RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 HIST1H2BLQ99880 126 aa7.86□□□□□ -1.15
SHMT2-235ENST00000557740 RPL37P61927 97 aaKnown RBP7.85□□□□□ -1.15
SHMT2-235ENST00000557740 LINC00575Q6W349 94 aa7.85□□□□□ -1.15
SHMT2-235ENST00000557740 CFC1BP0CG36 223 aa7.84□□□□□ -1.15
SHMT2-235ENST00000557740 Q6ZQY7 126 aa7.84□□□□□ -1.15
SHMT2-235ENST00000557740 hADV29S1A0JD25 119 aa7.83□□□□□ -1.16
SHMT2-235ENST00000557740 Q6JHZ5 121 aa7.83□□□□□ -1.16
SHMT2-235ENST00000557740 CLEC2BQ92478 149 aa7.82□□□□□ -1.16
SHMT2-235ENST00000557740 COX6B2Q6YFQ2 88 aa7.8□□□□□ -1.16
SHMT2-235ENST00000557740 TRBV7-7A0A0K0K1E9 115 aa7.79□□□□□ -1.16
SHMT2-235ENST00000557740 IGFL1Q6UW32 110 aa7.78□□□□□ -1.16
SHMT2-235ENST00000557740 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.78□□□□□ -1.16
SHMT2-235ENST00000557740 C12orf57Q99622 126 aa7.78□□□□□ -1.16
SHMT2-235ENST00000557740 OCIAD2Q56VL3 154 aa7.77□□□□□ -1.17
SHMT2-235ENST00000557740 BVES-AS1Q5T3Y7 98 aa7.77□□□□□ -1.17
SHMT2-235ENST00000557740 HIST1H4GQ99525 98 aa7.77□□□□□ -1.17
SHMT2-235ENST00000557740 LOC105371267A0A1B0GV96 52 aa7.76□□□□□ -1.17
SHMT2-235ENST00000557740 M0R2T5 61 aa7.76□□□□□ -1.17
SHMT2-235ENST00000557740 PPDPFLQ8WWR9 84 aa7.76□□□□□ -1.17
SHMT2-235ENST00000557740 SNHG12Q9BXW3 62 aa7.75□□□□□ -1.17
SHMT2-235ENST00000557740 CRCT1Q9UGL9 99 aa7.75□□□□□ -1.17
SHMT2-235ENST00000557740 SCGB1D1O95968 90 aa7.73□□□□□ -1.17
SHMT2-235ENST00000557740 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
SHMT2-235ENST00000557740 OBSCN-AS1Q96MR7 158 aa7.73□□□□□ -1.17
SHMT2-235ENST00000557740 H3BUT2 72 aa7.72□□□□□ -1.17
SHMT2-235ENST00000557740 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
SHMT2-235ENST00000557740 LST1O00453 97 aa7.7□□□□□ -1.18
SHMT2-235ENST00000557740 COX8AP10176 69 aa7.7□□□□□ -1.18
SHMT2-235ENST00000557740 PYY3Q5JQD4 70 aa7.7□□□□□ -1.18
SHMT2-235ENST00000557740 ATP11AUNQ6ZP68 121 aa7.7□□□□□ -1.18
SHMT2-235ENST00000557740 SNCGO76070 127 aa7.69□□□□□ -1.18
SHMT2-235ENST00000557740 Q75L30 129 aa7.69□□□□□ -1.18
SHMT2-235ENST00000557740 RAB37Q96AX2 223 aa7.68□□□□□ -1.18
SHMT2-235ENST00000557740 SS18L2Q9UHA2 77 aa7.68□□□□□ -1.18
SHMT2-235ENST00000557740 FSIP2Q5CZC0 6907 aa7.68□□□□□ -1.18
SHMT2-235ENST00000557740 DLEU1O43261 78 aa7.66□□□□□ -1.18
SHMT2-235ENST00000557740 CFC1P0CG37 223 aa7.65□□□□□ -1.18
SHMT2-235ENST00000557740 SMIM6P0DI80 62 aa7.65□□□□□ -1.18
SHMT2-235ENST00000557740 Q6Q795 121 aa7.65□□□□□ -1.18
SHMT2-235ENST00000557740 H0YGX0 51 aa7.64□□□□□ -1.19
SHMT2-235ENST00000557740 Q96NJ1 140 aa7.64□□□□□ -1.19
SHMT2-235ENST00000557740 A0A0B4J2C4 111 aa7.63□□□□□ -1.19
SHMT2-235ENST00000557740 TEN1Q86WV5 123 aa7.63□□□□□ -1.19
SHMT2-235ENST00000557740 C14orf144Q96I85 54 aa7.63□□□□□ -1.19
SHMT2-235ENST00000557740 VAMP8Q9BV40 100 aa7.63□□□□□ -1.19
SHMT2-235ENST00000557740 NDUFV3P56181 108 aaKnown RBP7.62□□□□□ -1.19
SHMT2-235ENST00000557740 FAM218AQ96MZ4 157 aa7.61□□□□□ -1.19
SHMT2-235ENST00000557740 HIGD1BQ9P298 99 aa7.61□□□□□ -1.19
SHMT2-235ENST00000557740 PAM16Q9Y3D7 125 aa7.61□□□□□ -1.19
SHMT2-235ENST00000557740 FLGP20930 4061 aaPredicted RBP7.6□□□□□ -1.19
SHMT2-235ENST00000557740 A0A087WSZ3 146 aa7.6□□□□□ -1.19
SHMT2-235ENST00000557740 SPATA45Q537H7 98 aa7.6□□□□□ -1.19
SHMT2-235ENST00000557740 GHRHP01286 108 aa7.59□□□□□ -1.19
SHMT2-235ENST00000557740 H3BMG7 143 aa7.58□□□□□ -1.2
SHMT2-235ENST00000557740 FABP2P12104 132 aa7.58□□□□□ -1.2
SHMT2-235ENST00000557740 TMEM238LA0A1B0GVL6 79 aa7.57□□□□□ -1.2
SHMT2-235ENST00000557740 A6NJY4 79 aa7.57□□□□□ -1.2
SHMT2-235ENST00000557740 C2orf91Q6ZV80 131 aa7.57□□□□□ -1.2
SHMT2-235ENST00000557740 C20orf166-AS1Q96NR2 134 aa7.57□□□□□ -1.2
SHMT2-235ENST00000557740 A0A1B0GX51 115 aa7.56□□□□□ -1.2
SHMT2-235ENST00000557740 A8MUU9 505 aa7.55□□□□□ -1.2
SHMT2-235ENST00000557740 CEND1Q8N111 149 aa7.55□□□□□ -1.2
SHMT2-235ENST00000557740 SIGMAR1Q99720 223 aa7.55□□□□□ -1.2
SHMT2-235ENST00000557740 PRO1854Q9UHT4 67 aa7.55□□□□□ -1.2
SHMT2-235ENST00000557740 TRBV20-1A0A075B6N2 111 aa7.52□□□□□ -1.21
SHMT2-235ENST00000557740 DSCR10P59022 87 aa7.52□□□□□ -1.21
SHMT2-235ENST00000557740 TRIAP1O43715 76 aa7.51□□□□□ -1.21
SHMT2-235ENST00000557740 FXYD2P54710 66 aa7.51□□□□□ -1.21
SHMT2-235ENST00000557740 A0A1W2PNM2 257 aa7.5□□□□□ -1.21
SHMT2-235ENST00000557740 DNAL4O96015 105 aa7.5□□□□□ -1.21
SHMT2-235ENST00000557740 A0A1B0GV72 72 aa7.48□□□□□ -1.21
SHMT2-235ENST00000557740 TSTD3H0UI37 97 aa7.48□□□□□ -1.21
SHMT2-235ENST00000557740 ANKRD29Q8N6D5 301 aa7.48□□□□□ -1.21
SHMT2-235ENST00000557740 ORMDL1Q9P0S3 153 aa7.48□□□□□ -1.21
SHMT2-235ENST00000557740 UQCR10Q9UDW1 63 aa7.48□□□□□ -1.21
SHMT2-235ENST00000557740 IGKV4-1P06312 121 aa7.47□□□□□ -1.21
SHMT2-235ENST00000557740 TRBV7-4A0A0J9YYF1 115 aa7.46□□□□□ -1.22
SHMT2-235ENST00000557740 H3BQ85 93 aa7.46□□□□□ -1.22
SHMT2-235ENST00000557740 PSMB2P49721 201 aa7.46□□□□□ -1.22
SHMT2-235ENST00000557740 LINC00313P59037 77 aa7.46□□□□□ -1.22
SHMT2-235ENST00000557740 HSD52Q0P140 79 aa7.44□□□□□ -1.22
SHMT2-235ENST00000557740 FAM236DA0A1B0GTK5 79 aa7.43□□□□□ -1.22
SHMT2-235ENST00000557740 K7ERJ3 54 aa7.43□□□□□ -1.22
SHMT2-235ENST00000557740 COX6CP09669 75 aa7.43□□□□□ -1.22
SHMT2-235ENST00000557740 FAM236CP0DP71 79 aa7.43□□□□□ -1.22
SHMT2-235ENST00000557740 TMEM256-PLSCR3K7ERE1 68 aa7.42□□□□□ -1.22
SHMT2-235ENST00000557740 TRACP01848 142 aa7.42□□□□□ -1.22
SHMT2-235ENST00000557740 KRTAP16-1A8MUX0 517 aa7.41□□□□□ -1.22
SHMT2-235ENST00000557740 CCKP06307 115 aa7.41□□□□□ -1.22
SHMT2-235ENST00000557740 DEFB116Q30KQ4 102 aa7.4□□□□□ -1.22
SHMT2-235ENST00000557740 IGHV6-1A0A0B4J1U7 121 aa7.39□□□□□ -1.23
SHMT2-235ENST00000557740 PCP4L1A6NKN8 68 aa7.38□□□□□ -1.23
SHMT2-235ENST00000557740 KRTAP9-8Q9BYQ0 159 aa7.38□□□□□ -1.23
SHMT2-235ENST00000557740 LINC00472Q9H8W2 130 aa7.38□□□□□ -1.23
SHMT2-235ENST00000557740 NOTCH2NLQ7Z3S9 236 aa7.37□□□□□ -1.23
SHMT2-235ENST00000557740 RBM12B-AS1Q9P1G2 102 aa7.37□□□□□ -1.23
SHMT2-235ENST00000557740 UBE2V1Q13404 147 aa7.36□□□□□ -1.23
SHMT2-235ENST00000557740 VPS25Q9BRG1 176 aa7.36□□□□□ -1.23
SHMT2-235ENST00000557740 HRES1P13985 223 aa7.33□□□□□ -1.24
SHMT2-235ENST00000557740 C8orf87E5RJ46 101 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms