSPG4P12-201ENST00000558282 CFAP46Q8IYW2 2715 aa7.57□□□□□ -1.2
CSPG4P12-201ENST00000558282 ZNF861PO60384 105 aa7.57□□□□□ -1.2
CSPG4P12-201ENST00000558282 COL27A1Q8IZC6 1860 aaPredicted RBP7.56□□□□□ -1.2
CSPG4P12-201ENST00000558282 LOC400499M0QZD8 3231 aa7.56□□□□□ -1.2
CSPG4P12-201ENST00000558282 A0A1B0GU33 70 aa7.56□□□□□ -1.2
CSPG4P12-201ENST00000558282 COL12A1Q99715 3063 aa7.56□□□□□ -1.2
CSPG4P12-201ENST00000558282 SMR3AQ99954 134 aa7.54□□□□□ -1.2
CSPG4P12-201ENST00000558282 DCHS1Q96JQ0 3298 aa7.53□□□□□ -1.2
CSPG4P12-201ENST00000558282 MGAM2Q2M2H8 2515 aa7.53□□□□□ -1.2
CSPG4P12-201ENST00000558282 ZZEF1O43149 2961 aa7.53□□□□□ -1.2
CSPG4P12-201ENST00000558282 SPINK7P58062 85 aa7.52□□□□□ -1.21
CSPG4P12-201ENST00000558282 IGSF10Q6WRI0 2623 aa7.51□□□□□ -1.21
CSPG4P12-201ENST00000558282 GIG44P09565 113 aaPredicted RBP7.51□□□□□ -1.21
CSPG4P12-201ENST00000558282 HRES1P13985 223 aa7.51□□□□□ -1.21
CSPG4P12-201ENST00000558282 CNBPP62633 177 aaKnown RBP7.51□□□□□ -1.21
CSPG4P12-201ENST00000558282 A0A0D9SG42 100 aa7.49□□□□□ -1.21
CSPG4P12-201ENST00000558282 LAMA5O15230 3695 aa7.49□□□□□ -1.21
CSPG4P12-201ENST00000558282 ATMQ13315 3056 aa7.49□□□□□ -1.21
CSPG4P12-201ENST00000558282 MMP24-AS1A0A0U1RRL7 71 aa7.47□□□□□ -1.21
CSPG4P12-201ENST00000558282 KALRNO60229 2985 aa7.47□□□□□ -1.21
CSPG4P12-201ENST00000558282 Q8N1X5 172 aa7.47□□□□□ -1.21
CSPG4P12-201ENST00000558282 MAST4O15021 2626 aa7.47□□□□□ -1.21
CSPG4P12-201ENST00000558282 C19orf73Q9NVV2 129 aa7.46□□□□□ -1.21
CSPG4P12-201ENST00000558282 TEP1Q99973 2627 aaKnown RBP7.45□□□□□ -1.22
CSPG4P12-201ENST00000558282 FLNCQ14315 2725 aa7.45□□□□□ -1.22
CSPG4P12-201ENST00000558282 LINC00304Q8N9R0 145 aa7.43□□□□□ -1.22
CSPG4P12-201ENST00000558282 IGLV7-43P04211 117 aa7.39□□□□□ -1.23
CSPG4P12-201ENST00000558282 BAHCC1Q9P281 2608 aa7.38□□□□□ -1.23
CSPG4P12-201ENST00000558282 FLNAP21333 2647 aaKnown RBP7.38□□□□□ -1.23
CSPG4P12-201ENST00000558282 WDFY3Q8IZQ1 3526 aa7.38□□□□□ -1.23
CSPG4P12-201ENST00000558282 ADGRG4Q8IZF6 3080 aa7.38□□□□□ -1.23
CSPG4P12-201ENST00000558282 LINC00483Q53H64 154 aa7.38□□□□□ -1.23
CSPG4P12-201ENST00000558282 A6NN06 94 aa7.37□□□□□ -1.23
CSPG4P12-201ENST00000558282 SPRR1AP35321 89 aa7.37□□□□□ -1.23
CSPG4P12-201ENST00000558282 KRTAP16-1A8MUX0 517 aa7.36□□□□□ -1.23
CSPG4P12-201ENST00000558282 PSORS1C2Q9UIG4 136 aa7.36□□□□□ -1.23
CSPG4P12-201ENST00000558282 LINC00472Q9H8W2 130 aa7.36□□□□□ -1.23
CSPG4P12-201ENST00000558282 ZCCHC13Q8WW36 166 aaKnown RBP7.34□□□□□ -1.23
CSPG4P12-201ENST00000558282 CR1P17927 2039 aa7.34□□□□□ -1.23
CSPG4P12-201ENST00000558282 ROMO1P60602 79 aa7.33□□□□□ -1.24
CSPG4P12-201ENST00000558282 ITPR3Q14573 2671 aa7.33□□□□□ -1.24
CSPG4P12-201ENST00000558282 ANAPC11Q9NYG5 84 aa7.33□□□□□ -1.24
CSPG4P12-201ENST00000558282 SPRR1BP22528 89 aa7.33□□□□□ -1.24
CSPG4P12-201ENST00000558282 SETXQ7Z333 2677 aaKnown RBP7.32□□□□□ -1.24
CSPG4P12-201ENST00000558282 C9orf92A6NGG3 77 aa7.32□□□□□ -1.24
CSPG4P12-201ENST00000558282 GCN1Q92616 2671 aaKnown RBP7.31□□□□□ -1.24
CSPG4P12-201ENST00000558282 A0A087WTM6 91 aa7.3□□□□□ -1.24
CSPG4P12-201ENST00000558282 SPATA8Q6RVD6 105 aa7.3□□□□□ -1.24
CSPG4P12-201ENST00000558282 Q5W150 140 aa7.29□□□□□ -1.24
CSPG4P12-201ENST00000558282 Q8NDZ9 215 aa7.29□□□□□ -1.24
CSPG4P12-201ENST00000558282 RELNP78509 3460 aa7.29□□□□□ -1.24
CSPG4P12-201ENST00000558282 TNP2Q05952 138 aa7.29□□□□□ -1.24
CSPG4P12-201ENST00000558282 CASC10Q5T4H9 136 aa7.27□□□□□ -1.25
CSPG4P12-201ENST00000558282 RPL37P61927 97 aaKnown RBP7.27□□□□□ -1.25
CSPG4P12-201ENST00000558282 A0A087X002 238 aa7.27□□□□□ -1.25
CSPG4P12-201ENST00000558282 Q6ZR54 194 aa7.27□□□□□ -1.25
CSPG4P12-201ENST00000558282 NBEAL2Q6ZNJ1 2754 aa7.26□□□□□ -1.25
CSPG4P12-201ENST00000558282 ITPR1Q14643 2758 aa7.26□□□□□ -1.25
CSPG4P12-201ENST00000558282 NOTCH1P46531 2555 aa7.25□□□□□ -1.25
CSPG4P12-201ENST00000558282 UNC79Q9P2D8 2635 aa7.25□□□□□ -1.25
CSPG4P12-201ENST00000558282 TACC2O95359 2948 aa7.25□□□□□ -1.25
CSPG4P12-201ENST00000558282 SMG1Q96Q15 3661 aaKnown RBP7.24□□□□□ -1.25
CSPG4P12-201ENST00000558282 KRTAP29-1A8MX34 341 aaPredicted RBP7.22□□□□□ -1.25
CSPG4P12-201ENST00000558282 ITPR2Q14571 2701 aa7.22□□□□□ -1.25
CSPG4P12-201ENST00000558282 LCE6AA0A183 80 aa7.22□□□□□ -1.25
CSPG4P12-201ENST00000558282 ASH1LQ9NR48 2969 aaKnown RBP7.21□□□□□ -1.26
CSPG4P12-201ENST00000558282 KRTAP25-1Q3LHN0 102 aa7.2□□□□□ -1.26
CSPG4P12-201ENST00000558282 CAMK2N1Q7Z7J9 78 aa7.2□□□□□ -1.26
CSPG4P12-201ENST00000558282 H1FX-AS1Q4G0G2 97 aa7.2□□□□□ -1.26
CSPG4P12-201ENST00000558282 CRYBG3Q68DQ2 2970 aa7.19□□□□□ -1.26
CSPG4P12-201ENST00000558282 UTP20O75691 2785 aaKnown RBP7.18□□□□□ -1.26
CSPG4P12-201ENST00000558282 TEX15Q9BXT5 2789 aa7.18□□□□□ -1.26
CSPG4P12-201ENST00000558282 KRTAP24-1Q3LI83 254 aa7.18□□□□□ -1.26
CSPG4P12-201ENST00000558282 COX6B2Q6YFQ2 88 aa7.18□□□□□ -1.26
CSPG4P12-201ENST00000558282 KRTAP26-1Q6PEX3 210 aa7.17□□□□□ -1.26
CSPG4P12-201ENST00000558282 KRTAP10-11P60412 298 aa7.17□□□□□ -1.26
CSPG4P12-201ENST00000558282 SEC61BP60468 96 aaKnown RBP7.16□□□□□ -1.26
CSPG4P12-201ENST00000558282 COL6A5A8TX70 2615 aa7.14□□□□□ -1.27
CSPG4P12-201ENST00000558282 LRBAP50851 2863 aa7.14□□□□□ -1.27
CSPG4P12-201ENST00000558282 ZFHX4Q86UP3 3567 aa7.14□□□□□ -1.27
CSPG4P12-201ENST00000558282 UBR5O95071 2799 aaPredicted RBP7.13□□□□□ -1.27
CSPG4P12-201ENST00000558282 K7EIL1 84 aa7.11□□□□□ -1.27
CSPG4P12-201ENST00000558282 STAB1Q9NY15 2570 aa7.11□□□□□ -1.27
CSPG4P12-201ENST00000558282 S4R3F8 94 aa7.11□□□□□ -1.27
CSPG4P12-201ENST00000558282 NBEAL1Q6ZS30 2694 aa7.1□□□□□ -1.27
CSPG4P12-201ENST00000558282 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.09□□□□□ -1.27
CSPG4P12-201ENST00000558282 KRTAP10-3P60369 221 aa7.09□□□□□ -1.27
CSPG4P12-201ENST00000558282 WWC2-AS2Q96NR7 200 aa7.08□□□□□ -1.28
CSPG4P12-201ENST00000558282 CELSR2Q9HCU4 2923 aa7.08□□□□□ -1.28
CSPG4P12-201ENST00000558282 KRTAP1-3Q8IUG1 177 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms