RNA–Protein interactions for RNA: ENST00000555554.1

CASC1-209, Transcript of cancer susceptibility 1, humanhuman

TSL 3

Gene CASC1, Length 403 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-209ENST00000555554 SPRR2BP35325 72 aa0.06□□□□□ -2.4
CASC1-209ENST00000555554 GNG13Q9P2W3 67 aa0.06□□□□□ -2.4
CASC1-209ENST00000555554 DEPDC5O75140 1603 aa0.05□□□□□ -2.4
CASC1-209ENST00000555554 TJP1Q07157 1748 aa0.05□□□□□ -2.4
CASC1-209ENST00000555554 ASXL1Q8IXJ9 1541 aa0.05□□□□□ -2.4
CASC1-209ENST00000555554 H0YGG7 62 aa0.05□□□□□ -2.4
CASC1-209ENST00000555554 NRAPQ86VF7 1730 aa0.04□□□□□ -2.4
CASC1-209ENST00000555554 WNK1Q9H4A3 2382 aa0.04□□□□□ -2.4
CASC1-209ENST00000555554 PKD1P98161 4303 aa0.04□□□□□ -2.4
CASC1-209ENST00000555554 MAP1BP46821 2468 aaKnown RBP0.04□□□□□ -2.4
CASC1-209ENST00000555554 COL6A3P12111 3177 aa0.04□□□□□ -2.4
CASC1-209ENST00000555554 LYNX1G3V0Z9 82 aa0.04□□□□□ -2.4
CASC1-209ENST00000555554 ABCA9Q8IUA7 1624 aa0.04□□□□□ -2.4
CASC1-209ENST00000555554 AKAP9Q99996 3911 aa0.04□□□□□ -2.4
CASC1-209ENST00000555554 NSD1Q96L73 2696 aaPredicted RBP0.04□□□□□ -2.4
CASC1-209ENST00000555554 ITSN1Q15811 1721 aa0.04□□□□□ -2.4
CASC1-209ENST00000555554 SYNE2Q8WXH0 6885 aaKnown RBP0.04□□□□□ -2.4
CASC1-209ENST00000555554 CUBNO60494 3623 aa0.03□□□□□ -2.4
CASC1-209ENST00000555554 RNF17Q9BXT8 1623 aaKnown RBP0.03□□□□□ -2.4
CASC1-209ENST00000555554 CRIP1P50238 77 aa0.03□□□□□ -2.4
CASC1-209ENST00000555554 FAT3Q8TDW7 4589 aa0.03□□□□□ -2.4
CASC1-209ENST00000555554 FLGP20930 4061 aaPredicted RBP0.03□□□□□ -2.41
CASC1-209ENST00000555554 DNMBPQ6XZF7 1577 aa0.02□□□□□ -2.41
CASC1-209ENST00000555554 THOC2Q8NI27 1593 aaKnown RBP0.02□□□□□ -2.41
CASC1-209ENST00000555554 APC2O95996 2303 aa0.02□□□□□ -2.41
CASC1-209ENST00000555554 ETDCA0A1B0GVM5 59 aa0.02□□□□□ -2.41
CASC1-209ENST00000555554 IAPPP10997 89 aa0.02□□□□□ -2.41
CASC1-209ENST00000555554 SVEP1Q4LDE5 3571 aa0.02□□□□□ -2.41
CASC1-209ENST00000555554 PRRC2CQ9Y520 2896 aaKnown RBP0.01□□□□□ -2.41
CASC1-209ENST00000555554 DNAH9Q9NYC9 4486 aa0.01□□□□□ -2.41
CASC1-209ENST00000555554 DEFB130BP0DP73 79 aa0.01□□□□□ -2.41
CASC1-209ENST00000555554 DEFB130AP0DP74 79 aa0.01□□□□□ -2.41
CASC1-209ENST00000555554 FLNBO75369 2602 aaKnown RBP0.01□□□□□ -2.41
CASC1-209ENST00000555554 FLNAP21333 2647 aaKnown RBP0.01□□□□□ -2.41
CASC1-209ENST00000555554 TNRC18O15417 2968 aaPredicted RBP0.01□□□□□ -2.41
CASC1-209ENST00000555554 MADDQ8WXG6 1647 aa0.01□□□□□ -2.41
CASC1-209ENST00000555554 NHSQ6T4R5 1651 aa0.01□□□□□ -2.41
CASC1-209ENST00000555554 NBPF19A0A087WUL8 3843 aa0.01□□□□□ -2.41
CASC1-209ENST00000555554 ACANP16112 2415 aa0.01□□□□□ -2.41
CASC1-209ENST00000555554 DSPP15924 2871 aaKnown RBP0□□□□□ -2.41
CASC1-209ENST00000555554 FSIP2Q5CZC0 6907 aa0□□□□□ -2.41
CASC1-209ENST00000555554 PDE4DIPQ5VU43 2346 aa0□□□□□ -2.41
CASC1-209ENST00000555554 MUC2Q02817 5179 aa-0□□□□□ -2.41
CASC1-209ENST00000555554 TENM2Q9NT68 2774 aa-0□□□□□ -2.41
CASC1-209ENST00000555554 ZC3H13Q5T200 1668 aaKnown RBP-0.01□□□□□ -2.41
CASC1-209ENST00000555554 PCNX1Q96RV3 2341 aa-0.01□□□□□ -2.41
CASC1-209ENST00000555554 BPTFQ12830 3046 aa-0.01□□□□□ -2.41
CASC1-209ENST00000555554 EFCAB5A4FU69 1503 aa-0.02□□□□□ -2.41
CASC1-209ENST00000555554 APOBP04114 4563 aaKnown RBP-0.02□□□□□ -2.41
CASC1-209ENST00000555554 DNAH3Q8TD57 4116 aa-0.02□□□□□ -2.41
CASC1-209ENST00000555554 DEFB114Q30KQ6 69 aa-0.02□□□□□ -2.41
CASC1-209ENST00000555554 MAP1AP78559 2803 aaPredicted RBP-0.02□□□□□ -2.41
CASC1-209ENST00000555554 MROH1Q8NDA8 1641 aa-0.02□□□□□ -2.41
CASC1-209ENST00000555554 GPR98Q8WXG9 6306 aa-0.02□□□□□ -2.41
CASC1-209ENST00000555554 INO80Q9ULG1 1556 aaPredicted RBP-0.02□□□□□ -2.41
CASC1-209ENST00000555554 KIAA0586Q9BVV6 1533 aa-0.03□□□□□ -2.41
CASC1-209ENST00000555554 ZANQ9Y493 2812 aa-0.03□□□□□ -2.41
CASC1-209ENST00000555554 LINC01549A6NIU2 74 aa-0.03□□□□□ -2.41
CASC1-209ENST00000555554 SACSQ9NZJ4 4579 aa-0.03□□□□□ -2.41
CASC1-209ENST00000555554 LAMA5O15230 3695 aa-0.03□□□□□ -2.41
CASC1-209ENST00000555554 HECTD1Q9ULT8 2610 aa-0.04□□□□□ -2.42
CASC1-209ENST00000555554 PKHD1L1Q86WI1 4243 aa-0.05□□□□□ -2.42
CASC1-209ENST00000555554 PRLHP81277 87 aa-0.05□□□□□ -2.42
CASC1-209ENST00000555554 ABCC6O95255 1503 aa-0.05□□□□□ -2.42
CASC1-209ENST00000555554 SPENQ96T58 3664 aaKnown RBP-0.05□□□□□ -2.42
CASC1-209ENST00000555554 A0A087WWC5 75 aa-0.06□□□□□ -2.42
CASC1-209ENST00000555554 KRTAP6-2Q3LI66 62 aa-0.06□□□□□ -2.42
CASC1-209ENST00000555554 MINOS1Q5TGZ0 78 aa-0.06□□□□□ -2.42
CASC1-209ENST00000555554 C3P01024 1663 aa-0.06□□□□□ -2.42
CASC1-209ENST00000555554 ANK3Q12955 4377 aaKnown RBP-0.06□□□□□ -2.42
CASC1-209ENST00000555554 VPS13DQ5THJ4 4388 aa-0.07□□□□□ -2.42
CASC1-209ENST00000555554 DNAH6Q9C0G6 4158 aa-0.07□□□□□ -2.42
CASC1-209ENST00000555554 SPRR2AP35326 72 aa-0.07□□□□□ -2.42
CASC1-209ENST00000555554 DEFB106AQ8N104 65 aa-0.07□□□□□ -2.42
CASC1-209ENST00000555554 HTTP42858 3142 aa-0.07□□□□□ -2.42
CASC1-209ENST00000555554 STAB1Q9NY15 2570 aa-0.07□□□□□ -2.42
CASC1-209ENST00000555554 NF1P21359 2839 aa-0.08□□□□□ -2.42
CASC1-209ENST00000555554 SMIM31A0A1B0GVY4 71 aa-0.08□□□□□ -2.42
CASC1-209ENST00000555554 SSPOA2VEC9 5147 aa-0.08□□□□□ -2.42
CASC1-209ENST00000555554 ZZEF1O43149 2961 aa-0.09□□□□□ -2.42
CASC1-209ENST00000555554 NBASA2RRP1 2371 aa-0.09□□□□□ -2.42
CASC1-209ENST00000555554 CCDC180Q9P1Z9 1646 aa-0.09□□□□□ -2.42
CASC1-209ENST00000555554 H3BNG1 76 aa-0.09□□□□□ -2.42
CASC1-209ENST00000555554 S4R3F8 94 aa-0.09□□□□□ -2.42
CASC1-209ENST00000555554 ITSN2Q9NZM3 1697 aa-0.09□□□□□ -2.42
CASC1-209ENST00000555554 CREBBPQ92793 2442 aa-0.09□□□□□ -2.42
CASC1-209ENST00000555554 KMT2CQ8NEZ4 4911 aaKnown RBP-0.1□□□□□ -2.42
CASC1-209ENST00000555554 SETD2Q9BYW2 2564 aaPredicted RBP-0.1□□□□□ -2.43
CASC1-209ENST00000555554 SPTBN4Q9H254 2564 aa-0.1□□□□□ -2.43
CASC1-209ENST00000555554 RPS27P42677 84 aaKnown RBP-0.1□□□□□ -2.43
CASC1-209ENST00000555554 WT1-ASQ06250 92 aa-0.1□□□□□ -2.43
CASC1-209ENST00000555554 RPS27LQ71UM5 84 aaKnown RBP-0.1□□□□□ -2.43
CASC1-209ENST00000555554 C6orf48Q9UBA6 75 aa-0.1□□□□□ -2.43
CASC1-209ENST00000555554 ABCA6Q8N139 1617 aa-0.1□□□□□ -2.43
CASC1-209ENST00000555554 PDZD2O15018 2839 aa-0.1□□□□□ -2.43
CASC1-209ENST00000555554 DMXL1Q9Y485 3027 aa-0.11□□□□□ -2.43
CASC1-209ENST00000555554 C9orf92A6NGG3 77 aa-0.11□□□□□ -2.43
CASC1-209ENST00000555554 NCBP2-AS2Q69YL0 99 aa-0.11□□□□□ -2.43
CASC1-209ENST00000555554 DNAH11Q96DT5 4516 aa-0.12□□□□□ -2.43
CASC1-209ENST00000555554 S100ZQ8WXG8 99 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms