RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 hADV29S1A0JD25 119 aa8.42□□□□□ -1.06
TUBB3-213ENST00000557262 LORP23490 312 aaPredicted RBP8.42□□□□□ -1.06
TUBB3-213ENST00000557262 KRTAP10-6P60371 365 aaPredicted RBP8.42□□□□□ -1.06
TUBB3-213ENST00000557262 Q6ZQY7 126 aa8.41□□□□□ -1.06
TUBB3-213ENST00000557262 M0R2T5 61 aa8.4□□□□□ -1.06
TUBB3-213ENST00000557262 OCIAD2Q56VL3 154 aa8.4□□□□□ -1.06
TUBB3-213ENST00000557262 COX6B2Q6YFQ2 88 aa8.4□□□□□ -1.06
TUBB3-213ENST00000557262 TRBV7-7A0A0K0K1E9 115 aa8.39□□□□□ -1.07
TUBB3-213ENST00000557262 HSBP1L1C9JCN9 74 aa8.38□□□□□ -1.07
TUBB3-213ENST00000557262 IGFL1Q6UW32 110 aa8.38□□□□□ -1.07
TUBB3-213ENST00000557262 CLEC2BQ92478 149 aa8.38□□□□□ -1.07
TUBB3-213ENST00000557262 FLGP20930 4061 aaPredicted RBP8.37□□□□□ -1.07
TUBB3-213ENST00000557262 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.36□□□□□ -1.07
TUBB3-213ENST00000557262 S100A2P29034 98 aa8.35□□□□□ -1.07
TUBB3-213ENST00000557262 HIST3H2BBQ8N257 126 aa8.35□□□□□ -1.07
TUBB3-213ENST00000557262 HIST1H2BLQ99880 126 aa8.35□□□□□ -1.07
TUBB3-213ENST00000557262 PPDPFLQ8WWR9 84 aa8.34□□□□□ -1.07
TUBB3-213ENST00000557262 SNHG12Q9BXW3 62 aa8.34□□□□□ -1.07
TUBB3-213ENST00000557262 BVES-AS1Q5T3Y7 98 aa8.33□□□□□ -1.08
TUBB3-213ENST00000557262 ATP11AUNQ6ZP68 121 aa8.33□□□□□ -1.08
TUBB3-213ENST00000557262 OBSCN-AS1Q96MR7 158 aa8.32□□□□□ -1.08
TUBB3-213ENST00000557262 Q75L30 129 aa8.31□□□□□ -1.08
TUBB3-213ENST00000557262 HIST1H4GQ99525 98 aa8.31□□□□□ -1.08
TUBB3-213ENST00000557262 LST1O00453 97 aa8.3□□□□□ -1.08
TUBB3-213ENST00000557262 SCGB1D1O95968 90 aa8.3□□□□□ -1.08
TUBB3-213ENST00000557262 C12orf57Q99622 126 aa8.3□□□□□ -1.08
TUBB3-213ENST00000557262 H3BUT2 72 aa8.27□□□□□ -1.09
TUBB3-213ENST00000557262 Q6Q795 121 aa8.26□□□□□ -1.09
TUBB3-213ENST00000557262 Q96NJ1 140 aa8.26□□□□□ -1.09
TUBB3-213ENST00000557262 SNCGO76070 127 aa8.25□□□□□ -1.09
TUBB3-213ENST00000557262 S100A6P06703 90 aa8.25□□□□□ -1.09
TUBB3-213ENST00000557262 COX8AP10176 69 aa8.24□□□□□ -1.09
TUBB3-213ENST00000557262 SS18L2Q9UHA2 77 aa8.24□□□□□ -1.09
TUBB3-213ENST00000557262 H0YGX0 51 aa8.22□□□□□ -1.09
TUBB3-213ENST00000557262 DLEU1O43261 78 aa8.22□□□□□ -1.09
TUBB3-213ENST00000557262 CFC1P0CG37 223 aa8.22□□□□□ -1.09
TUBB3-213ENST00000557262 TEN1Q86WV5 123 aa8.22□□□□□ -1.09
TUBB3-213ENST00000557262 NDUFV3P56181 108 aaKnown RBP8.21□□□□□ -1.1
TUBB3-213ENST00000557262 RAB37Q96AX2 223 aa8.21□□□□□ -1.1
TUBB3-213ENST00000557262 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
TUBB3-213ENST00000557262 A8MUU9 505 aa8.17□□□□□ -1.1
TUBB3-213ENST00000557262 FAM218AQ96MZ4 157 aa8.17□□□□□ -1.1
TUBB3-213ENST00000557262 A0A087WSZ3 146 aa8.16□□□□□ -1.1
TUBB3-213ENST00000557262 A0A0B4J2C4 111 aa8.16□□□□□ -1.1
TUBB3-213ENST00000557262 C14orf144Q96I85 54 aa8.16□□□□□ -1.1
TUBB3-213ENST00000557262 HIGD1BQ9P298 99 aa8.16□□□□□ -1.1
TUBB3-213ENST00000557262 H3BMG7 143 aa8.15□□□□□ -1.1
TUBB3-213ENST00000557262 GHRHP01286 108 aa8.15□□□□□ -1.1
TUBB3-213ENST00000557262 S100A1P23297 94 aa8.14□□□□□ -1.11
TUBB3-213ENST00000557262 TRBV20-1A0A075B6N2 111 aa8.13□□□□□ -1.11
TUBB3-213ENST00000557262 A0A1B0GX51 115 aa8.13□□□□□ -1.11
TUBB3-213ENST00000557262 FABP2P12104 132 aa8.12□□□□□ -1.11
TUBB3-213ENST00000557262 SPATA45Q537H7 98 aa8.11□□□□□ -1.11
TUBB3-213ENST00000557262 DSCR10P59022 87 aa8.1□□□□□ -1.11
TUBB3-213ENST00000557262 PRO1854Q9UHT4 67 aa8.1□□□□□ -1.11
TUBB3-213ENST00000557262 PAM16Q9Y3D7 125 aa8.1□□□□□ -1.11
TUBB3-213ENST00000557262 C2orf91Q6ZV80 131 aa8.09□□□□□ -1.11
TUBB3-213ENST00000557262 CEND1Q8N111 149 aa8.09□□□□□ -1.11
TUBB3-213ENST00000557262 A0A1W2PNM2 257 aa8.08□□□□□ -1.12
TUBB3-213ENST00000557262 KRTAP9-8Q9BYQ0 159 aa8.08□□□□□ -1.12
TUBB3-213ENST00000557262 TMEM238LA0A1B0GVL6 79 aa8.06□□□□□ -1.12
TUBB3-213ENST00000557262 A6NJY4 79 aa8.06□□□□□ -1.12
TUBB3-213ENST00000557262 LINC00313P59037 77 aa8.06□□□□□ -1.12
TUBB3-213ENST00000557262 SIGMAR1Q99720 223 aa8.06□□□□□ -1.12
TUBB3-213ENST00000557262 VAMP8Q9BV40 100 aa8.06□□□□□ -1.12
TUBB3-213ENST00000557262 ANKRD29Q8N6D5 301 aa8.05□□□□□ -1.12
TUBB3-213ENST00000557262 TRBV7-4A0A0J9YYF1 115 aa8.03□□□□□ -1.12
TUBB3-213ENST00000557262 KRTAP16-1A8MUX0 517 aa8.03□□□□□ -1.12
TUBB3-213ENST00000557262 TRIAP1O43715 76 aa8.03□□□□□ -1.12
TUBB3-213ENST00000557262 IGKV4-1P06312 121 aa8.03□□□□□ -1.12
TUBB3-213ENST00000557262 FXYD2P54710 66 aa8.02□□□□□ -1.13
TUBB3-213ENST00000557262 H3BQ85 93 aa8.01□□□□□ -1.13
TUBB3-213ENST00000557262 ORMDL1Q9P0S3 153 aa8.01□□□□□ -1.13
TUBB3-213ENST00000557262 DNAL4O96015 105 aa8□□□□□ -1.13
TUBB3-213ENST00000557262 USH2AO75445 5202 aa7.98□□□□□ -1.13
TUBB3-213ENST00000557262 FAM236DA0A1B0GTK5 79 aa7.98□□□□□ -1.13
TUBB3-213ENST00000557262 TMEM256-PLSCR3K7ERE1 68 aa7.98□□□□□ -1.13
TUBB3-213ENST00000557262 FAM236CP0DP71 79 aa7.98□□□□□ -1.13
TUBB3-213ENST00000557262 NOTCH2NLQ7Z3S9 236 aa7.98□□□□□ -1.13
TUBB3-213ENST00000557262 LINC00472Q9H8W2 130 aa7.98□□□□□ -1.13
TUBB3-213ENST00000557262 A0A1B0GV72 72 aa7.97□□□□□ -1.13
TUBB3-213ENST00000557262 DEFB116Q30KQ4 102 aa7.97□□□□□ -1.13
TUBB3-213ENST00000557262 SSPOA2VEC9 5147 aa7.96□□□□□ -1.14
TUBB3-213ENST00000557262 PSMB2P49721 201 aa7.96□□□□□ -1.14
TUBB3-213ENST00000557262 CCKP06307 115 aa7.95□□□□□ -1.14
TUBB3-213ENST00000557262 COX6CP09669 75 aa7.95□□□□□ -1.14
TUBB3-213ENST00000557262 RBM12B-AS1Q9P1G2 102 aa7.95□□□□□ -1.14
TUBB3-213ENST00000557262 TRACP01848 142 aa7.94□□□□□ -1.14
TUBB3-213ENST00000557262 HRES1P13985 223 aa7.94□□□□□ -1.14
TUBB3-213ENST00000557262 MPLKIPQ8TAP9 179 aa7.94□□□□□ -1.14
TUBB3-213ENST00000557262 IGHV6-1A0A0B4J1U7 121 aa7.93□□□□□ -1.14
TUBB3-213ENST00000557262 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.93□□□□□ -1.14
TUBB3-213ENST00000557262 MT2AP02795 61 aa7.92□□□□□ -1.14
TUBB3-213ENST00000557262 HSD52Q0P140 79 aa7.92□□□□□ -1.14
TUBB3-213ENST00000557262 UBE2V1Q13404 147 aa7.91□□□□□ -1.14
TUBB3-213ENST00000557262 K7ERJ3 54 aa7.9□□□□□ -1.14
TUBB3-213ENST00000557262 KRTAP9-7A8MTY7 169 aa7.89□□□□□ -1.15
TUBB3-213ENST00000557262 C8orf87E5RJ46 101 aa7.88□□□□□ -1.15
TUBB3-213ENST00000557262 A0A1B0GVX0 72 aa7.86□□□□□ -1.15
TUBB3-213ENST00000557262 MT1FP04733 61 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms