RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
GTF2A1-204ENST00000556268 TEX49A0A1B0GTD5 131 aa4.67□□□□□ -1.66
GTF2A1-204ENST00000556268 H7C2G1 150 aa4.67□□□□□ -1.66
GTF2A1-204ENST00000556268 SNAPINO95295 136 aa4.67□□□□□ -1.66
GTF2A1-204ENST00000556268 APOC3P02656 99 aa4.67□□□□□ -1.66
GTF2A1-204ENST00000556268 LGALS3P17931 250 aaKnown RBP4.67□□□□□ -1.66
GTF2A1-204ENST00000556268 AKR1D1P51857 326 aa4.67□□□□□ -1.66
GTF2A1-204ENST00000556268 HERVK_113P61574 105 aa4.67□□□□□ -1.66
GTF2A1-204ENST00000556268 COX6B2Q6YFQ2 88 aa4.67□□□□□ -1.66
GTF2A1-204ENST00000556268 LINC00308Q8TCZ7 52 aa4.67□□□□□ -1.66
GTF2A1-204ENST00000556268 FAM218AQ96MZ4 157 aa4.67□□□□□ -1.66
GTF2A1-204ENST00000556268 E9PLD3 99 aa4.66□□□□□ -1.66
GTF2A1-204ENST00000556268 H0Y8G0 127 aa4.66□□□□□ -1.66
GTF2A1-204ENST00000556268 IGKCP01834 107 aa4.66□□□□□ -1.66
GTF2A1-204ENST00000556268 ELOF1P60002 83 aaKnown RBP4.66□□□□□ -1.66
GTF2A1-204ENST00000556268 NPC2P61916 151 aa4.66□□□□□ -1.66
GTF2A1-204ENST00000556268 TAL2Q16559 108 aa4.66□□□□□ -1.66
GTF2A1-204ENST00000556268 SVBPQ8N300 66 aa4.66□□□□□ -1.66
GTF2A1-204ENST00000556268 PMCHL2Q9BQD1 86 aa4.66□□□□□ -1.66
GTF2A1-204ENST00000556268 SPANXCQ9NY87 97 aa4.66□□□□□ -1.66
GTF2A1-204ENST00000556268 TRBV7-6A0A0J9YX20 115 aa4.65□□□□□ -1.67
GTF2A1-204ENST00000556268 TIMM17BO60830 172 aa4.65□□□□□ -1.67
GTF2A1-204ENST00000556268 COX7BP24311 80 aa4.65□□□□□ -1.67
GTF2A1-204ENST00000556268 Q1RN00 199 aa4.65□□□□□ -1.67
GTF2A1-204ENST00000556268 DEFB105AQ8NG35 78 aa4.65□□□□□ -1.67
GTF2A1-204ENST00000556268 SPANXDQ9BXN6 97 aa4.65□□□□□ -1.67
GTF2A1-204ENST00000556268 HSPB8Q9UJY1 196 aa4.65□□□□□ -1.67
GTF2A1-204ENST00000556268 IGLV5-48A0A075B6I7 105 aa4.64□□□□□ -1.67
GTF2A1-204ENST00000556268 SERF1AO75920 110 aa4.64□□□□□ -1.67
GTF2A1-204ENST00000556268 C6orf99Q4VX62 202 aa4.64□□□□□ -1.67
GTF2A1-204ENST00000556268 LINC00518Q8N0U6 118 aa4.64□□□□□ -1.67
GTF2A1-204ENST00000556268 OR13C6PQ8NH95 151 aa4.64□□□□□ -1.67
GTF2A1-204ENST00000556268 USH2AO75445 5202 aa4.64□□□□□ -1.67
GTF2A1-204ENST00000556268 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
GTF2A1-204ENST00000556268 A0A0G2JQZ4 141 aa4.63□□□□□ -1.67
GTF2A1-204ENST00000556268 TRGC2P03986 189 aa4.63□□□□□ -1.67
GTF2A1-204ENST00000556268 FABP4P15090 132 aa4.62□□□□□ -1.67
GTF2A1-204ENST00000556268 NDUFA5Q16718 116 aa4.61□□□□□ -1.67
GTF2A1-204ENST00000556268 A0A1B0GWB2 263 aa4.6□□□□□ -1.67
GTF2A1-204ENST00000556268 TCL1BO95988 128 aa4.6□□□□□ -1.67
GTF2A1-204ENST00000556268 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
GTF2A1-204ENST00000556268 A4D1N5 150 aa4.57□□□□□ -1.68
GTF2A1-204ENST00000556268 SYS1-DBNDD2H3BUS1 97 aa4.57□□□□□ -1.68
GTF2A1-204ENST00000556268 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
GTF2A1-204ENST00000556268 ATP11AUNQ6ZP68 121 aa4.57□□□□□ -1.68
GTF2A1-204ENST00000556268 LINC01545Q5VT33 79 aa4.56□□□□□ -1.68
GTF2A1-204ENST00000556268 Q6Q795 121 aa4.56□□□□□ -1.68
GTF2A1-204ENST00000556268 ZNF815PA8K554 130 aa4.55□□□□□ -1.68
GTF2A1-204ENST00000556268 COLCA2A8K830 154 aa4.55□□□□□ -1.68
GTF2A1-204ENST00000556268 A8MU10 97 aa4.55□□□□□ -1.68
GTF2A1-204ENST00000556268 TTTY13Q9BZ97 58 aa4.55□□□□□ -1.68
GTF2A1-204ENST00000556268 IFITM1P13164 125 aa4.54□□□□□ -1.68
GTF2A1-204ENST00000556268 PET117Q6UWS5 81 aa4.54□□□□□ -1.68
GTF2A1-204ENST00000556268 OBSCN-AS1Q96MR7 158 aa4.54□□□□□ -1.68
GTF2A1-204ENST00000556268 TRBV7-7A0A0K0K1E9 115 aa4.53□□□□□ -1.68
GTF2A1-204ENST00000556268 C20orf202A1L168 122 aa4.53□□□□□ -1.68
GTF2A1-204ENST00000556268 A6NDN8 102 aa4.53□□□□□ -1.68
GTF2A1-204ENST00000556268 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
GTF2A1-204ENST00000556268 Q6ZVH6 145 aa4.53□□□□□ -1.68
GTF2A1-204ENST00000556268 PCP2Q8IVA1 136 aa4.53□□□□□ -1.68
GTF2A1-204ENST00000556268 NHP2Q9NX24 153 aaKnown RBP4.53□□□□□ -1.68
GTF2A1-204ENST00000556268 Q6JHZ5 121 aa4.52□□□□□ -1.69
GTF2A1-204ENST00000556268 MUSTN1Q8IVN3 82 aa4.52□□□□□ -1.69
GTF2A1-204ENST00000556268 SMIM11BQ8TCY0 68 aa4.52□□□□□ -1.69
GTF2A1-204ENST00000556268 COPS9Q8WXC6 57 aa4.52□□□□□ -1.69
GTF2A1-204ENST00000556268 OCIAD2Q56VL3 154 aa4.51□□□□□ -1.69
GTF2A1-204ENST00000556268 IGFL1Q6UW32 110 aa4.51□□□□□ -1.69
GTF2A1-204ENST00000556268 LINC00575Q6W349 94 aa4.51□□□□□ -1.69
GTF2A1-204ENST00000556268 C20orf166-AS1Q96NR2 134 aa4.51□□□□□ -1.69
GTF2A1-204ENST00000556268 TRAV13-2A0A0B4J235 113 aa4.5□□□□□ -1.69
GTF2A1-204ENST00000556268 A8MUU9 505 aa4.5□□□□□ -1.69
GTF2A1-204ENST00000556268 MT2AP02795 61 aa4.5□□□□□ -1.69
GTF2A1-204ENST00000556268 CLEC2BQ92478 149 aa4.49□□□□□ -1.69
GTF2A1-204ENST00000556268 F8WEM9 126 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 HIST1H2BKO60814 126 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 HIST1H2BJP06899 126 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 C3orf79P0CE67 100 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 HIST1H2BOP23527 126 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 HIST1H2BBP33778 126 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 HIST1H2BDP58876 126 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 HIST1H2BCP62807 126 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 HIST2H2BEQ16778 126 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 SCGB1D4Q6XE38 83 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 HIST1H2BHQ93079 126 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 Q96NJ1 140 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 HIST1H2BNQ99877 126 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 HIST1H2BMQ99879 126 aa4.48□□□□□ -1.69
GTF2A1-204ENST00000556268 MT1FP04733 61 aa4.47□□□□□ -1.69
GTF2A1-204ENST00000556268 VAMP3Q15836 100 aa4.47□□□□□ -1.69
GTF2A1-204ENST00000556268 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
GTF2A1-204ENST00000556268 TRBV20-1A0A075B6N2 111 aa4.46□□□□□ -1.7
GTF2A1-204ENST00000556268 hADV29S1A0JD25 119 aa4.46□□□□□ -1.7
GTF2A1-204ENST00000556268 LST1O00453 97 aa4.46□□□□□ -1.7
GTF2A1-204ENST00000556268 Q6ZQY7 126 aa4.46□□□□□ -1.7
GTF2A1-204ENST00000556268 SLC7A5P1Q8MH63 180 aa4.45□□□□□ -1.7
GTF2A1-204ENST00000556268 PPDPFLQ8WWR9 84 aa4.45□□□□□ -1.7
GTF2A1-204ENST00000556268 NDUFV3P56181 108 aaKnown RBP4.44□□□□□ -1.7
GTF2A1-204ENST00000556268 COA6Q5JTJ3 125 aaKnown RBP4.44□□□□□ -1.7
GTF2A1-204ENST00000556268 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms