RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 DEFB105AQ8NG35 78 aa6.68□□□□□ -1.34
TMEM260-208ENST00000555905 C9JAW5 83 aa6.67□□□□□ -1.34
TMEM260-208ENST00000555905 FAT1Q14517 4588 aa6.66□□□□□ -1.34
TMEM260-208ENST00000555905 TEX49A0A1B0GTD5 131 aa6.66□□□□□ -1.34
TMEM260-208ENST00000555905 GAGE2AQ6NT46 116 aa6.66□□□□□ -1.34
TMEM260-208ENST00000555905 PPDPFLQ8WWR9 84 aa6.66□□□□□ -1.34
TMEM260-208ENST00000555905 SPRR4Q96PI1 79 aa6.66□□□□□ -1.34
TMEM260-208ENST00000555905 BIRC6Q9NR09 4857 aa6.66□□□□□ -1.34
TMEM260-208ENST00000555905 SRRM2Q9UQ35 2752 aaKnown RBP6.65□□□□□ -1.34
TMEM260-208ENST00000555905 IGLV5-48A0A075B6I7 105 aa6.65□□□□□ -1.34
TMEM260-208ENST00000555905 TMEM256-PLSCR3K7ERE1 68 aa6.65□□□□□ -1.34
TMEM260-208ENST00000555905 BAALC-AS2P0C853 105 aa6.65□□□□□ -1.34
TMEM260-208ENST00000555905 SPRR1BP22528 89 aa6.63□□□□□ -1.35
TMEM260-208ENST00000555905 LINC01547P58512 204 aaPredicted RBP6.63□□□□□ -1.35
TMEM260-208ENST00000555905 UBE2V1Q13404 147 aa6.63□□□□□ -1.35
TMEM260-208ENST00000555905 LINC00483Q53H64 154 aa6.63□□□□□ -1.35
TMEM260-208ENST00000555905 Q8N377 158 aa6.63□□□□□ -1.35
TMEM260-208ENST00000555905 H3BT86 120 aa6.62□□□□□ -1.35
TMEM260-208ENST00000555905 MTURNQ8N3F0 131 aa6.62□□□□□ -1.35
TMEM260-208ENST00000555905 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
TMEM260-208ENST00000555905 ANKRD29Q8N6D5 301 aa6.61□□□□□ -1.35
TMEM260-208ENST00000555905 KRTAP9-9Q9BYP9 154 aa6.61□□□□□ -1.35
TMEM260-208ENST00000555905 KRTAP9-4Q9BYQ2 154 aa6.61□□□□□ -1.35
TMEM260-208ENST00000555905 LAMTOR3Q9UHA4 124 aa6.61□□□□□ -1.35
TMEM260-208ENST00000555905 F8W1H4 67 aa6.6□□□□□ -1.35
TMEM260-208ENST00000555905 F8WEM9 126 aa6.6□□□□□ -1.35
TMEM260-208ENST00000555905 ANAPC11Q9NYG5 84 aa6.6□□□□□ -1.35
TMEM260-208ENST00000555905 PKHD1L1Q86WI1 4243 aa6.59□□□□□ -1.35
TMEM260-208ENST00000555905 NDUFV3P56181 108 aaKnown RBP6.59□□□□□ -1.35
TMEM260-208ENST00000555905 FAM229BQ4G0N7 80 aa6.59□□□□□ -1.35
TMEM260-208ENST00000555905 PRO0461Q9UI25 63 aa6.59□□□□□ -1.35
TMEM260-208ENST00000555905 KRTAP1-4P0C5Y4 121 aa6.58□□□□□ -1.36
TMEM260-208ENST00000555905 SMIM29Q86T20 159 aa6.58□□□□□ -1.36
TMEM260-208ENST00000555905 C3orf22Q8N5N4 141 aa6.58□□□□□ -1.36
TMEM260-208ENST00000555905 IGLV9-49A0A0B4J1Y8 123 aa6.57□□□□□ -1.36
TMEM260-208ENST00000555905 CRYGAP11844 174 aa6.57□□□□□ -1.36
TMEM260-208ENST00000555905 C9orf153Q5TBE3 101 aa6.56□□□□□ -1.36
TMEM260-208ENST00000555905 LINC01600Q96MT4 127 aa6.56□□□□□ -1.36
TMEM260-208ENST00000555905 A0A1B0GV72 72 aa6.55□□□□□ -1.36
TMEM260-208ENST00000555905 JMJD7-PLA2G4BH0Y9G9 81 aa6.55□□□□□ -1.36
TMEM260-208ENST00000555905 A0A087X002 238 aa6.54□□□□□ -1.36
TMEM260-208ENST00000555905 RBM3P98179 157 aaKnown RBP6.54□□□□□ -1.36
TMEM260-208ENST00000555905 MOBPQ13875 183 aa6.54□□□□□ -1.36
TMEM260-208ENST00000555905 Q8NBF4 154 aa6.54□□□□□ -1.36
TMEM260-208ENST00000555905 IGLV8-61A0A075B6I0 122 aa6.53□□□□□ -1.36
TMEM260-208ENST00000555905 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
TMEM260-208ENST00000555905 HERC2O95714 4834 aa6.52□□□□□ -1.37
TMEM260-208ENST00000555905 Q6JHZ5 121 aa6.52□□□□□ -1.37
TMEM260-208ENST00000555905 PRR26Q8N8Z3 221 aa6.52□□□□□ -1.37
TMEM260-208ENST00000555905 TYMSOSQ8TAI1 123 aa6.52□□□□□ -1.37
TMEM260-208ENST00000555905 DSCR8Q96T75 97 aa6.52□□□□□ -1.37
TMEM260-208ENST00000555905 ETDBQ3ZM63 59 aa6.51□□□□□ -1.37
TMEM260-208ENST00000555905 KRTAP13-2Q52LG2 175 aa6.51□□□□□ -1.37
TMEM260-208ENST00000555905 SSBP3-AS1Q7Z2R9 100 aa6.51□□□□□ -1.37
TMEM260-208ENST00000555905 TEN1Q86WV5 123 aa6.51□□□□□ -1.37
TMEM260-208ENST00000555905 OBSCN-AS1Q96MR7 158 aa6.51□□□□□ -1.37
TMEM260-208ENST00000555905 PDE6GP18545 87 aa6.49□□□□□ -1.37
TMEM260-208ENST00000555905 IGFL1Q6UW32 110 aa6.49□□□□□ -1.37
TMEM260-208ENST00000555905 C14orf132Q9NPU4 83 aa6.49□□□□□ -1.37
TMEM260-208ENST00000555905 TRBV7-4A0A0J9YYF1 115 aa6.48□□□□□ -1.37
TMEM260-208ENST00000555905 OXTP01178 125 aa6.48□□□□□ -1.37
TMEM260-208ENST00000555905 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
TMEM260-208ENST00000555905 LOC110117498A0A087WWA1 95 aa6.47□□□□□ -1.37
TMEM260-208ENST00000555905 C21orf62-AS1Q17RA5 79 aa6.47□□□□□ -1.37
TMEM260-208ENST00000555905 FLG2Q5D862 2391 aaPredicted RBP6.45□□□□□ -1.38
TMEM260-208ENST00000555905 KRTAP4-8A0A0G2JLE6 195 aa6.45□□□□□ -1.38
TMEM260-208ENST00000555905 A0A0G2JQZ4 141 aa6.45□□□□□ -1.38
TMEM260-208ENST00000555905 CCKP06307 115 aa6.45□□□□□ -1.38
TMEM260-208ENST00000555905 Q6ZQT0 140 aa6.45□□□□□ -1.38
TMEM260-208ENST00000555905 VPS25Q9BRG1 176 aa6.45□□□□□ -1.38
TMEM260-208ENST00000555905 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
TMEM260-208ENST00000555905 CD164Q04900 197 aa6.44□□□□□ -1.38
TMEM260-208ENST00000555905 LINC00304Q8N9R0 145 aa6.44□□□□□ -1.38
TMEM260-208ENST00000555905 SPAG11AQ6PDA7 123 aa6.43□□□□□ -1.38
TMEM260-208ENST00000555905 HRCT1Q6UXD1 115 aa6.43□□□□□ -1.38
TMEM260-208ENST00000555905 A0A1W2PNM2 257 aa6.42□□□□□ -1.38
TMEM260-208ENST00000555905 KRTAP29-1A8MX34 341 aaPredicted RBP6.42□□□□□ -1.38
TMEM260-208ENST00000555905 Q6Q795 121 aa6.42□□□□□ -1.38
TMEM260-208ENST00000555905 ABCA13Q86UQ4 5058 aa6.42□□□□□ -1.38
TMEM260-208ENST00000555905 FAT3Q8TDW7 4589 aa6.41□□□□□ -1.38
TMEM260-208ENST00000555905 LRP1Q07954 4544 aaKnown RBP6.4□□□□□ -1.38
TMEM260-208ENST00000555905 TRBV7-7A0A0K0K1E9 115 aa6.4□□□□□ -1.38
TMEM260-208ENST00000555905 A0A1B0GW54 56 aa6.4□□□□□ -1.38
TMEM260-208ENST00000555905 SPINK1P00995 79 aa6.4□□□□□ -1.38
TMEM260-208ENST00000555905 MT1HL1P0DM35 61 aa6.39□□□□□ -1.39
TMEM260-208ENST00000555905 LCE4AQ5TA78 99 aa6.39□□□□□ -1.39
TMEM260-208ENST00000555905 MYCBP2O75592 4640 aa6.39□□□□□ -1.39
TMEM260-208ENST00000555905 J3QR89 54 aa6.38□□□□□ -1.39
TMEM260-208ENST00000555905 LIMD2Q9BT23 127 aa6.38□□□□□ -1.39
TMEM260-208ENST00000555905 A0A087WSZ3 146 aa6.37□□□□□ -1.39
TMEM260-208ENST00000555905 RPS29P62273 56 aaKnown RBP6.37□□□□□ -1.39
TMEM260-208ENST00000555905 SS18L2Q9UHA2 77 aa6.37□□□□□ -1.39
TMEM260-208ENST00000555905 TNXBP22105 4242 aa6.36□□□□□ -1.39
TMEM260-208ENST00000555905 ACYP1P07311 99 aa6.35□□□□□ -1.39
TMEM260-208ENST00000555905 FAM240AA0A1B0GVK7 77 aa6.34□□□□□ -1.39
TMEM260-208ENST00000555905 Q5XG85 94 aa6.34□□□□□ -1.39
TMEM260-208ENST00000555905 LCE1DQ5T752 114 aa6.33□□□□□ -1.4
TMEM260-208ENST00000555905 K7ERU9 68 aa6.32□□□□□ -1.4
TMEM260-208ENST00000555905 NREPQ16612 68 aa6.32□□□□□ -1.4
TMEM260-208ENST00000555905 PCLOQ9Y6V0 5065 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms