RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 SPRR1AP35321 89 aa9.63□□□□□ -0.87
TMEM55B-207ENST00000557041 CDK2AP2O75956 126 aa9.62□□□□□ -0.87
TMEM55B-207ENST00000557041 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.62□□□□□ -0.87
TMEM55B-207ENST00000557041 IGLV5-37A0A075B6J1 123 aa9.62□□□□□ -0.87
TMEM55B-207ENST00000557041 CNBPP62633 177 aaKnown RBP9.62□□□□□ -0.87
TMEM55B-207ENST00000557041 LINC00474Q9P2X8 69 aa9.61□□□□□ -0.87
TMEM55B-207ENST00000557041 IGLV5-52A0A0A0MRZ9 124 aa9.61□□□□□ -0.87
TMEM55B-207ENST00000557041 H7BZZ5 65 aa9.6□□□□□ -0.87
TMEM55B-207ENST00000557041 RTL8CO15255 209 aa9.59□□□□□ -0.87
TMEM55B-207ENST00000557041 HCG22E2RYF7 251 aa9.58□□□□□ -0.88
TMEM55B-207ENST00000557041 HUWE1Q7Z6Z7 4374 aaKnown RBP9.58□□□□□ -0.88
TMEM55B-207ENST00000557041 LINC00208Q96KT6 92 aa9.58□□□□□ -0.88
TMEM55B-207ENST00000557041 NDUFB1O75438 58 aa9.57□□□□□ -0.88
TMEM55B-207ENST00000557041 C4orf26Q17RF5 130 aa9.57□□□□□ -0.88
TMEM55B-207ENST00000557041 DNAH10Q8IVF4 4471 aa9.57□□□□□ -0.88
TMEM55B-207ENST00000557041 MP68P56378 58 aa9.57□□□□□ -0.88
TMEM55B-207ENST00000557041 LYSTQ99698 3801 aa9.56□□□□□ -0.88
TMEM55B-207ENST00000557041 C1orf134Q5TEV5 83 aa9.56□□□□□ -0.88
TMEM55B-207ENST00000557041 MOBPQ13875 183 aa9.56□□□□□ -0.88
TMEM55B-207ENST00000557041 A0A087WTM6 91 aa9.55□□□□□ -0.88
TMEM55B-207ENST00000557041 DSCR10P59022 87 aa9.55□□□□□ -0.88
TMEM55B-207ENST00000557041 BCE1O60756 84 aa9.54□□□□□ -0.88
TMEM55B-207ENST00000557041 CASC2Q6XLA1 102 aa9.54□□□□□ -0.88
TMEM55B-207ENST00000557041 PKIGQ9Y2B9 76 aa9.54□□□□□ -0.88
TMEM55B-207ENST00000557041 CIRBP-AS1Q8TBR5 109 aa9.53□□□□□ -0.88
TMEM55B-207ENST00000557041 IGHV6-1A0A0B4J1U7 121 aa9.52□□□□□ -0.89
TMEM55B-207ENST00000557041 KLKP1Q107X0 134 aa9.52□□□□□ -0.89
TMEM55B-207ENST00000557041 TNP2Q05952 138 aa9.51□□□□□ -0.89
TMEM55B-207ENST00000557041 OXTP01178 125 aa9.5□□□□□ -0.89
TMEM55B-207ENST00000557041 NDUFC1O43677 76 aa9.5□□□□□ -0.89
TMEM55B-207ENST00000557041 FBN3Q75N90 2809 aa9.49□□□□□ -0.89
TMEM55B-207ENST00000557041 SPRR4Q96PI1 79 aa9.49□□□□□ -0.89
TMEM55B-207ENST00000557041 OCR1Q9BZK8 76 aa9.49□□□□□ -0.89
TMEM55B-207ENST00000557041 PSORS1C2Q9UIG4 136 aa9.49□□□□□ -0.89
TMEM55B-207ENST00000557041 SERP1Q9Y6X1 66 aa9.48□□□□□ -0.89
TMEM55B-207ENST00000557041 PCOTHQ58A44 107 aa9.45□□□□□ -0.9
TMEM55B-207ENST00000557041 RPS28P62857 69 aaKnown RBP9.44□□□□□ -0.9
TMEM55B-207ENST00000557041 MEGF8Q7Z7M0 2845 aa9.44□□□□□ -0.9
TMEM55B-207ENST00000557041 H0Y9P7 68 aa9.43□□□□□ -0.9
TMEM55B-207ENST00000557041 A0A1B0GW54 56 aa9.42□□□□□ -0.9
TMEM55B-207ENST00000557041 CMYA5Q8N3K9 4069 aa9.42□□□□□ -0.9
TMEM55B-207ENST00000557041 RETNLBQ9BQ08 111 aa9.4□□□□□ -0.9
TMEM55B-207ENST00000557041 SPACA4Q8TDM5 124 aa9.4□□□□□ -0.9
TMEM55B-207ENST00000557041 Q6ZRN7 208 aaPredicted RBP9.39□□□□□ -0.91
TMEM55B-207ENST00000557041 BRK1Q8WUW1 75 aa9.39□□□□□ -0.91
TMEM55B-207ENST00000557041 ZNF706Q9Y5V0 76 aaPredicted RBP9.39□□□□□ -0.91
TMEM55B-207ENST00000557041 A0A0U1RQV1 116 aa9.39□□□□□ -0.91
TMEM55B-207ENST00000557041 C5orf47Q569G3 176 aa9.39□□□□□ -0.91
TMEM55B-207ENST00000557041 SMIM26A0A096LP01 95 aa9.39□□□□□ -0.91
TMEM55B-207ENST00000557041 PRR15Q8IV56 129 aa9.38□□□□□ -0.91
TMEM55B-207ENST00000557041 hDV103S1A0JD37 113 aa9.37□□□□□ -0.91
TMEM55B-207ENST00000557041 A8MWP4 228 aa9.37□□□□□ -0.91
TMEM55B-207ENST00000557041 C1orf64Q8NEQ6 169 aa9.36□□□□□ -0.91
TMEM55B-207ENST00000557041 PLECQ15149 4684 aaKnown RBP9.36□□□□□ -0.91
TMEM55B-207ENST00000557041 ZNF861PO60384 105 aa9.35□□□□□ -0.91
TMEM55B-207ENST00000557041 PSPHP1O15172 72 aa9.34□□□□□ -0.91
TMEM55B-207ENST00000557041 DNAH9Q9NYC9 4486 aa9.34□□□□□ -0.91
TMEM55B-207ENST00000557041 ATP5EP56381 51 aaPredicted RBP9.32□□□□□ -0.92
TMEM55B-207ENST00000557041 FAM229BQ4G0N7 80 aa9.32□□□□□ -0.92
TMEM55B-207ENST00000557041 KRTAP10-2P60368 255 aa9.29□□□□□ -0.92
TMEM55B-207ENST00000557041 LINC00472Q9H8W2 130 aa9.27□□□□□ -0.93
TMEM55B-207ENST00000557041 IGLV8-61A0A075B6I0 122 aa9.27□□□□□ -0.93
TMEM55B-207ENST00000557041 DNHD1Q96M86 4753 aa9.26□□□□□ -0.93
TMEM55B-207ENST00000557041 TRAV22A0A0B4J277 110 aa9.26□□□□□ -0.93
TMEM55B-207ENST00000557041 Q5XG85 94 aa9.26□□□□□ -0.93
TMEM55B-207ENST00000557041 IGLV7-43P04211 117 aa9.25□□□□□ -0.93
TMEM55B-207ENST00000557041 C4orf48Q5BLP8 95 aa9.25□□□□□ -0.93
TMEM55B-207ENST00000557041 DNAH7Q8WXX0 4024 aa9.25□□□□□ -0.93
TMEM55B-207ENST00000557041 SPRR1BP22528 89 aa9.24□□□□□ -0.93
TMEM55B-207ENST00000557041 FP248Q71RG6 208 aaPredicted RBP9.24□□□□□ -0.93
TMEM55B-207ENST00000557041 PRKDCP78527 4128 aaKnown RBP9.23□□□□□ -0.93
TMEM55B-207ENST00000557041 Q6ZR54 194 aa9.23□□□□□ -0.93
TMEM55B-207ENST00000557041 WWC2-AS2Q96NR7 200 aa9.23□□□□□ -0.93
TMEM55B-207ENST00000557041 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
TMEM55B-207ENST00000557041 LINC00336Q6ZUF6 198 aa9.22□□□□□ -0.93
TMEM55B-207ENST00000557041 SMR3BP02814 79 aaPredicted RBP9.21□□□□□ -0.94
TMEM55B-207ENST00000557041 PLAC8Q9NZF1 115 aa9.21□□□□□ -0.94
TMEM55B-207ENST00000557041 DNAH3Q8TD57 4116 aa9.2□□□□□ -0.94
TMEM55B-207ENST00000557041 STARD9Q9P2P6 4700 aa9.19□□□□□ -0.94
TMEM55B-207ENST00000557041 MMP24-AS1A0A0U1RRL7 71 aa9.19□□□□□ -0.94
TMEM55B-207ENST00000557041 A0A087X002 238 aa9.18□□□□□ -0.94
TMEM55B-207ENST00000557041 NOTCH2NLQ7Z3S9 236 aa9.18□□□□□ -0.94
TMEM55B-207ENST00000557041 A0A1B0GVX0 72 aa9.18□□□□□ -0.94
TMEM55B-207ENST00000557041 KRTAP13-1Q8IUC0 172 aa9.18□□□□□ -0.94
TMEM55B-207ENST00000557041 SVIPQ8NHG7 77 aa9.15□□□□□ -0.95
TMEM55B-207ENST00000557041 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.95
TMEM55B-207ENST00000557041 KRTAP10-1P60331 282 aa9.14□□□□□ -0.95
TMEM55B-207ENST00000557041 KMT2AQ03164 3969 aa9.14□□□□□ -0.95
TMEM55B-207ENST00000557041 KRTAP29-1A8MX34 341 aaPredicted RBP9.13□□□□□ -0.95
TMEM55B-207ENST00000557041 PLA2G1BP04054 148 aaKnown RBP9.13□□□□□ -0.95
TMEM55B-207ENST00000557041 A8MUN3 132 aa9.1□□□□□ -0.95
TMEM55B-207ENST00000557041 PRR15LQ9BU68 103 aa9.1□□□□□ -0.95
TMEM55B-207ENST00000557041 CHKB-CPT1BH3BT56 60 aa9.09□□□□□ -0.95
TMEM55B-207ENST00000557041 SPAG11AQ6PDA7 123 aa9.08□□□□□ -0.96
TMEM55B-207ENST00000557041 DMBT1Q9UGM3 2413 aaPredicted RBP9.08□□□□□ -0.96
TMEM55B-207ENST00000557041 DNAH1Q9P2D7 4330 aa9.08□□□□□ -0.96
TMEM55B-207ENST00000557041 TP53AIP1Q9HCN2 124 aa9.08□□□□□ -0.96
TMEM55B-207ENST00000557041 IGKV2D-30A0A075B6S6 120 aa9.07□□□□□ -0.96
TMEM55B-207ENST00000557041 IGKV2-30P06310 120 aa9.07□□□□□ -0.96
TMEM55B-207ENST00000557041 LINC00313P59037 77 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms