RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 KRTAP11-1Q8IUC1 163 aa10.79□□□□□ -0.68
PPP4R3A-208ENST00000555462 PHF5AQ7RTV0 110 aaKnown RBP10.79□□□□□ -0.68
PPP4R3A-208ENST00000555462 HCG22E2RYF7 251 aa10.78□□□□□ -0.68
PPP4R3A-208ENST00000555462 DNAH10OSP0CZ25 163 aa10.78□□□□□ -0.68
PPP4R3A-208ENST00000555462 TNP2Q05952 138 aa10.78□□□□□ -0.68
PPP4R3A-208ENST00000555462 KRTAP1-5Q9BYS1 174 aa10.77□□□□□ -0.68
PPP4R3A-208ENST00000555462 CMYA5Q8N3K9 4069 aa10.77□□□□□ -0.68
PPP4R3A-208ENST00000555462 H3BNG1 76 aa10.76□□□□□ -0.69
PPP4R3A-208ENST00000555462 UBE2AP49459 152 aa10.76□□□□□ -0.69
PPP4R3A-208ENST00000555462 DNAH9Q9NYC9 4486 aa10.74□□□□□ -0.69
PPP4R3A-208ENST00000555462 TGP01266 2768 aa10.74□□□□□ -0.69
PPP4R3A-208ENST00000555462 H0Y9J4 135 aa10.73□□□□□ -0.69
PPP4R3A-208ENST00000555462 DNAH7Q8WXX0 4024 aa10.72□□□□□ -0.69
PPP4R3A-208ENST00000555462 hDV103S1A0JD37 113 aa10.72□□□□□ -0.69
PPP4R3A-208ENST00000555462 SPRR1AP35321 89 aa10.72□□□□□ -0.69
PPP4R3A-208ENST00000555462 ATP5EP56381 51 aaPredicted RBP10.72□□□□□ -0.69
PPP4R3A-208ENST00000555462 A8MUN3 132 aa10.7□□□□□ -0.7
PPP4R3A-208ENST00000555462 SPRR4Q96PI1 79 aa10.7□□□□□ -0.7
PPP4R3A-208ENST00000555462 HUWE1Q7Z6Z7 4374 aaKnown RBP10.7□□□□□ -0.7
PPP4R3A-208ENST00000555462 IGLV9-49A0A0B4J1Y8 123 aa10.68□□□□□ -0.7
PPP4R3A-208ENST00000555462 C1orf195Q5TG92 126 aa10.68□□□□□ -0.7
PPP4R3A-208ENST00000555462 UBE2DNLQ8IWF7 75 aa10.68□□□□□ -0.7
PPP4R3A-208ENST00000555462 PCOTHQ58A44 107 aa10.67□□□□□ -0.7
PPP4R3A-208ENST00000555462 TLX1NBP0CAT3 122 aa10.66□□□□□ -0.7
PPP4R3A-208ENST00000555462 ANAPC11Q9NYG5 84 aa10.65□□□□□ -0.7
PPP4R3A-208ENST00000555462 TRAV22A0A0B4J277 110 aa10.65□□□□□ -0.71
PPP4R3A-208ENST00000555462 MP68P56378 58 aa10.65□□□□□ -0.71
PPP4R3A-208ENST00000555462 CASC2Q6XLA1 102 aa10.64□□□□□ -0.71
PPP4R3A-208ENST00000555462 H0Y9P7 68 aa10.63□□□□□ -0.71
PPP4R3A-208ENST00000555462 PANO1I0J062 215 aa10.63□□□□□ -0.71
PPP4R3A-208ENST00000555462 ZCCHC13Q8WW36 166 aaKnown RBP10.61□□□□□ -0.71
PPP4R3A-208ENST00000555462 NDUFS5O43920 106 aa10.6□□□□□ -0.71
PPP4R3A-208ENST00000555462 PLA2G2DQ9UNK4 145 aa10.6□□□□□ -0.71
PPP4R3A-208ENST00000555462 DNAH1Q9P2D7 4330 aa10.59□□□□□ -0.71
PPP4R3A-208ENST00000555462 K7EIL1 84 aa10.58□□□□□ -0.72
PPP4R3A-208ENST00000555462 IGLV5-37A0A075B6J1 123 aa10.58□□□□□ -0.72
PPP4R3A-208ENST00000555462 CNBPP62633 177 aaKnown RBP10.57□□□□□ -0.72
PPP4R3A-208ENST00000555462 FRAS1Q86XX4 4008 aa10.57□□□□□ -0.72
PPP4R3A-208ENST00000555462 SPTSSBQ8NFR3 76 aa10.56□□□□□ -0.72
PPP4R3A-208ENST00000555462 B9D2Q9BPU9 175 aa10.56□□□□□ -0.72
PPP4R3A-208ENST00000555462 C16orf90A8MZG2 172 aa10.56□□□□□ -0.72
PPP4R3A-208ENST00000555462 PRR15Q8IV56 129 aa10.54□□□□□ -0.72
PPP4R3A-208ENST00000555462 FBN3Q75N90 2809 aa10.54□□□□□ -0.72
PPP4R3A-208ENST00000555462 CHKB-CPT1BH3BT56 60 aa10.53□□□□□ -0.72
PPP4R3A-208ENST00000555462 F8WDY8 70 aa10.53□□□□□ -0.72
PPP4R3A-208ENST00000555462 PRR15LQ9BU68 103 aa10.52□□□□□ -0.72
PPP4R3A-208ENST00000555462 LCE6AA0A183 80 aa10.52□□□□□ -0.73
PPP4R3A-208ENST00000555462 SPINK6Q6UWN8 80 aa10.5□□□□□ -0.73
PPP4R3A-208ENST00000555462 IGHV6-1A0A0B4J1U7 121 aa10.5□□□□□ -0.73
PPP4R3A-208ENST00000555462 PLECQ15149 4684 aaKnown RBP10.48□□□□□ -0.73
PPP4R3A-208ENST00000555462 V9GYY9 64 aa10.48□□□□□ -0.73
PPP4R3A-208ENST00000555462 KRTAP29-1A8MX34 341 aaPredicted RBP10.46□□□□□ -0.73
PPP4R3A-208ENST00000555462 Q1T7F1 81 aa10.45□□□□□ -0.74
PPP4R3A-208ENST00000555462 A0A1B0GW54 56 aa10.45□□□□□ -0.74
PPP4R3A-208ENST00000555462 A8MWP4 228 aa10.45□□□□□ -0.74
PPP4R3A-208ENST00000555462 SPAG11AQ6PDA7 123 aa10.45□□□□□ -0.74
PPP4R3A-208ENST00000555462 LINC00472Q9H8W2 130 aa10.44□□□□□ -0.74
PPP4R3A-208ENST00000555462 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.43□□□□□ -0.74
PPP4R3A-208ENST00000555462 DNAH3Q8TD57 4116 aa10.43□□□□□ -0.74
PPP4R3A-208ENST00000555462 PMAIP1Q13794 54 aa10.43□□□□□ -0.74
PPP4R3A-208ENST00000555462 NDUFB1O75438 58 aa10.43□□□□□ -0.74
PPP4R3A-208ENST00000555462 A0A087X002 238 aa10.42□□□□□ -0.74
PPP4R3A-208ENST00000555462 NOTCH2NLQ7Z3S9 236 aa10.42□□□□□ -0.74
PPP4R3A-208ENST00000555462 RETNLBQ9BQ08 111 aa10.42□□□□□ -0.74
PPP4R3A-208ENST00000555462 Q5VV11 94 aa10.42□□□□□ -0.74
PPP4R3A-208ENST00000555462 MEGF8Q7Z7M0 2845 aa10.4□□□□□ -0.74
PPP4R3A-208ENST00000555462 MOBPQ13875 183 aa10.39□□□□□ -0.75
PPP4R3A-208ENST00000555462 MMP24-AS1A0A0U1RRL7 71 aa10.39□□□□□ -0.75
PPP4R3A-208ENST00000555462 A6NED7 52 aa10.39□□□□□ -0.75
PPP4R3A-208ENST00000555462 COA5Q86WW8 74 aa10.39□□□□□ -0.75
PPP4R3A-208ENST00000555462 CYP4F30PQ9H0H9 118 aa10.39□□□□□ -0.75
PPP4R3A-208ENST00000555462 Q8N9P0 234 aaPredicted RBP10.38□□□□□ -0.75
PPP4R3A-208ENST00000555462 KMT2AQ03164 3969 aa10.36□□□□□ -0.75
PPP4R3A-208ENST00000555462 CD164Q04900 197 aa10.35□□□□□ -0.75
PPP4R3A-208ENST00000555462 SEC61GP60059 68 aa10.34□□□□□ -0.75
PPP4R3A-208ENST00000555462 IGLV8-61A0A075B6I0 122 aa10.34□□□□□ -0.75
PPP4R3A-208ENST00000555462 C9orf163Q8N9P6 203 aa10.33□□□□□ -0.76
PPP4R3A-208ENST00000555462 MDFIQ99750 246 aa10.33□□□□□ -0.76
PPP4R3A-208ENST00000555462 APLNQ9ULZ1 77 aa10.31□□□□□ -0.76
PPP4R3A-208ENST00000555462 CDK2AP2O75956 126 aa10.3□□□□□ -0.76
PPP4R3A-208ENST00000555462 STARD9Q9P2P6 4700 aa10.28□□□□□ -0.76
PPP4R3A-208ENST00000555462 LCA10Q71F78 164 aa10.27□□□□□ -0.77
PPP4R3A-208ENST00000555462 PRR26Q8N8Z3 221 aa10.27□□□□□ -0.77
PPP4R3A-208ENST00000555462 CIRBP-AS1Q8TBR5 109 aa10.27□□□□□ -0.77
PPP4R3A-208ENST00000555462 C8orf17Q9NRJ1 99 aa10.27□□□□□ -0.77
PPP4R3A-208ENST00000555462 NBDYA0A0U1RRE5 68 aa10.26□□□□□ -0.77
PPP4R3A-208ENST00000555462 Q96NJ1 140 aa10.26□□□□□ -0.77
PPP4R3A-208ENST00000555462 PSORS1C2Q9UIG4 136 aa10.25□□□□□ -0.77
PPP4R3A-208ENST00000555462 DNAH8Q96JB1 4490 aa10.24□□□□□ -0.77
PPP4R3A-208ENST00000555462 C14orf177Q52M58 125 aa10.23□□□□□ -0.77
PPP4R3A-208ENST00000555462 SPRR1BP22528 89 aa10.21□□□□□ -0.78
PPP4R3A-208ENST00000555462 SPINK7P58062 85 aa10.19□□□□□ -0.78
PPP4R3A-208ENST00000555462 Q5W150 140 aa10.19□□□□□ -0.78
PPP4R3A-208ENST00000555462 SPANXA2-OT1Q8N9U9 137 aa10.19□□□□□ -0.78
PPP4R3A-208ENST00000555462 LIMD2Q9BT23 127 aa10.19□□□□□ -0.78
PPP4R3A-208ENST00000555462 PRKDCP78527 4128 aaKnown RBP10.18□□□□□ -0.78
PPP4R3A-208ENST00000555462 IGLV7-46A0A075B6I9 117 aa10.18□□□□□ -0.78
PPP4R3A-208ENST00000555462 HRES1P13985 223 aa10.18□□□□□ -0.78
PPP4R3A-208ENST00000555462 A0A1B0GVX0 72 aa10.17□□□□□ -0.78
PPP4R3A-208ENST00000555462 HECTD4Q9Y4D8 3996 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms