RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 CLEC2BQ92478 149 aa4.56□□□□□ -1.68
SPG11-205ENST00000558080 CBY1Q9Y3M2 126 aa4.56□□□□□ -1.68
SPG11-205ENST00000558080 LRP2P98164 4655 aa4.56□□□□□ -1.68
SPG11-205ENST00000558080 H3BT86 120 aa4.55□□□□□ -1.68
SPG11-205ENST00000558080 SLC25A20O43772 301 aa4.55□□□□□ -1.68
SPG11-205ENST00000558080 VPREB1P12018 145 aa4.55□□□□□ -1.68
SPG11-205ENST00000558080 MTURNQ8N3F0 131 aa4.55□□□□□ -1.68
SPG11-205ENST00000558080 Q8NDZ9 215 aa4.55□□□□□ -1.68
SPG11-205ENST00000558080 C22orf24Q9Y442 160 aa4.55□□□□□ -1.68
SPG11-205ENST00000558080 K7ERU9 68 aa4.54□□□□□ -1.68
SPG11-205ENST00000558080 M0R378 163 aa4.54□□□□□ -1.68
SPG11-205ENST00000558080 IGLV6-57P01721 117 aa4.54□□□□□ -1.68
SPG11-205ENST00000558080 OCIAD2Q56VL3 154 aa4.54□□□□□ -1.68
SPG11-205ENST00000558080 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
SPG11-205ENST00000558080 ANKRD29Q8N6D5 301 aa4.54□□□□□ -1.68
SPG11-205ENST00000558080 TRAV23DV6A0A075B6W5 121 aa4.53□□□□□ -1.68
SPG11-205ENST00000558080 A0A1B0GX51 115 aa4.53□□□□□ -1.68
SPG11-205ENST00000558080 SNCGO76070 127 aa4.53□□□□□ -1.68
SPG11-205ENST00000558080 DNAL4O96015 105 aa4.53□□□□□ -1.68
SPG11-205ENST00000558080 ETDBQ3ZM63 59 aa4.53□□□□□ -1.68
SPG11-205ENST00000558080 NKAPP1Q8N9T2 125 aa4.53□□□□□ -1.68
SPG11-205ENST00000558080 IGLV5-37A0A075B6J1 123 aa4.52□□□□□ -1.69
SPG11-205ENST00000558080 TRBV10-3A0A0K0K1G6 114 aa4.52□□□□□ -1.69
SPG11-205ENST00000558080 J3QR89 54 aa4.52□□□□□ -1.69
SPG11-205ENST00000558080 KRTAP1-4P0C5Y4 121 aa4.52□□□□□ -1.69
SPG11-205ENST00000558080 MRPL55Q7Z7F7 128 aaKnown RBP4.52□□□□□ -1.69
SPG11-205ENST00000558080 TEN1Q86WV5 123 aa4.52□□□□□ -1.69
SPG11-205ENST00000558080 FAM218AQ96MZ4 157 aa4.52□□□□□ -1.69
SPG11-205ENST00000558080 IGLV1-50A0A075B6I6 118 aa4.51□□□□□ -1.69
SPG11-205ENST00000558080 RPL37AP8A6NKH3 93 aa4.51□□□□□ -1.69
SPG11-205ENST00000558080 ZNF861PO60384 105 aa4.51□□□□□ -1.69
SPG11-205ENST00000558080 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
SPG11-205ENST00000558080 C6orf99Q4VX62 202 aa4.51□□□□□ -1.69
SPG11-205ENST00000558080 PPDPFLQ8WWR9 84 aa4.51□□□□□ -1.69
SPG11-205ENST00000558080 LINC00167Q96N53 147 aa4.51□□□□□ -1.69
SPG11-205ENST00000558080 TRBV7-6A0A0J9YX20 115 aa4.5□□□□□ -1.69
SPG11-205ENST00000558080 ZNF73O43830 326 aaPredicted RBP4.49□□□□□ -1.69
SPG11-205ENST00000558080 BCE1O60756 84 aa4.49□□□□□ -1.69
SPG11-205ENST00000558080 BAALC-AS2P0C853 105 aa4.49□□□□□ -1.69
SPG11-205ENST00000558080 COX7BP24311 80 aa4.49□□□□□ -1.69
SPG11-205ENST00000558080 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
SPG11-205ENST00000558080 hADV29S1A0JD25 119 aa4.48□□□□□ -1.69
SPG11-205ENST00000558080 H3BQ85 93 aa4.48□□□□□ -1.69
SPG11-205ENST00000558080 PRYO14603 147 aa4.48□□□□□ -1.69
SPG11-205ENST00000558080 ELOF1P60002 83 aaKnown RBP4.48□□□□□ -1.69
SPG11-205ENST00000558080 LINC00575Q6W349 94 aa4.48□□□□□ -1.69
SPG11-205ENST00000558080 KCNQ1DNQ9H478 68 aa4.48□□□□□ -1.69
SPG11-205ENST00000558080 ORMDL1Q9P0S3 153 aa4.48□□□□□ -1.69
SPG11-205ENST00000558080 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
SPG11-205ENST00000558080 ANAPC11Q9NYG5 84 aa4.47□□□□□ -1.69
SPG11-205ENST00000558080 UBE2AP49459 152 aa4.46□□□□□ -1.7
SPG11-205ENST00000558080 PRR4Q16378 134 aa4.46□□□□□ -1.7
SPG11-205ENST00000558080 LPAP08519 4548 aa4.45□□□□□ -1.7
SPG11-205ENST00000558080 A0A087X002 238 aa4.45□□□□□ -1.7
SPG11-205ENST00000558080 TEX49A0A1B0GTD5 131 aa4.45□□□□□ -1.7
SPG11-205ENST00000558080 TMEM256-PLSCR3K7ERE1 68 aa4.45□□□□□ -1.7
SPG11-205ENST00000558080 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.45□□□□□ -1.7
SPG11-205ENST00000558080 ETDCA0A1B0GVM5 59 aa4.44□□□□□ -1.7
SPG11-205ENST00000558080 IGKV2-30P06310 120 aa4.44□□□□□ -1.7
SPG11-205ENST00000558080 CRYGAP11844 174 aa4.44□□□□□ -1.7
SPG11-205ENST00000558080 SPRR1AP35321 89 aa4.44□□□□□ -1.7
SPG11-205ENST00000558080 PRLHP81277 87 aa4.44□□□□□ -1.7
SPG11-205ENST00000558080 FAM19A1Q7Z5A9 133 aa4.44□□□□□ -1.7
SPG11-205ENST00000558080 KRTAP13-1Q8IUC0 172 aa4.44□□□□□ -1.7
SPG11-205ENST00000558080 TYMSOSQ8TAI1 123 aa4.44□□□□□ -1.7
SPG11-205ENST00000558080 VPS25Q9BRG1 176 aa4.44□□□□□ -1.7
SPG11-205ENST00000558080 JMJD7-PLA2G4BH0Y9G9 81 aa4.43□□□□□ -1.7
SPG11-205ENST00000558080 DHRS4-AS1Q9P1J3 65 aa4.43□□□□□ -1.7
SPG11-205ENST00000558080 KRTAP4-16G5E9R7 235 aaPredicted RBP4.42□□□□□ -1.7
SPG11-205ENST00000558080 KRTAP13-2Q52LG2 175 aa4.42□□□□□ -1.7
SPG11-205ENST00000558080 Q6ZQY7 126 aa4.42□□□□□ -1.7
SPG11-205ENST00000558080 OBSCN-AS1Q96MR7 158 aa4.42□□□□□ -1.7
SPG11-205ENST00000558080 FAM240AA0A1B0GVK7 77 aa4.41□□□□□ -1.7
SPG11-205ENST00000558080 ACYP1P07311 99 aa4.41□□□□□ -1.7
SPG11-205ENST00000558080 C21orf62-AS1Q17RA5 79 aa4.41□□□□□ -1.7
SPG11-205ENST00000558080 Q6ZRX8 168 aa4.41□□□□□ -1.7
SPG11-205ENST00000558080 FAM229BQ4G0N7 80 aa4.4□□□□□ -1.71
SPG11-205ENST00000558080 HIGD2AQ9BW72 106 aa4.39□□□□□ -1.71
SPG11-205ENST00000558080 LAMTOR3Q9UHA4 124 aa4.39□□□□□ -1.71
SPG11-205ENST00000558080 RBM3P98179 157 aaKnown RBP4.38□□□□□ -1.71
SPG11-205ENST00000558080 GAGE2AQ6NT46 116 aa4.38□□□□□ -1.71
SPG11-205ENST00000558080 C3orf22Q8N5N4 141 aa4.38□□□□□ -1.71
SPG11-205ENST00000558080 LINC00304Q8N9R0 145 aa4.38□□□□□ -1.71
SPG11-205ENST00000558080 RETNLBQ9BQ08 111 aa4.38□□□□□ -1.71
SPG11-205ENST00000558080 Q9BRP9 147 aa4.38□□□□□ -1.71
SPG11-205ENST00000558080 C14orf132Q9NPU4 83 aa4.38□□□□□ -1.71
SPG11-205ENST00000558080 PDE6GP18545 87 aa4.37□□□□□ -1.71
SPG11-205ENST00000558080 SIGMAR1Q99720 223 aa4.37□□□□□ -1.71
SPG11-205ENST00000558080 IGLV5-48A0A075B6I7 105 aa4.36□□□□□ -1.71
SPG11-205ENST00000558080 LOC110117498A0A087WWA1 95 aa4.36□□□□□ -1.71
SPG11-205ENST00000558080 A0A1B0GV72 72 aa4.36□□□□□ -1.71
SPG11-205ENST00000558080 CCKP06307 115 aa4.36□□□□□ -1.71
SPG11-205ENST00000558080 NDUFV3P56181 108 aaKnown RBP4.36□□□□□ -1.71
SPG11-205ENST00000558080 SMCR5Q8TEV8 140 aa4.36□□□□□ -1.71
SPG11-205ENST00000558080 SPRR4Q96PI1 79 aa4.36□□□□□ -1.71
SPG11-205ENST00000558080 DSCR8Q96T75 97 aa4.36□□□□□ -1.71
SPG11-205ENST00000558080 Q8N377 158 aa4.35□□□□□ -1.71
SPG11-205ENST00000558080 DEFB105AQ8NG35 78 aa4.35□□□□□ -1.71
SPG11-205ENST00000558080 ERC2-IT1O76042 136 aa4.34□□□□□ -1.71
SPG11-205ENST00000558080 LINC01547P58512 204 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms