RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 DNAJC13O75165 2243 aa0.3□□□□□ -2.36
SUPT16H-206ENST00000556309 UNC13CQ8NB66 2214 aa0.3□□□□□ -2.36
SUPT16H-206ENST00000556309 CACNA1CQ13936 2221 aa0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 ABCA4P78363 2273 aa0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 MMP24-AS1A0A0U1RRL7 71 aa0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 C9orf92A6NGG3 77 aa0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 H0YAA0 97 aa0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 K7EIM0 57 aa0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 SPINK1P00995 79 aa0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 DEFB130BP0DP73 79 aa0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 DEFB130AP0DP74 79 aa0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 RPS27P42677 84 aaKnown RBP0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 RPL39P62891 51 aaKnown RBP0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 RPS27LQ71UM5 84 aaKnown RBP0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 RPL39LQ96EH5 51 aaKnown RBP0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 RHPN1-AS1Q9BWJ2 59 aa0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 SYNE2Q8WXH0 6885 aaKnown RBP0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 KNTC1P50748 2209 aa0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 ASCC3Q8N3C0 2202 aaKnown RBP0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 WNK2Q9Y3S1 2297 aa0.29□□□□□ -2.36
SUPT16H-206ENST00000556309 NAV2Q8IVL1 2488 aa0.28□□□□□ -2.36
SUPT16H-206ENST00000556309 MUC5ACP98088 5654 aa0.28□□□□□ -2.36
SUPT16H-206ENST00000556309 GOLGA4Q13439 2230 aaKnown RBP0.28□□□□□ -2.36
SUPT16H-206ENST00000556309 TNP1P09430 55 aa0.28□□□□□ -2.36
SUPT16H-206ENST00000556309 SPRR1BP22528 89 aa0.28□□□□□ -2.36
SUPT16H-206ENST00000556309 DEFB135Q30KP9 77 aa0.28□□□□□ -2.36
SUPT16H-206ENST00000556309 SPINK6Q6UWN8 80 aa0.28□□□□□ -2.36
SUPT16H-206ENST00000556309 TTTY10Q9BZA0 68 aa0.28□□□□□ -2.36
SUPT16H-206ENST00000556309 S4R3F8 94 aa0.28□□□□□ -2.36
SUPT16H-206ENST00000556309 CACNA1EQ15878 2313 aa0.28□□□□□ -2.36
SUPT16H-206ENST00000556309 FSIP2Q5CZC0 6907 aa0.28□□□□□ -2.37
SUPT16H-206ENST00000556309 F5P12259 2224 aa0.28□□□□□ -2.37
SUPT16H-206ENST00000556309 CADP27708 2225 aa0.28□□□□□ -2.37
SUPT16H-206ENST00000556309 URB1O60287 2271 aaKnown RBP0.27□□□□□ -2.37
SUPT16H-206ENST00000556309 AHCTF1Q8WYP5 2266 aa0.27□□□□□ -2.37
SUPT16H-206ENST00000556309 A0A0D9SG42 100 aa0.27□□□□□ -2.37
SUPT16H-206ENST00000556309 M0R2T5 61 aa0.27□□□□□ -2.37
SUPT16H-206ENST00000556309 SPART-AS1P0CW21 52 aa0.27□□□□□ -2.37
SUPT16H-206ENST00000556309 CD52P31358 61 aa0.27□□□□□ -2.37
SUPT16H-206ENST00000556309 KLK9Q2XQG4 91 aa0.27□□□□□ -2.37
SUPT16H-206ENST00000556309 FAM208BQ5VWN6 2430 aa0.27□□□□□ -2.37
SUPT16H-206ENST00000556309 H3BSH0 61 aa0.26□□□□□ -2.37
SUPT16H-206ENST00000556309 RPS29P62273 56 aaKnown RBP0.26□□□□□ -2.37
SUPT16H-206ENST00000556309 RPL39P5Q59GN2 51 aa0.26□□□□□ -2.37
SUPT16H-206ENST00000556309 CLPSL2Q6UWE3 100 aa0.26□□□□□ -2.37
SUPT16H-206ENST00000556309 LEAP2Q969E1 77 aa0.26□□□□□ -2.37
SUPT16H-206ENST00000556309 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
SUPT16H-206ENST00000556309 TPRP12270 2363 aaKnown RBP0.26□□□□□ -2.37
SUPT16H-206ENST00000556309 NAV3Q8IVL0 2385 aa0.26□□□□□ -2.37
SUPT16H-206ENST00000556309 ABCA1O95477 2261 aa0.25□□□□□ -2.37
SUPT16H-206ENST00000556309 ASXL3Q9C0F0 2248 aa0.25□□□□□ -2.37
SUPT16H-206ENST00000556309 DEFB108AA8MXU0 73 aa0.25□□□□□ -2.37
SUPT16H-206ENST00000556309 H3BNG1 76 aa0.25□□□□□ -2.37
SUPT16H-206ENST00000556309 LELP1Q5T871 98 aa0.25□□□□□ -2.37
SUPT16H-206ENST00000556309 DEFB124Q8NES8 71 aa0.25□□□□□ -2.37
SUPT16H-206ENST00000556309 COX14Q96I36 57 aa0.25□□□□□ -2.37
SUPT16H-206ENST00000556309 U3KQA8 63 aa0.25□□□□□ -2.37
SUPT16H-206ENST00000556309 CNOT1A5YKK6 2376 aaKnown RBP0.25□□□□□ -2.37
SUPT16H-206ENST00000556309 PTPRQQ9UMZ3 2332 aa0.24□□□□□ -2.37
SUPT16H-206ENST00000556309 HTN1P15515 57 aa0.24□□□□□ -2.37
SUPT16H-206ENST00000556309 DEFB110Q30KQ9 67 aa0.24□□□□□ -2.37
SUPT16H-206ENST00000556309 PTPRZ1P23471 2315 aaPredicted RBP0.24□□□□□ -2.37
SUPT16H-206ENST00000556309 PDE4DIPQ5VU43 2346 aa0.24□□□□□ -2.37
SUPT16H-206ENST00000556309 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.24□□□□□ -2.377e-8■■■■■ 27.3
SUPT16H-206ENST00000556309 DOPEY2Q9Y3R5 2298 aa0.24□□□□□ -2.37
SUPT16H-206ENST00000556309 KNL1Q8NG31 2342 aa0.23□□□□□ -2.37
SUPT16H-206ENST00000556309 DEFB136Q30KP8 78 aa0.23□□□□□ -2.37
SUPT16H-206ENST00000556309 DEFB133Q30KQ1 61 aa0.23□□□□□ -2.37
SUPT16H-206ENST00000556309 SMR3AQ99954 134 aa0.23□□□□□ -2.37
SUPT16H-206ENST00000556309 PKDREJQ9NTG1 2253 aa0.23□□□□□ -2.37
SUPT16H-206ENST00000556309 MAST4O15021 2626 aa0.23□□□□□ -2.37
SUPT16H-206ENST00000556309 JMJD1CQ15652 2540 aa0.23□□□□□ -2.37
SUPT16H-206ENST00000556309 SPTBN2O15020 2390 aa0.23□□□□□ -2.37
SUPT16H-206ENST00000556309 CACNA1HO95180 2353 aa0.23□□□□□ -2.37
SUPT16H-206ENST00000556309 PLCE1Q9P212 2302 aa0.22□□□□□ -2.37
SUPT16H-206ENST00000556309 KMT2DO14686 5537 aa0.22□□□□□ -2.37
SUPT16H-206ENST00000556309 LINC01556Q5JQF7 62 aa0.22□□□□□ -2.37
SUPT16H-206ENST00000556309 ABCA2Q9BZC7 2435 aa0.21□□□□□ -2.38
SUPT16H-206ENST00000556309 APELAP0DMC3 54 aa0.21□□□□□ -2.38
SUPT16H-206ENST00000556309 DEFB104AQ8WTQ1 72 aa0.21□□□□□ -2.38
SUPT16H-206ENST00000556309 C2CD3Q4AC94 2353 aa0.21□□□□□ -2.38
SUPT16H-206ENST00000556309 ZDBF2Q9HCK1 2354 aa0.21□□□□□ -2.38
SUPT16H-206ENST00000556309 USF3Q68DE3 2245 aa0.21□□□□□ -2.38
SUPT16H-206ENST00000556309 TTC28Q96AY4 2481 aa0.21□□□□□ -2.38
SUPT16H-206ENST00000556309 SPTBN1Q01082 2364 aaKnown RBP0.2□□□□□ -2.38
SUPT16H-206ENST00000556309 AKAP6Q13023 2319 aa0.2□□□□□ -2.38
SUPT16H-206ENST00000556309 A0A096LNI7 61 aa0.2□□□□□ -2.38
SUPT16H-206ENST00000556309 SPRR2BP35325 72 aa0.2□□□□□ -2.38
SUPT16H-206ENST00000556309 DEFB108BQ8NET1 73 aa0.2□□□□□ -2.38
SUPT16H-206ENST00000556309 F8P00451 2351 aa0.2□□□□□ -2.38
SUPT16H-206ENST00000556309 PCNX1Q96RV3 2341 aa0.2□□□□□ -2.38
SUPT16H-206ENST00000556309 ASH1LQ9NR48 2969 aaKnown RBP0.2□□□□□ -2.38
SUPT16H-206ENST00000556309 PTPN13Q12923 2485 aa0.2□□□□□ -2.38
SUPT16H-206ENST00000556309 EP300Q09472 2414 aaPredicted RBP0.19□□□□□ -2.38
SUPT16H-206ENST00000556309 ANKRD17O75179 2603 aaKnown RBP0.19□□□□□ -2.38
SUPT16H-206ENST00000556309 WNK1Q9H4A3 2382 aa0.19□□□□□ -2.38
SUPT16H-206ENST00000556309 CSPG4Q6UVK1 2322 aa0.19□□□□□ -2.38
SUPT16H-206ENST00000556309 A0A096LPF7 62 aa0.19□□□□□ -2.38
SUPT16H-206ENST00000556309 SPRR2DP22532 72 aa0.19□□□□□ -2.38
SUPT16H-206ENST00000556309 SPRR2AP35326 72 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms