RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 LINC00472Q9H8W2 130 aa5.09□□□□□ -1.6
LINC00641-201ENST00000555379 SRCAPQ6ZRS2 3230 aa5.08□□□□□ -1.6
LINC00641-201ENST00000555379 HELZ2Q9BYK8 2649 aaKnown RBP5.08□□□□□ -1.6
LINC00641-201ENST00000555379 SETD2Q9BYW2 2564 aaPredicted RBP5.07□□□□□ -1.6
LINC00641-201ENST00000555379 KRTAP10-1P60331 282 aa5.07□□□□□ -1.6
LINC00641-201ENST00000555379 HECTD1Q9ULT8 2610 aa5.04□□□□□ -1.6
LINC00641-201ENST00000555379 KRTAP1-5Q9BYS1 174 aa5.03□□□□□ -1.6
LINC00641-201ENST00000555379 NOTCH2NLQ7Z3S9 236 aa5.03□□□□□ -1.6
LINC00641-201ENST00000555379 RPL37P61927 97 aaKnown RBP5.02□□□□□ -1.61
LINC00641-201ENST00000555379 Q8N1X5 172 aa5.02□□□□□ -1.61
LINC00641-201ENST00000555379 FLNAP21333 2647 aaKnown RBP5.01□□□□□ -1.61
LINC00641-201ENST00000555379 FLNBO75369 2602 aaKnown RBP5.01□□□□□ -1.61
LINC00641-201ENST00000555379 Q5W150 140 aa5□□□□□ -1.61
LINC00641-201ENST00000555379 KRTAP4-16G5E9R7 235 aaPredicted RBP5□□□□□ -1.61
LINC00641-201ENST00000555379 H1FX-AS1Q4G0G2 97 aa5□□□□□ -1.61
LINC00641-201ENST00000555379 KRTAP10-2P60368 255 aa4.99□□□□□ -1.61
LINC00641-201ENST00000555379 ADM2Q7Z4H4 148 aa4.99□□□□□ -1.61
LINC00641-201ENST00000555379 Q6ZRN7 208 aaPredicted RBP4.98□□□□□ -1.61
LINC00641-201ENST00000555379 A0A0G2JQZ4 141 aa4.97□□□□□ -1.61
LINC00641-201ENST00000555379 ITPR3Q14573 2671 aa4.97□□□□□ -1.61
LINC00641-201ENST00000555379 BPTFQ12830 3046 aa4.97□□□□□ -1.61
LINC00641-201ENST00000555379 C20orf166-AS1Q96NR2 134 aa4.96□□□□□ -1.61
LINC00641-201ENST00000555379 R4GN34 69 aa4.96□□□□□ -1.62
LINC00641-201ENST00000555379 KMT2BQ9UMN6 2715 aaPredicted RBP4.94□□□□□ -1.62
LINC00641-201ENST00000555379 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
LINC00641-201ENST00000555379 A8MUU9 505 aa4.9□□□□□ -1.62
LINC00641-201ENST00000555379 MGAM2Q2M2H8 2515 aa4.9□□□□□ -1.63
LINC00641-201ENST00000555379 Q8NDZ9 215 aa4.89□□□□□ -1.63
LINC00641-201ENST00000555379 USP24Q9UPU5 2620 aa4.89□□□□□ -1.63
LINC00641-201ENST00000555379 WDR87Q6ZQQ6 2873 aa4.89□□□□□ -1.63
LINC00641-201ENST00000555379 A8MU10 97 aa4.87□□□□□ -1.63
LINC00641-201ENST00000555379 PANO1I0J062 215 aa4.87□□□□□ -1.63
LINC00641-201ENST00000555379 KRTAP13-1Q8IUC0 172 aa4.86□□□□□ -1.63
LINC00641-201ENST00000555379 KRTAP29-1A8MX34 341 aaPredicted RBP4.85□□□□□ -1.63
LINC00641-201ENST00000555379 M0QZ58 72 aa4.85□□□□□ -1.63
LINC00641-201ENST00000555379 MAST4O15021 2626 aa4.85□□□□□ -1.63
LINC00641-201ENST00000555379 ATRQ13535 2644 aa4.85□□□□□ -1.63
LINC00641-201ENST00000555379 PCNTO95613 3336 aa4.82□□□□□ -1.64
LINC00641-201ENST00000555379 CFAP46Q8IYW2 2715 aa4.82□□□□□ -1.64
LINC00641-201ENST00000555379 KRTAP11-1Q8IUC1 163 aa4.79□□□□□ -1.64
LINC00641-201ENST00000555379 UNC79Q9P2D8 2635 aa4.78□□□□□ -1.64
LINC00641-201ENST00000555379 ZNF292O60281 2723 aa4.77□□□□□ -1.65
LINC00641-201ENST00000555379 BAHCC1Q9P281 2608 aa4.76□□□□□ -1.65
LINC00641-201ENST00000555379 CENPFP49454 3210 aa4.75□□□□□ -1.65
LINC00641-201ENST00000555379 TPRXLQ17RH7 258 aa4.73□□□□□ -1.65
LINC00641-201ENST00000555379 KRTAP13-2Q52LG2 175 aa4.73□□□□□ -1.65
LINC00641-201ENST00000555379 STAB1Q9NY15 2570 aa4.72□□□□□ -1.65
LINC00641-201ENST00000555379 DNAH12Q6ZR08 3092 aa4.72□□□□□ -1.65
LINC00641-201ENST00000555379 A0A0C4DFX4 3053 aa4.72□□□□□ -1.65
LINC00641-201ENST00000555379 BRCA2P51587 3418 aa4.71□□□□□ -1.66
LINC00641-201ENST00000555379 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
LINC00641-201ENST00000555379 CEP350Q5VT06 3117 aa4.7□□□□□ -1.66
LINC00641-201ENST00000555379 KRTAP7-1Q8IUC3 87 aa4.66□□□□□ -1.66
LINC00641-201ENST00000555379 IGSF10Q6WRI0 2623 aa4.64□□□□□ -1.67
LINC00641-201ENST00000555379 NSD1Q96L73 2696 aaPredicted RBP4.63□□□□□ -1.67
LINC00641-201ENST00000555379 TEP1Q99973 2627 aaKnown RBP4.63□□□□□ -1.67
LINC00641-201ENST00000555379 COL6A5A8TX70 2615 aa4.62□□□□□ -1.67
LINC00641-201ENST00000555379 P0C880 135 aa4.62□□□□□ -1.67
LINC00641-201ENST00000555379 HTTP42858 3142 aa4.6□□□□□ -1.67
LINC00641-201ENST00000555379 C10orf95Q9H7T3 257 aa4.6□□□□□ -1.67
LINC00641-201ENST00000555379 KRTAP1-4P0C5Y4 121 aa4.59□□□□□ -1.68
LINC00641-201ENST00000555379 TNP1P09430 55 aa4.59□□□□□ -1.68
LINC00641-201ENST00000555379 MKI67P46013 3256 aaKnown RBP4.57□□□□□ -1.68
LINC00641-201ENST00000555379 XP32Q5T750 250 aa4.56□□□□□ -1.68
LINC00641-201ENST00000555379 TRANK1O15050 2925 aa4.56□□□□□ -1.68
LINC00641-201ENST00000555379 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
LINC00641-201ENST00000555379 CHD9Q3L8U1 2897 aa4.55□□□□□ -1.68
LINC00641-201ENST00000555379 ITPR2Q14571 2701 aa4.55□□□□□ -1.68
LINC00641-201ENST00000555379 LAMA2P24043 3122 aaKnown RBP4.54□□□□□ -1.68
LINC00641-201ENST00000555379 LAMA3Q16787 3333 aa4.53□□□□□ -1.68
LINC00641-201ENST00000555379 A0A1B0GVY2 172 aa4.53□□□□□ -1.68
LINC00641-201ENST00000555379 TEX15Q9BXT5 2789 aa4.53□□□□□ -1.68
LINC00641-201ENST00000555379 MAP1AP78559 2803 aaPredicted RBP4.5□□□□□ -1.69
LINC00641-201ENST00000555379 NBEAL1Q6ZS30 2694 aa4.5□□□□□ -1.69
LINC00641-201ENST00000555379 SETXQ7Z333 2677 aaKnown RBP4.49□□□□□ -1.69
LINC00641-201ENST00000555379 KRTAP13-3Q3SY46 172 aa4.49□□□□□ -1.69
LINC00641-201ENST00000555379 GCN1Q92616 2671 aaKnown RBP4.48□□□□□ -1.69
LINC00641-201ENST00000555379 KRTAP10-8P60410 259 aa4.48□□□□□ -1.69
LINC00641-201ENST00000555379 H0YAA0 97 aa4.47□□□□□ -1.69
LINC00641-201ENST00000555379 CDH23Q9H251 3354 aa4.46□□□□□ -1.7
LINC00641-201ENST00000555379 CHD7Q9P2D1 2997 aa4.44□□□□□ -1.7
LINC00641-201ENST00000555379 CENPEQ02224 2701 aa4.41□□□□□ -1.7
LINC00641-201ENST00000555379 NOTCH1P46531 2555 aa4.41□□□□□ -1.7
LINC00641-201ENST00000555379 SPTBN5Q9NRC6 3674 aaKnown RBP4.41□□□□□ -1.7
LINC00641-201ENST00000555379 DMBT1Q9UGM3 2413 aaPredicted RBP4.41□□□□□ -1.7
LINC00641-201ENST00000555379 PRRC2CQ9Y520 2896 aaKnown RBP4.4□□□□□ -1.7
LINC00641-201ENST00000555379 XIRP2A4UGR9 3374 aa4.4□□□□□ -1.71
LINC00641-201ENST00000555379 INE1O15225 51 aa4.39□□□□□ -1.71
LINC00641-201ENST00000555379 CHD6Q8TD26 2715 aa4.39□□□□□ -1.71
LINC00641-201ENST00000555379 C5orf42Q9H799 3197 aa4.39□□□□□ -1.71
LINC00641-201ENST00000555379 EYSQ5T1H1 3165 aa4.39□□□□□ -1.71
LINC00641-201ENST00000555379 RANBP2P49792 3224 aaKnown RBP4.38□□□□□ -1.71
LINC00641-201ENST00000555379 AKAP13Q12802 2813 aa4.38□□□□□ -1.71
LINC00641-201ENST00000555379 SZT2Q5T011 3432 aa4.38□□□□□ -1.71
LINC00641-201ENST00000555379 UNC80Q8N2C7 3258 aa4.38□□□□□ -1.71
LINC00641-201ENST00000555379 FLG2Q5D862 2391 aaPredicted RBP4.38□□□□□ -1.71
LINC00641-201ENST00000555379 HIVEP1P15822 2718 aa4.36□□□□□ -1.71
LINC00641-201ENST00000555379 REV3LO60673 3130 aa4.36□□□□□ -1.71
LINC00641-201ENST00000555379 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
LINC00641-201ENST00000555379 UBR5O95071 2799 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms