RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 LAMTOR3Q9UHA4 124 aa6.61□□□□□ -1.35
LINC01550-206ENST00000556462 JMJD7-PLA2G4BH0Y9G9 81 aa6.6□□□□□ -1.35
LINC01550-206ENST00000556462 IGLV7-43P04211 117 aa6.59□□□□□ -1.35
LINC01550-206ENST00000556462 C14orf132Q9NPU4 83 aa6.59□□□□□ -1.35
LINC01550-206ENST00000556462 C3orf22Q8N5N4 141 aa6.59□□□□□ -1.35
LINC01550-206ENST00000556462 SMIM29Q86T20 159 aa6.58□□□□□ -1.36
LINC01550-206ENST00000556462 FAM240AA0A1B0GVK7 77 aa6.57□□□□□ -1.36
LINC01550-206ENST00000556462 RBM3P98179 157 aaKnown RBP6.57□□□□□ -1.36
LINC01550-206ENST00000556462 SPRR1BP22528 89 aa6.57□□□□□ -1.36
LINC01550-206ENST00000556462 GAGE2AQ6NT46 116 aa6.56□□□□□ -1.36
LINC01550-206ENST00000556462 KRTAP3-3Q9BYR6 98 aa6.56□□□□□ -1.36
LINC01550-206ENST00000556462 KRTAP3-2Q9BYR7 98 aa6.56□□□□□ -1.36
LINC01550-206ENST00000556462 CCDC179H3BU77 68 aa6.55□□□□□ -1.36
LINC01550-206ENST00000556462 SPRR4Q96PI1 79 aa6.55□□□□□ -1.36
LINC01550-206ENST00000556462 FAT1Q14517 4588 aa6.55□□□□□ -1.36
LINC01550-206ENST00000556462 TRBV7-4A0A0J9YYF1 115 aa6.54□□□□□ -1.36
LINC01550-206ENST00000556462 DSCR8Q96T75 97 aa6.54□□□□□ -1.36
LINC01550-206ENST00000556462 LOC110117498A0A087WWA1 95 aa6.53□□□□□ -1.36
LINC01550-206ENST00000556462 TRBV7-7A0A0K0K1E9 115 aa6.53□□□□□ -1.36
LINC01550-206ENST00000556462 SMR3BP02814 79 aaPredicted RBP6.53□□□□□ -1.36
LINC01550-206ENST00000556462 Q6ZQT0 140 aa6.53□□□□□ -1.36
LINC01550-206ENST00000556462 CCKP06307 115 aa6.53□□□□□ -1.36
LINC01550-206ENST00000556462 LINC00483Q53H64 154 aa6.53□□□□□ -1.36
LINC01550-206ENST00000556462 IMUPQ9GZP8 106 aa6.52□□□□□ -1.37
LINC01550-206ENST00000556462 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
LINC01550-206ENST00000556462 KRTAP4-6Q9BYQ5 205 aa6.51□□□□□ -1.37
LINC01550-206ENST00000556462 ZNF706Q9Y5V0 76 aaPredicted RBP6.51□□□□□ -1.37
LINC01550-206ENST00000556462 PDE6GP18545 87 aa6.51□□□□□ -1.37
LINC01550-206ENST00000556462 IGLV8-61A0A075B6I0 122 aa6.5□□□□□ -1.37
LINC01550-206ENST00000556462 ACYP1P07311 99 aa6.5□□□□□ -1.37
LINC01550-206ENST00000556462 RPL37AP61513 92 aaKnown RBP6.5□□□□□ -1.37
LINC01550-206ENST00000556462 SMIM20Q8N5G0 67 aa6.5□□□□□ -1.37
LINC01550-206ENST00000556462 ANAPC11Q9NYG5 84 aa6.5□□□□□ -1.37
LINC01550-206ENST00000556462 EPPK1P58107 5090 aaKnown RBP6.5□□□□□ -1.37
LINC01550-206ENST00000556462 F8WEM9 126 aa6.48□□□□□ -1.37
LINC01550-206ENST00000556462 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
LINC01550-206ENST00000556462 HSPG2P98160 4391 aa6.48□□□□□ -1.37
LINC01550-206ENST00000556462 A0A0G2JQZ4 141 aa6.47□□□□□ -1.37
LINC01550-206ENST00000556462 IGFL1Q6UW32 110 aa6.47□□□□□ -1.37
LINC01550-206ENST00000556462 CDK2AP2O75956 126 aa6.46□□□□□ -1.37
LINC01550-206ENST00000556462 LINC00846Q9NV44 126 aa6.46□□□□□ -1.37
LINC01550-206ENST00000556462 A0A1W2PNM2 257 aa6.46□□□□□ -1.38
LINC01550-206ENST00000556462 RYR1P21817 5038 aa6.45□□□□□ -1.38
LINC01550-206ENST00000556462 IGLV9-49A0A0B4J1Y8 123 aa6.45□□□□□ -1.38
LINC01550-206ENST00000556462 KRTAP1-4P0C5Y4 121 aa6.44□□□□□ -1.38
LINC01550-206ENST00000556462 SPINK6Q6UWN8 80 aa6.44□□□□□ -1.38
LINC01550-206ENST00000556462 Q8NBF4 154 aa6.44□□□□□ -1.38
LINC01550-206ENST00000556462 Q6JHZ5 121 aa6.43□□□□□ -1.38
LINC01550-206ENST00000556462 LINC00643Q86TS7 51 aa6.43□□□□□ -1.38
LINC01550-206ENST00000556462 KIAA1109Q2LD37 5005 aa6.42□□□□□ -1.38
LINC01550-206ENST00000556462 A0A087X002 238 aa6.41□□□□□ -1.38
LINC01550-206ENST00000556462 FAM236AA0A1B0GUQ0 79 aa6.41□□□□□ -1.38
LINC01550-206ENST00000556462 FAM236BA0A1B0GV22 79 aa6.41□□□□□ -1.38
LINC01550-206ENST00000556462 UQCRQO14949 82 aa6.41□□□□□ -1.38
LINC01550-206ENST00000556462 MOBPQ13875 183 aa6.41□□□□□ -1.38
LINC01550-206ENST00000556462 C9orf153Q5TBE3 101 aa6.41□□□□□ -1.38
LINC01550-206ENST00000556462 CRYGAP11844 174 aa6.41□□□□□ -1.38
LINC01550-206ENST00000556462 A0A1B0GW54 56 aa6.4□□□□□ -1.38
LINC01550-206ENST00000556462 KRTAP17-1Q9BYP8 105 aa6.4□□□□□ -1.38
LINC01550-206ENST00000556462 FAM229AH3BQW9 127 aa6.4□□□□□ -1.39
LINC01550-206ENST00000556462 FAM229BQ4G0N7 80 aa6.4□□□□□ -1.39
LINC01550-206ENST00000556462 PLA2G1BP04054 148 aaKnown RBP6.39□□□□□ -1.39
LINC01550-206ENST00000556462 KRTAP13-2Q52LG2 175 aa6.39□□□□□ -1.39
LINC01550-206ENST00000556462 UBL5Q9BZL1 73 aa6.38□□□□□ -1.39
LINC01550-206ENST00000556462 HIST1H4AP62805 103 aaKnown RBP6.37□□□□□ -1.39
LINC01550-206ENST00000556462 Q6ZVQ6 151 aa6.37□□□□□ -1.39
LINC01550-206ENST00000556462 SSBP3-AS1Q7Z2R9 100 aa6.37□□□□□ -1.39
LINC01550-206ENST00000556462 COX7CP15954 63 aa6.37□□□□□ -1.39
LINC01550-206ENST00000556462 Q5VSD8 79 aa6.37□□□□□ -1.39
LINC01550-206ENST00000556462 RPS28P62857 69 aaKnown RBP6.36□□□□□ -1.39
LINC01550-206ENST00000556462 A0A087WSZ3 146 aa6.35□□□□□ -1.39
LINC01550-206ENST00000556462 J3KT08 172 aa6.35□□□□□ -1.39
LINC01550-206ENST00000556462 ATOX1O00244 68 aa6.35□□□□□ -1.39
LINC01550-206ENST00000556462 NREPQ16612 68 aa6.34□□□□□ -1.39
LINC01550-206ENST00000556462 PKHD1L1Q86WI1 4243 aa6.34□□□□□ -1.4
LINC01550-206ENST00000556462 HRCT1Q6UXD1 115 aa6.34□□□□□ -1.4
LINC01550-206ENST00000556462 C5orf47Q569G3 176 aa6.32□□□□□ -1.4
LINC01550-206ENST00000556462 Q8N1X5 172 aa6.32□□□□□ -1.4
LINC01550-206ENST00000556462 PRR26Q8N8Z3 221 aa6.32□□□□□ -1.4
LINC01550-206ENST00000556462 IGKV3D-7A0A0C4DH55 119 aa6.32□□□□□ -1.4
LINC01550-206ENST00000556462 CD164Q04900 197 aa6.3□□□□□ -1.4
LINC01550-206ENST00000556462 TYMSOSQ8TAI1 123 aa6.3□□□□□ -1.4
LINC01550-206ENST00000556462 LRP1Q07954 4544 aaKnown RBP6.29□□□□□ -1.4
LINC01550-206ENST00000556462 TMEM258P61165 79 aa6.29□□□□□ -1.4
LINC01550-206ENST00000556462 ATP5EP2Q5VTU8 51 aa6.29□□□□□ -1.4
LINC01550-206ENST00000556462 CXCL6P80162 114 aa6.28□□□□□ -1.4
LINC01550-206ENST00000556462 LINC00472Q9H8W2 130 aa6.28□□□□□ -1.4
LINC01550-206ENST00000556462 BPY2O14599 106 aa6.27□□□□□ -1.41
LINC01550-206ENST00000556462 DEFB116Q30KQ4 102 aa6.27□□□□□ -1.41
LINC01550-206ENST00000556462 SERP2Q8N6R1 65 aa6.27□□□□□ -1.41
LINC01550-206ENST00000556462 Q96NJ1 140 aa6.26□□□□□ -1.41
LINC01550-206ENST00000556462 DSCR10P59022 87 aa6.25□□□□□ -1.41
LINC01550-206ENST00000556462 BIRC6Q9NR09 4857 aa6.24□□□□□ -1.41
LINC01550-206ENST00000556462 TNXBP22105 4242 aa6.24□□□□□ -1.41
LINC01550-206ENST00000556462 Q5XG85 94 aa6.24□□□□□ -1.41
LINC01550-206ENST00000556462 Q8N9L7 120 aa6.24□□□□□ -1.41
LINC01550-206ENST00000556462 FLG2Q5D862 2391 aaPredicted RBP6.23□□□□□ -1.41
LINC01550-206ENST00000556462 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
LINC01550-206ENST00000556462 MYCBP2O75592 4640 aa6.23□□□□□ -1.41
LINC01550-206ENST00000556462 A0A087WVE0 104 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms