RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 KCNQ1DNQ9H478 68 aa4.2□□□□□ -1.74
PSEN1-214ENST00000555867 PSCAO43653 123 aa4.19□□□□□ -1.74
PSEN1-214ENST00000555867 CNBPP62633 177 aaKnown RBP4.19□□□□□ -1.74
PSEN1-214ENST00000555867 C9orf129Q5T035 196 aaKnown RBP4.19□□□□□ -1.74
PSEN1-214ENST00000555867 Q6JHZ5 121 aa4.19□□□□□ -1.74
PSEN1-214ENST00000555867 DHRS4-AS1Q9P1J3 65 aa4.19□□□□□ -1.74
PSEN1-214ENST00000555867 LAMTOR3Q9UHA4 124 aa4.19□□□□□ -1.74
PSEN1-214ENST00000555867 DSCR8Q96T75 97 aa4.18□□□□□ -1.74
PSEN1-214ENST00000555867 ANAPC13Q9BS18 74 aa4.18□□□□□ -1.74
PSEN1-214ENST00000555867 NDUFV3P56181 108 aaKnown RBP4.17□□□□□ -1.74
PSEN1-214ENST00000555867 C7orf33Q8WU49 177 aa4.17□□□□□ -1.74
PSEN1-214ENST00000555867 UBL5Q9BZL1 73 aa4.17□□□□□ -1.74
PSEN1-214ENST00000555867 IGLV1-50A0A075B6I6 118 aa4.16□□□□□ -1.74
PSEN1-214ENST00000555867 ETDCA0A1B0GVM5 59 aa4.16□□□□□ -1.74
PSEN1-214ENST00000555867 A0A1B0GW54 56 aa4.16□□□□□ -1.74
PSEN1-214ENST00000555867 SPRR1AP35321 89 aa4.16□□□□□ -1.74
PSEN1-214ENST00000555867 C1orf134Q5TEV5 83 aa4.16□□□□□ -1.74
PSEN1-214ENST00000555867 Q6ZQT0 140 aa4.16□□□□□ -1.74
PSEN1-214ENST00000555867 MRPL55Q7Z7F7 128 aaKnown RBP4.16□□□□□ -1.74
PSEN1-214ENST00000555867 SMCR5Q8TEV8 140 aa4.16□□□□□ -1.74
PSEN1-214ENST00000555867 TRBV7-4A0A0J9YYF1 115 aa4.15□□□□□ -1.75
PSEN1-214ENST00000555867 SERTAD4-AS1Q5TG53 156 aa4.15□□□□□ -1.75
PSEN1-214ENST00000555867 Q5VSD8 79 aa4.15□□□□□ -1.75
PSEN1-214ENST00000555867 Q6ZRX8 168 aa4.15□□□□□ -1.75
PSEN1-214ENST00000555867 LINC00846Q9NV44 126 aa4.15□□□□□ -1.75
PSEN1-214ENST00000555867 LINC00474Q9P2X8 69 aa4.15□□□□□ -1.75
PSEN1-214ENST00000555867 NBDYA0A0U1RRE5 68 aa4.14□□□□□ -1.75
PSEN1-214ENST00000555867 VPS13BQ7Z7G8 4022 aa4.14□□□□□ -1.75
PSEN1-214ENST00000555867 FAM236AA0A1B0GUQ0 79 aa4.13□□□□□ -1.75
PSEN1-214ENST00000555867 FAM236BA0A1B0GV22 79 aa4.13□□□□□ -1.75
PSEN1-214ENST00000555867 B5MCH6 92 aa4.13□□□□□ -1.75
PSEN1-214ENST00000555867 KRTAP4-16G5E9R7 235 aaPredicted RBP4.13□□□□□ -1.75
PSEN1-214ENST00000555867 ATOX1O00244 68 aa4.13□□□□□ -1.75
PSEN1-214ENST00000555867 KRTAP1-5Q9BYS1 174 aa4.13□□□□□ -1.75
PSEN1-214ENST00000555867 REG3GQ6UW15 175 aa4.12□□□□□ -1.75
PSEN1-214ENST00000555867 FAM19A5Q7Z5A7 132 aaPredicted RBP4.12□□□□□ -1.75
PSEN1-214ENST00000555867 HMCN2Q8NDA2 5059 aa4.11□□□□□ -1.75
PSEN1-214ENST00000555867 IGLV5-48A0A075B6I7 105 aa4.11□□□□□ -1.75
PSEN1-214ENST00000555867 A0A096LNI7 61 aa4.11□□□□□ -1.75
PSEN1-214ENST00000555867 KRTAP29-1A8MX34 341 aaPredicted RBP4.11□□□□□ -1.75
PSEN1-214ENST00000555867 HIST1H4AP62805 103 aaKnown RBP4.11□□□□□ -1.75
PSEN1-214ENST00000555867 CXCL6P80162 114 aa4.11□□□□□ -1.75
PSEN1-214ENST00000555867 C9orf163Q8N9P6 203 aa4.11□□□□□ -1.75
PSEN1-214ENST00000555867 RPL37AP8A6NKH3 93 aa4.1□□□□□ -1.75
PSEN1-214ENST00000555867 BCE1O60756 84 aa4.1□□□□□ -1.75
PSEN1-214ENST00000555867 SMR3BP02814 79 aaPredicted RBP4.1□□□□□ -1.75
PSEN1-214ENST00000555867 FAM168BA1KXE4 195 aa4.09□□□□□ -1.75
PSEN1-214ENST00000555867 LRCOL1A6NCL2 159 aa4.09□□□□□ -1.75
PSEN1-214ENST00000555867 F8WEM9 126 aa4.09□□□□□ -1.75
PSEN1-214ENST00000555867 H0Y9J4 135 aa4.09□□□□□ -1.75
PSEN1-214ENST00000555867 UQCRQO14949 82 aa4.09□□□□□ -1.75
PSEN1-214ENST00000555867 FUSP35637 526 aaKnown RBP eCLIP4.09□□□□□ -1.75
PSEN1-214ENST00000555867 UBE2BP63146 152 aa4.09□□□□□ -1.75
PSEN1-214ENST00000555867 Q6ZRN7 208 aaPredicted RBP4.09□□□□□ -1.75
PSEN1-214ENST00000555867 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.08□□□□□ -1.76
PSEN1-214ENST00000555867 IGKV3D-7A0A0C4DH55 119 aa4.08□□□□□ -1.76
PSEN1-214ENST00000555867 IGKV2-24A0A0C4DH68 120 aa4.08□□□□□ -1.76
PSEN1-214ENST00000555867 LINC01547P58512 204 aaPredicted RBP4.08□□□□□ -1.76
PSEN1-214ENST00000555867 LRP1Q07954 4544 aaKnown RBP4.08□□□□□ -1.76
PSEN1-214ENST00000555867 Q6ZVQ6 151 aa4.08□□□□□ -1.76
PSEN1-214ENST00000555867 KRTAP7-1Q8IUC3 87 aa4.08□□□□□ -1.76
PSEN1-214ENST00000555867 Q8N377 158 aa4.08□□□□□ -1.76
PSEN1-214ENST00000555867 SMIM20Q8N5G0 67 aa4.08□□□□□ -1.76
PSEN1-214ENST00000555867 Q9BRP9 147 aa4.08□□□□□ -1.76
PSEN1-214ENST00000555867 FAM19A1Q7Z5A9 133 aa4.07□□□□□ -1.76
PSEN1-214ENST00000555867 COX7CP15954 63 aa4.06□□□□□ -1.76
PSEN1-214ENST00000555867 HAMPP81172 84 aa4.06□□□□□ -1.76
PSEN1-214ENST00000555867 C1orf137Q5JT78 98 aa4.06□□□□□ -1.76
PSEN1-214ENST00000555867 C3orf22Q8N5N4 141 aa4.06□□□□□ -1.76
PSEN1-214ENST00000555867 DEFB105AQ8NG35 78 aa4.06□□□□□ -1.76
PSEN1-214ENST00000555867 IGLV8-61A0A075B6I0 122 aa4.05□□□□□ -1.76
PSEN1-214ENST00000555867 A0A1W2PNN7 141 aa4.05□□□□□ -1.76
PSEN1-214ENST00000555867 NREPQ16612 68 aa4.05□□□□□ -1.76
PSEN1-214ENST00000555867 SERP2Q8N6R1 65 aa4.05□□□□□ -1.76
PSEN1-214ENST00000555867 Q8NBF4 154 aa4.05□□□□□ -1.76
PSEN1-214ENST00000555867 SPRR4Q96PI1 79 aa4.05□□□□□ -1.76
PSEN1-214ENST00000555867 A0A087WTM6 91 aa4.04□□□□□ -1.76
PSEN1-214ENST00000555867 SPRR1BP22528 89 aa4.04□□□□□ -1.76
PSEN1-214ENST00000555867 KRTAP10-1P60331 282 aa4.04□□□□□ -1.76
PSEN1-214ENST00000555867 A0A087WVE0 104 aa4.03□□□□□ -1.76
PSEN1-214ENST00000555867 CCDC179H3BU77 68 aa4.03□□□□□ -1.76
PSEN1-214ENST00000555867 UBE2AP49459 152 aa4.03□□□□□ -1.76
PSEN1-214ENST00000555867 C9orf153Q5TBE3 101 aa4.03□□□□□ -1.76
PSEN1-214ENST00000555867 SPACA4Q8TDM5 124 aa4.03□□□□□ -1.76
PSEN1-214ENST00000555867 HIGD2AQ9BW72 106 aa4.03□□□□□ -1.76
PSEN1-214ENST00000555867 LRP2P98164 4655 aa4.03□□□□□ -1.76
PSEN1-214ENST00000555867 RNF213Q63HN8 5207 aa4.02□□□□□ -1.77
PSEN1-214ENST00000555867 BPY2O14599 106 aa4.02□□□□□ -1.77
PSEN1-214ENST00000555867 ERC2-IT1O76042 136 aa4.02□□□□□ -1.77
PSEN1-214ENST00000555867 CRYGAP11844 174 aa4.02□□□□□ -1.77
PSEN1-214ENST00000555867 PRLHP81277 87 aa4.02□□□□□ -1.77
PSEN1-214ENST00000555867 PHF5AQ7RTV0 110 aaKnown RBP4.02□□□□□ -1.77
PSEN1-214ENST00000555867 ST20-AS1Q8NBB2 130 aa4.02□□□□□ -1.77
PSEN1-214ENST00000555867 ZNF706Q9Y5V0 76 aaPredicted RBP4.02□□□□□ -1.77
PSEN1-214ENST00000555867 A0A1W2PNM2 257 aa4.01□□□□□ -1.77
PSEN1-214ENST00000555867 CHTF8P0CG12 524 aa4.01□□□□□ -1.77
PSEN1-214ENST00000555867 RPL37AP61513 92 aaKnown RBP4.01□□□□□ -1.77
PSEN1-214ENST00000555867 SMIM29Q86T20 159 aa4.01□□□□□ -1.77
PSEN1-214ENST00000555867 DPH3Q96FX2 82 aa4.01□□□□□ -1.77
PSEN1-214ENST00000555867 TRAV7A0A075B6U4 112 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms