RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 F8WEM9 126 aa9.13□□□□□ -0.95
NEDD4-212ENST00000557845 C1orf195Q5TG92 126 aa9.13□□□□□ -0.95
NEDD4-212ENST00000557845 PAM16Q9Y3D7 125 aa9.13□□□□□ -0.95
NEDD4-212ENST00000557845 SPATA45Q537H7 98 aa9.12□□□□□ -0.95
NEDD4-212ENST00000557845 HIGD1BQ9P298 99 aa9.12□□□□□ -0.95
NEDD4-212ENST00000557845 CFC1BP0CG36 223 aa9.11□□□□□ -0.95
NEDD4-212ENST00000557845 CFC1P0CG37 223 aa9.11□□□□□ -0.95
NEDD4-212ENST00000557845 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.11□□□□□ -0.95
NEDD4-212ENST00000557845 IGLV8-61A0A075B6I0 122 aa9.09□□□□□ -0.95
NEDD4-212ENST00000557845 TCL1BO95988 128 aa9.09□□□□□ -0.95
NEDD4-212ENST00000557845 VAMP8Q9BV40 100 aa9.09□□□□□ -0.95
NEDD4-212ENST00000557845 OCIAD2Q56VL3 154 aa9.08□□□□□ -0.96
NEDD4-212ENST00000557845 Q6JHZ5 121 aa9.08□□□□□ -0.96
NEDD4-212ENST00000557845 RAB37Q96AX2 223 aa9.08□□□□□ -0.96
NEDD4-212ENST00000557845 C2orf91Q6ZV80 131 aa9.07□□□□□ -0.96
NEDD4-212ENST00000557845 PPDPFLQ8WWR9 84 aa9.07□□□□□ -0.96
NEDD4-212ENST00000557845 IGFL1Q6UW32 110 aa9.06□□□□□ -0.96
NEDD4-212ENST00000557845 A0A0B4J2C4 111 aa9.05□□□□□ -0.96
NEDD4-212ENST00000557845 PCOTHQ58A44 107 aa9.05□□□□□ -0.96
NEDD4-212ENST00000557845 CLEC2BQ92478 149 aa9.05□□□□□ -0.96
NEDD4-212ENST00000557845 SNHG12Q9BXW3 62 aa9.05□□□□□ -0.96
NEDD4-212ENST00000557845 KRTAP3-3Q9BYR6 98 aa9.04□□□□□ -0.96
NEDD4-212ENST00000557845 KRTAP3-2Q9BYR7 98 aa9.04□□□□□ -0.96
NEDD4-212ENST00000557845 TRBV7-7A0A0K0K1E9 115 aa9.03□□□□□ -0.96
NEDD4-212ENST00000557845 H0YGX0 51 aa9.03□□□□□ -0.96
NEDD4-212ENST00000557845 CEND1Q8N111 149 aa9.03□□□□□ -0.96
NEDD4-212ENST00000557845 SNCGO76070 127 aa9.01□□□□□ -0.97
NEDD4-212ENST00000557845 FAM218AQ96MZ4 157 aa9□□□□□ -0.97
NEDD4-212ENST00000557845 PRO1854Q9UHT4 67 aa8.99□□□□□ -0.97
NEDD4-212ENST00000557845 TMEM238LA0A1B0GVL6 79 aa8.98□□□□□ -0.97
NEDD4-212ENST00000557845 A6NJY4 79 aa8.98□□□□□ -0.97
NEDD4-212ENST00000557845 H3BUT2 72 aa8.98□□□□□ -0.97
NEDD4-212ENST00000557845 KRTAP9-2Q9BYQ4 174 aa8.98□□□□□ -0.97
NEDD4-212ENST00000557845 FXYD2P54710 66 aa8.96□□□□□ -0.98
NEDD4-212ENST00000557845 RPL37P61927 97 aaKnown RBP8.96□□□□□ -0.98
NEDD4-212ENST00000557845 PYY3Q5JQD4 70 aa8.96□□□□□ -0.98
NEDD4-212ENST00000557845 NDUFV3P56181 108 aaKnown RBP8.95□□□□□ -0.98
NEDD4-212ENST00000557845 A0A1B0GX51 115 aa8.94□□□□□ -0.98
NEDD4-212ENST00000557845 LCE2CQ5TA81 110 aa8.94□□□□□ -0.98
NEDD4-212ENST00000557845 GHRHP01286 108 aa8.92□□□□□ -0.98
NEDD4-212ENST00000557845 KRTAP19-2Q3LHN2 52 aa8.92□□□□□ -0.98
NEDD4-212ENST00000557845 Q6Q795 121 aa8.92□□□□□ -0.98
NEDD4-212ENST00000557845 LST1O00453 97 aa8.91□□□□□ -0.98
NEDD4-212ENST00000557845 TRIAP1O43715 76 aa8.91□□□□□ -0.98
NEDD4-212ENST00000557845 HSD52Q0P140 79 aa8.9□□□□□ -0.98
NEDD4-212ENST00000557845 TEN1Q86WV5 123 aa8.9□□□□□ -0.98
NEDD4-212ENST00000557845 H3BMG7 143 aa8.89□□□□□ -0.99
NEDD4-212ENST00000557845 FABP2P12104 132 aa8.89□□□□□ -0.99
NEDD4-212ENST00000557845 SS18L2Q9UHA2 77 aa8.87□□□□□ -0.99
NEDD4-212ENST00000557845 OBSCN-AS1Q96MR7 158 aa8.86□□□□□ -0.99
NEDD4-212ENST00000557845 TMA7Q9Y2S6 64 aaKnown RBP8.86□□□□□ -0.99
NEDD4-212ENST00000557845 PSMB2P49721 201 aa8.85□□□□□ -0.99
NEDD4-212ENST00000557845 K7ERJ3 54 aa8.84□□□□□ -0.99
NEDD4-212ENST00000557845 UQCR10Q9UDW1 63 aa8.84□□□□□ -0.99
NEDD4-212ENST00000557845 A0A087WSZ3 146 aa8.83□□□□□ -1
NEDD4-212ENST00000557845 DNAL4O96015 105 aa8.82□□□□□ -1
NEDD4-212ENST00000557845 COX6CP09669 75 aa8.82□□□□□ -1
NEDD4-212ENST00000557845 MT1HP80294 61 aa8.82□□□□□ -1
NEDD4-212ENST00000557845 ORMDL1Q9P0S3 153 aa8.82□□□□□ -1
NEDD4-212ENST00000557845 Q75L30 129 aa8.81□□□□□ -1
NEDD4-212ENST00000557845 A0A1W2PNM2 257 aa8.8□□□□□ -1
NEDD4-212ENST00000557845 H3BQ85 93 aa8.8□□□□□ -1
NEDD4-212ENST00000557845 ATP11AUNQ6ZP68 121 aa8.8□□□□□ -1
NEDD4-212ENST00000557845 Q96NJ1 140 aa8.8□□□□□ -1
NEDD4-212ENST00000557845 TMEM256-PLSCR3K7ERE1 68 aa8.78□□□□□ -1
NEDD4-212ENST00000557845 ANKRD29Q8N6D5 301 aa8.78□□□□□ -1
NEDD4-212ENST00000557845 TRBV7-4A0A0J9YYF1 115 aa8.74□□□□□ -1.01
NEDD4-212ENST00000557845 A0A1B0GV72 72 aa8.74□□□□□ -1.01
NEDD4-212ENST00000557845 C20orf166-AS1Q96NR2 134 aa8.73□□□□□ -1.01
NEDD4-212ENST00000557845 SCGB1C2P0DMR2 95 aa8.72□□□□□ -1.01
NEDD4-212ENST00000557845 UBE2V1Q13404 147 aa8.72□□□□□ -1.01
NEDD4-212ENST00000557845 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
NEDD4-212ENST00000557845 TRACP01848 142 aa8.71□□□□□ -1.02
NEDD4-212ENST00000557845 A8MUU9 505 aa8.7□□□□□ -1.02
NEDD4-212ENST00000557845 CCKP06307 115 aa8.69□□□□□ -1.02
NEDD4-212ENST00000557845 DSCR10P59022 87 aa8.69□□□□□ -1.02
NEDD4-212ENST00000557845 IGKV4-1P06312 121 aa8.68□□□□□ -1.02
NEDD4-212ENST00000557845 SIGMAR1Q99720 223 aa8.68□□□□□ -1.02
NEDD4-212ENST00000557845 KRTAP9-6A0A140TA67 174 aa8.67□□□□□ -1.02
NEDD4-212ENST00000557845 M0R2T5 61 aa8.66□□□□□ -1.02
NEDD4-212ENST00000557845 LINC00313P59037 77 aa8.66□□□□□ -1.02
NEDD4-212ENST00000557845 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
NEDD4-212ENST00000557845 KRTAP10-6P60371 365 aaPredicted RBP8.65□□□□□ -1.02
NEDD4-212ENST00000557845 LINC00472Q9H8W2 130 aa8.65□□□□□ -1.02
NEDD4-212ENST00000557845 RBM3P98179 157 aaKnown RBP8.64□□□□□ -1.03
NEDD4-212ENST00000557845 DEFB116Q30KQ4 102 aa8.64□□□□□ -1.03
NEDD4-212ENST00000557845 BAALC-AS2P0C853 105 aa8.63□□□□□ -1.03
NEDD4-212ENST00000557845 FLGP20930 4061 aaPredicted RBP8.63□□□□□ -1.03
NEDD4-212ENST00000557845 DSCR8Q96T75 97 aa8.62□□□□□ -1.03
NEDD4-212ENST00000557845 VPS25Q9BRG1 176 aa8.61□□□□□ -1.03
NEDD4-212ENST00000557845 KRTAP16-1A8MUX0 517 aa8.6□□□□□ -1.03
NEDD4-212ENST00000557845 M0R143 59 aa8.6□□□□□ -1.03
NEDD4-212ENST00000557845 NOTCH2NLQ7Z3S9 236 aa8.6□□□□□ -1.03
NEDD4-212ENST00000557845 C9JAW5 83 aa8.57□□□□□ -1.04
NEDD4-212ENST00000557845 IGHV6-1A0A0B4J1U7 121 aa8.56□□□□□ -1.04
NEDD4-212ENST00000557845 NAA38Q9BRA0 125 aaKnown RBP8.56□□□□□ -1.04
NEDD4-212ENST00000557845 TRBV20-1A0A075B6N2 111 aa8.55□□□□□ -1.04
NEDD4-212ENST00000557845 ATXN8Q156A1 80 aa8.55□□□□□ -1.04
NEDD4-212ENST00000557845 SMIM6P0DI80 62 aa8.54□□□□□ -1.04
NEDD4-212ENST00000557845 C21orf62-AS1Q17RA5 79 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms