RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 C1orf195Q5TG92 126 aa7.48□□□□□ -1.21
SLIRP-210ENST00000557431 SLC25A34Q6PIV7 304 aa7.48□□□□□ -1.21
SLIRP-210ENST00000557431 SMIM11BQ8TCY0 68 aa7.47□□□□□ -1.21
SLIRP-210ENST00000557431 SPATA45Q537H7 98 aa7.46□□□□□ -1.22
SLIRP-210ENST00000557431 C14orf144Q96I85 54 aa7.46□□□□□ -1.22
SLIRP-210ENST00000557431 HIST1H4GQ99525 98 aa7.46□□□□□ -1.22
SLIRP-210ENST00000557431 PRO1933Q9H354 126 aa7.46□□□□□ -1.22
SLIRP-210ENST00000557431 PAM16Q9Y3D7 125 aa7.46□□□□□ -1.22
SLIRP-210ENST00000557431 SMIM29Q86T20 159 aa7.45□□□□□ -1.22
SLIRP-210ENST00000557431 VAMP8Q9BV40 100 aa7.45□□□□□ -1.22
SLIRP-210ENST00000557431 CD164Q04900 197 aa7.44□□□□□ -1.22
SLIRP-210ENST00000557431 HIGD1BQ9P298 99 aa7.43□□□□□ -1.22
SLIRP-210ENST00000557431 TEX49A0A1B0GTD5 131 aa7.42□□□□□ -1.22
SLIRP-210ENST00000557431 VAMP3Q15836 100 aa7.4□□□□□ -1.22
SLIRP-210ENST00000557431 C2orf91Q6ZV80 131 aa7.4□□□□□ -1.22
SLIRP-210ENST00000557431 C12orf57Q99622 126 aa7.4□□□□□ -1.22
SLIRP-210ENST00000557431 NHP2Q9NX24 153 aaKnown RBP7.4□□□□□ -1.22
SLIRP-210ENST00000557431 IGLV5-48A0A075B6I7 105 aa7.39□□□□□ -1.23
SLIRP-210ENST00000557431 PYY3Q5JQD4 70 aa7.39□□□□□ -1.23
SLIRP-210ENST00000557431 Q5XG85 94 aa7.39□□□□□ -1.23
SLIRP-210ENST00000557431 Q6Q795 121 aa7.39□□□□□ -1.23
SLIRP-210ENST00000557431 TMA7Q9Y2S6 64 aaKnown RBP7.39□□□□□ -1.23
SLIRP-210ENST00000557431 CFC1P0CG37 223 aa7.37□□□□□ -1.23
SLIRP-210ENST00000557431 LINC00575Q6W349 94 aa7.37□□□□□ -1.23
SLIRP-210ENST00000557431 hADV29S1A0JD25 119 aa7.34□□□□□ -1.23
SLIRP-210ENST00000557431 KRTAP9-7A8MTY7 169 aa7.34□□□□□ -1.23
SLIRP-210ENST00000557431 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.34□□□□□ -1.23
SLIRP-210ENST00000557431 BVES-AS1Q5T3Y7 98 aa7.34□□□□□ -1.23
SLIRP-210ENST00000557431 CEND1Q8N111 149 aa7.34□□□□□ -1.23
SLIRP-210ENST00000557431 RAB37Q96AX2 223 aa7.34□□□□□ -1.23
SLIRP-210ENST00000557431 A0A0B4J2C4 111 aa7.33□□□□□ -1.24
SLIRP-210ENST00000557431 LCE2BO14633 110 aa7.33□□□□□ -1.24
SLIRP-210ENST00000557431 Q6ZQY7 126 aa7.32□□□□□ -1.24
SLIRP-210ENST00000557431 TMEM238LA0A1B0GVL6 79 aa7.3□□□□□ -1.24
SLIRP-210ENST00000557431 A6NJY4 79 aa7.3□□□□□ -1.24
SLIRP-210ENST00000557431 TCL1BO95988 128 aa7.3□□□□□ -1.24
SLIRP-210ENST00000557431 FXYD2P54710 66 aa7.3□□□□□ -1.24
SLIRP-210ENST00000557431 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.29□□□□□ -1.24
SLIRP-210ENST00000557431 OBSCN-AS1Q96MR7 158 aa7.29□□□□□ -1.24
SLIRP-210ENST00000557431 H0YGX0 51 aa7.28□□□□□ -1.24
SLIRP-210ENST00000557431 PRO1854Q9UHT4 67 aa7.28□□□□□ -1.24
SLIRP-210ENST00000557431 HSD52Q0P140 79 aa7.27□□□□□ -1.25
SLIRP-210ENST00000557431 F8WEM9 126 aa7.26□□□□□ -1.25
SLIRP-210ENST00000557431 PPDPFLQ8WWR9 84 aa7.26□□□□□ -1.25
SLIRP-210ENST00000557431 KRTAP9-8Q9BYQ0 159 aa7.26□□□□□ -1.25
SLIRP-210ENST00000557431 UQCR10Q9UDW1 63 aa7.26□□□□□ -1.25
SLIRP-210ENST00000557431 SSPOA2VEC9 5147 aa7.24□□□□□ -1.25
SLIRP-210ENST00000557431 SNCGO76070 127 aa7.24□□□□□ -1.25
SLIRP-210ENST00000557431 IGFL1Q6UW32 110 aa7.24□□□□□ -1.25
SLIRP-210ENST00000557431 ATP11AUNQ6ZP68 121 aa7.24□□□□□ -1.25
SLIRP-210ENST00000557431 FAM218AQ96MZ4 157 aa7.24□□□□□ -1.25
SLIRP-210ENST00000557431 USH2AO75445 5202 aa7.23□□□□□ -1.25
SLIRP-210ENST00000557431 TRBV7-7A0A0K0K1E9 115 aa7.23□□□□□ -1.25
SLIRP-210ENST00000557431 OCIAD2Q56VL3 154 aa7.23□□□□□ -1.25
SLIRP-210ENST00000557431 Q6JHZ5 121 aa7.23□□□□□ -1.25
SLIRP-210ENST00000557431 Q75L30 129 aa7.23□□□□□ -1.25
SLIRP-210ENST00000557431 SNHG12Q9BXW3 62 aa7.23□□□□□ -1.25
SLIRP-210ENST00000557431 A0A1B0GX51 115 aa7.21□□□□□ -1.26
SLIRP-210ENST00000557431 TRIAP1O43715 76 aa7.21□□□□□ -1.26
SLIRP-210ENST00000557431 K7ERJ3 54 aa7.2□□□□□ -1.26
SLIRP-210ENST00000557431 CLEC2BQ92478 149 aa7.2□□□□□ -1.26
SLIRP-210ENST00000557431 Q96NJ1 140 aa7.2□□□□□ -1.26
SLIRP-210ENST00000557431 H3BUT2 72 aa7.17□□□□□ -1.26
SLIRP-210ENST00000557431 GHRHP01286 108 aa7.16□□□□□ -1.26
SLIRP-210ENST00000557431 PSMB2P49721 201 aa7.16□□□□□ -1.26
SLIRP-210ENST00000557431 NDUFV3P56181 108 aaKnown RBP7.16□□□□□ -1.26
SLIRP-210ENST00000557431 MT2AP02795 61 aa7.14□□□□□ -1.27
SLIRP-210ENST00000557431 COX6CP09669 75 aa7.14□□□□□ -1.27
SLIRP-210ENST00000557431 LST1O00453 97 aa7.13□□□□□ -1.27
SLIRP-210ENST00000557431 SMIM6P0DI80 62 aa7.13□□□□□ -1.27
SLIRP-210ENST00000557431 FABP2P12104 132 aa7.13□□□□□ -1.27
SLIRP-210ENST00000557431 LOC105371267A0A1B0GV96 52 aa7.12□□□□□ -1.27
SLIRP-210ENST00000557431 KRTAP19-1Q8IUB9 90 aa7.12□□□□□ -1.27
SLIRP-210ENST00000557431 A8MUU9 505 aa7.11□□□□□ -1.27
SLIRP-210ENST00000557431 H3BMG7 143 aa7.11□□□□□ -1.27
SLIRP-210ENST00000557431 DNAL4O96015 105 aa7.11□□□□□ -1.27
SLIRP-210ENST00000557431 C20orf166-AS1Q96NR2 134 aa7.11□□□□□ -1.27
SLIRP-210ENST00000557431 FCGBPQ9Y6R7 5405 aaPredicted RBP7.11□□□□□ -1.27
SLIRP-210ENST00000557431 MT1FP04733 61 aa7.1□□□□□ -1.27
SLIRP-210ENST00000557431 ORMDL1Q9P0S3 153 aa7.1□□□□□ -1.27
SLIRP-210ENST00000557431 KRTAP16-1A8MUX0 517 aa7.09□□□□□ -1.27
SLIRP-210ENST00000557431 H3BQ85 93 aa7.09□□□□□ -1.27
SLIRP-210ENST00000557431 DSCR10P59022 87 aa7.09□□□□□ -1.27
SLIRP-210ENST00000557431 TEN1Q86WV5 123 aa7.09□□□□□ -1.27
SLIRP-210ENST00000557431 TRBV20-1A0A075B6N2 111 aa7.08□□□□□ -1.28
SLIRP-210ENST00000557431 M0R143 59 aa7.08□□□□□ -1.28
SLIRP-210ENST00000557431 TMEM256-PLSCR3K7ERE1 68 aa7.07□□□□□ -1.28
SLIRP-210ENST00000557431 SCGB1C2P0DMR2 95 aa7.07□□□□□ -1.28
SLIRP-210ENST00000557431 FAM236DA0A1B0GTK5 79 aa7.06□□□□□ -1.28
SLIRP-210ENST00000557431 TRACP01848 142 aa7.06□□□□□ -1.28
SLIRP-210ENST00000557431 FAM236CP0DP71 79 aa7.06□□□□□ -1.28
SLIRP-210ENST00000557431 SS18L2Q9UHA2 77 aa7.06□□□□□ -1.28
SLIRP-210ENST00000557431 A0A087WSZ3 146 aa7.04□□□□□ -1.28
SLIRP-210ENST00000557431 A0A1W2PNM2 257 aa7.04□□□□□ -1.28
SLIRP-210ENST00000557431 KRTAP9-3Q9BYQ3 159 aa7.04□□□□□ -1.28
SLIRP-210ENST00000557431 UBE2V1Q13404 147 aa7.03□□□□□ -1.28
SLIRP-210ENST00000557431 ANKRD29Q8N6D5 301 aa7.03□□□□□ -1.28
SLIRP-210ENST00000557431 TSTD3H0UI37 97 aa7.02□□□□□ -1.29
SLIRP-210ENST00000557431 A0A1B0GV72 72 aa7.01□□□□□ -1.29
SLIRP-210ENST00000557431 KRTAP10-10P60014 251 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms