RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 RAB37Q96AX2 223 aa9.07□□□□□ -0.96
VSX1-207ENST00000557285 CFC1BP0CG36 223 aa9.06□□□□□ -0.96
VSX1-207ENST00000557285 CFC1P0CG37 223 aa9.06□□□□□ -0.96
VSX1-207ENST00000557285 BVES-AS1Q5T3Y7 98 aa9.06□□□□□ -0.96
VSX1-207ENST00000557285 LCE2AQ5TA79 106 aaPredicted RBP9.05□□□□□ -0.96
VSX1-207ENST00000557285 C1orf195Q5TG92 126 aa9.05□□□□□ -0.96
VSX1-207ENST00000557285 Q5XG85 94 aa9.03□□□□□ -0.96
VSX1-207ENST00000557285 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.03□□□□□ -0.96
VSX1-207ENST00000557285 C2orf91Q6ZV80 131 aa9.03□□□□□ -0.96
VSX1-207ENST00000557285 HIGD1BQ9P298 99 aa9.03□□□□□ -0.96
VSX1-207ENST00000557285 TCL1BO95988 128 aa9.02□□□□□ -0.97
VSX1-207ENST00000557285 PCOTHQ58A44 107 aa9.01□□□□□ -0.97
VSX1-207ENST00000557285 IGFL1Q6UW32 110 aa9.01□□□□□ -0.97
VSX1-207ENST00000557285 SNHG12Q9BXW3 62 aa9.01□□□□□ -0.97
VSX1-207ENST00000557285 OCIAD2Q56VL3 154 aa9□□□□□ -0.97
VSX1-207ENST00000557285 CLEC2BQ92478 149 aa9□□□□□ -0.97
VSX1-207ENST00000557285 A0A0B4J2C4 111 aa8.99□□□□□ -0.97
VSX1-207ENST00000557285 H3BUT2 72 aa8.99□□□□□ -0.97
VSX1-207ENST00000557285 Q6JHZ5 121 aa8.99□□□□□ -0.97
VSX1-207ENST00000557285 CEND1Q8N111 149 aa8.98□□□□□ -0.97
VSX1-207ENST00000557285 IGLV8-61A0A075B6I0 122 aa8.97□□□□□ -0.97
VSX1-207ENST00000557285 TRBV7-7A0A0K0K1E9 115 aa8.96□□□□□ -0.98
VSX1-207ENST00000557285 FAM218AQ96MZ4 157 aa8.96□□□□□ -0.98
VSX1-207ENST00000557285 TMA7Q9Y2S6 64 aaKnown RBP8.96□□□□□ -0.98
VSX1-207ENST00000557285 TMEM238LA0A1B0GVL6 79 aa8.95□□□□□ -0.98
VSX1-207ENST00000557285 A6NJY4 79 aa8.95□□□□□ -0.98
VSX1-207ENST00000557285 SNCGO76070 127 aa8.95□□□□□ -0.98
VSX1-207ENST00000557285 PPDPFLQ8WWR9 84 aa8.95□□□□□ -0.98
VSX1-207ENST00000557285 FXYD2P54710 66 aa8.94□□□□□ -0.98
VSX1-207ENST00000557285 PRO1854Q9UHT4 67 aa8.94□□□□□ -0.98
VSX1-207ENST00000557285 H0YGX0 51 aa8.93□□□□□ -0.98
VSX1-207ENST00000557285 PYY3Q5JQD4 70 aa8.92□□□□□ -0.98
VSX1-207ENST00000557285 TRIAP1O43715 76 aa8.89□□□□□ -0.99
VSX1-207ENST00000557285 FABP2P12104 132 aa8.89□□□□□ -0.99
VSX1-207ENST00000557285 NDUFV3P56181 108 aaKnown RBP8.89□□□□□ -0.99
VSX1-207ENST00000557285 K7ERJ3 54 aa8.88□□□□□ -0.99
VSX1-207ENST00000557285 RPL37P61927 97 aaKnown RBP8.88□□□□□ -0.99
VSX1-207ENST00000557285 KRTAP9-2Q9BYQ4 174 aa8.88□□□□□ -0.99
VSX1-207ENST00000557285 HSD52Q0P140 79 aa8.87□□□□□ -0.99
VSX1-207ENST00000557285 LST1O00453 97 aa8.86□□□□□ -0.99
VSX1-207ENST00000557285 PSMB2P49721 201 aa8.86□□□□□ -0.99
VSX1-207ENST00000557285 H3BMG7 143 aa8.85□□□□□ -0.99
VSX1-207ENST00000557285 OBSCN-AS1Q96MR7 158 aa8.85□□□□□ -0.99
VSX1-207ENST00000557285 KRTAP9-6A0A140TA67 174 aa8.84□□□□□ -0.99
VSX1-207ENST00000557285 A0A1B0GV72 72 aa8.84□□□□□ -0.99
VSX1-207ENST00000557285 A0A1B0GX51 115 aa8.83□□□□□ -1
VSX1-207ENST00000557285 DNAL4O96015 105 aa8.81□□□□□ -1
VSX1-207ENST00000557285 LCE2CQ5TA81 110 aa8.81□□□□□ -1
VSX1-207ENST00000557285 TEN1Q86WV5 123 aa8.81□□□□□ -1
VSX1-207ENST00000557285 UQCR10Q9UDW1 63 aa8.81□□□□□ -1
VSX1-207ENST00000557285 A0A087WSZ3 146 aa8.8□□□□□ -1
VSX1-207ENST00000557285 GHRHP01286 108 aa8.8□□□□□ -1
VSX1-207ENST00000557285 SS18L2Q9UHA2 77 aa8.8□□□□□ -1
VSX1-207ENST00000557285 KRTAP19-2Q3LHN2 52 aa8.79□□□□□ -1
VSX1-207ENST00000557285 Q6Q795 121 aa8.79□□□□□ -1
VSX1-207ENST00000557285 COX6CP09669 75 aa8.77□□□□□ -1.01
VSX1-207ENST00000557285 ORMDL1Q9P0S3 153 aa8.77□□□□□ -1.01
VSX1-207ENST00000557285 Q96NJ1 140 aa8.76□□□□□ -1.01
VSX1-207ENST00000557285 A0A1W2PNM2 257 aa8.74□□□□□ -1.01
VSX1-207ENST00000557285 MT1HP80294 61 aa8.73□□□□□ -1.01
VSX1-207ENST00000557285 ATP11AUNQ6ZP68 121 aa8.73□□□□□ -1.01
VSX1-207ENST00000557285 ANKRD29Q8N6D5 301 aa8.73□□□□□ -1.01
VSX1-207ENST00000557285 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
VSX1-207ENST00000557285 Q75L30 129 aa8.72□□□□□ -1.01
VSX1-207ENST00000557285 SIGMAR1Q99720 223 aa8.72□□□□□ -1.01
VSX1-207ENST00000557285 SCGB1C2P0DMR2 95 aa8.71□□□□□ -1.02
VSX1-207ENST00000557285 TMEM256-PLSCR3K7ERE1 68 aa8.7□□□□□ -1.02
VSX1-207ENST00000557285 H3BQ85 93 aa8.68□□□□□ -1.02
VSX1-207ENST00000557285 DSCR10P59022 87 aa8.68□□□□□ -1.02
VSX1-207ENST00000557285 CCKP06307 115 aa8.66□□□□□ -1.02
VSX1-207ENST00000557285 VPS25Q9BRG1 176 aa8.66□□□□□ -1.02
VSX1-207ENST00000557285 TRBV7-4A0A0J9YYF1 115 aa8.65□□□□□ -1.02
VSX1-207ENST00000557285 M0R2T5 61 aa8.65□□□□□ -1.02
VSX1-207ENST00000557285 IGKV4-1P06312 121 aa8.65□□□□□ -1.02
VSX1-207ENST00000557285 DEFB116Q30KQ4 102 aa8.65□□□□□ -1.02
VSX1-207ENST00000557285 TRACP01848 142 aa8.64□□□□□ -1.03
VSX1-207ENST00000557285 UBE2V1Q13404 147 aa8.63□□□□□ -1.03
VSX1-207ENST00000557285 C20orf166-AS1Q96NR2 134 aa8.63□□□□□ -1.03
VSX1-207ENST00000557285 NAA38Q9BRA0 125 aaKnown RBP8.62□□□□□ -1.03
VSX1-207ENST00000557285 A8MUU9 505 aa8.6□□□□□ -1.03
VSX1-207ENST00000557285 RBM3P98179 157 aaKnown RBP8.59□□□□□ -1.03
VSX1-207ENST00000557285 FLGP20930 4061 aaPredicted RBP8.59□□□□□ -1.04
VSX1-207ENST00000557285 M0R143 59 aa8.58□□□□□ -1.04
VSX1-207ENST00000557285 BAALC-AS2P0C853 105 aa8.58□□□□□ -1.04
VSX1-207ENST00000557285 LINC00313P59037 77 aa8.58□□□□□ -1.04
VSX1-207ENST00000557285 DSCR8Q96T75 97 aa8.58□□□□□ -1.04
VSX1-207ENST00000557285 IGHV6-1A0A0B4J1U7 121 aa8.56□□□□□ -1.04
VSX1-207ENST00000557285 KRTAP10-6P60371 365 aaPredicted RBP8.56□□□□□ -1.04
VSX1-207ENST00000557285 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
VSX1-207ENST00000557285 NOTCH2NLQ7Z3S9 236 aa8.56□□□□□ -1.04
VSX1-207ENST00000557285 LINC00472Q9H8W2 130 aa8.56□□□□□ -1.04
VSX1-207ENST00000557285 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
VSX1-207ENST00000557285 KRTAP16-1A8MUX0 517 aa8.52□□□□□ -1.05
VSX1-207ENST00000557285 C9JAW5 83 aa8.52□□□□□ -1.05
VSX1-207ENST00000557285 SMIM6P0DI80 62 aa8.52□□□□□ -1.05
VSX1-207ENST00000557285 ATXN8Q156A1 80 aa8.52□□□□□ -1.05
VSX1-207ENST00000557285 BATFQ16520 125 aa8.5□□□□□ -1.05
VSX1-207ENST00000557285 TRBV20-1A0A075B6N2 111 aa8.49□□□□□ -1.05
VSX1-207ENST00000557285 FSIP2Q5CZC0 6907 aa8.48□□□□□ -1.05
VSX1-207ENST00000557285 A0A1B0GVX0 72 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms