RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 LRCOL1A6NCL2 159 aa10.45□□□□□ -0.74
XRCC3-209ENST00000554913 BRK1Q8WUW1 75 aa10.45□□□□□ -0.74
XRCC3-209ENST00000554913 A0A087WSZ3 146 aa10.43□□□□□ -0.74
XRCC3-209ENST00000554913 WFDC13Q8IUB5 93 aa10.43□□□□□ -0.74
XRCC3-209ENST00000554913 C1orf64Q8NEQ6 169 aa10.42□□□□□ -0.74
XRCC3-209ENST00000554913 COL7A1Q02388 2944 aa10.41□□□□□ -0.74
XRCC3-209ENST00000554913 PRR4Q16378 134 aa10.41□□□□□ -0.74
XRCC3-209ENST00000554913 RPL37AP61513 92 aaKnown RBP10.4□□□□□ -0.74
XRCC3-209ENST00000554913 SRRM2Q9UQ35 2752 aaKnown RBP10.4□□□□□ -0.74
XRCC3-209ENST00000554913 KRTAP1-5Q9BYS1 174 aa10.39□□□□□ -0.75
XRCC3-209ENST00000554913 C16orf90A8MZG2 172 aa10.39□□□□□ -0.75
XRCC3-209ENST00000554913 IGLV8-61A0A075B6I0 122 aa10.38□□□□□ -0.75
XRCC3-209ENST00000554913 LYSTQ99698 3801 aa10.38□□□□□ -0.75
XRCC3-209ENST00000554913 DNAH10Q8IVF4 4471 aa10.37□□□□□ -0.75
XRCC3-209ENST00000554913 PKIGQ9Y2B9 76 aa10.37□□□□□ -0.75
XRCC3-209ENST00000554913 KRTAP11-1Q8IUC1 163 aa10.37□□□□□ -0.75
XRCC3-209ENST00000554913 UBE2AP49459 152 aa10.36□□□□□ -0.75
XRCC3-209ENST00000554913 CHTF8P0CG12 524 aa10.34□□□□□ -0.75
XRCC3-209ENST00000554913 PHF5AQ7RTV0 110 aaKnown RBP10.33□□□□□ -0.76
XRCC3-209ENST00000554913 CNBPP62633 177 aaKnown RBP10.33□□□□□ -0.76
XRCC3-209ENST00000554913 STAB2Q8WWQ8 2551 aa10.32□□□□□ -0.76
XRCC3-209ENST00000554913 DNAH9Q9NYC9 4486 aa10.32□□□□□ -0.76
XRCC3-209ENST00000554913 KRTAP29-1A8MX34 341 aaPredicted RBP10.32□□□□□ -0.76
XRCC3-209ENST00000554913 CYP4F30PQ9H0H9 118 aa10.31□□□□□ -0.76
XRCC3-209ENST00000554913 K7EIL1 84 aa10.31□□□□□ -0.76
XRCC3-209ENST00000554913 LINC00208Q96KT6 92 aa10.31□□□□□ -0.76
XRCC3-209ENST00000554913 MP68P56378 58 aa10.3□□□□□ -0.76
XRCC3-209ENST00000554913 SEC61GP60059 68 aa10.3□□□□□ -0.76
XRCC3-209ENST00000554913 Q1T7F1 81 aa10.29□□□□□ -0.76
XRCC3-209ENST00000554913 MDFIQ99750 246 aa10.29□□□□□ -0.76
XRCC3-209ENST00000554913 TRAV22A0A0B4J277 110 aa10.29□□□□□ -0.76
XRCC3-209ENST00000554913 NDUFB1O75438 58 aa10.28□□□□□ -0.76
XRCC3-209ENST00000554913 CASC2Q6XLA1 102 aa10.27□□□□□ -0.77
XRCC3-209ENST00000554913 PRR15Q8IV56 129 aa10.27□□□□□ -0.77
XRCC3-209ENST00000554913 CSMD3Q7Z407 3707 aa10.25□□□□□ -0.77
XRCC3-209ENST00000554913 PSPHP1O15172 72 aa10.25□□□□□ -0.77
XRCC3-209ENST00000554913 LINC00472Q9H8W2 130 aa10.25□□□□□ -0.77
XRCC3-209ENST00000554913 SPRR1BP22528 89 aa10.25□□□□□ -0.77
XRCC3-209ENST00000554913 H0Y9P7 68 aa10.24□□□□□ -0.77
XRCC3-209ENST00000554913 A8MWP4 228 aa10.23□□□□□ -0.77
XRCC3-209ENST00000554913 DNHD1Q96M86 4753 aa10.23□□□□□ -0.77
XRCC3-209ENST00000554913 TENM2Q9NT68 2774 aa10.22□□□□□ -0.77
XRCC3-209ENST00000554913 H0Y9J4 135 aa10.22□□□□□ -0.77
XRCC3-209ENST00000554913 UBE2DNLQ8IWF7 75 aa10.22□□□□□ -0.77
XRCC3-209ENST00000554913 B9D2Q9BPU9 175 aa10.21□□□□□ -0.77
XRCC3-209ENST00000554913 DNAH7Q8WXX0 4024 aa10.21□□□□□ -0.78
XRCC3-209ENST00000554913 PRKDCP78527 4128 aaKnown RBP10.18□□□□□ -0.78
XRCC3-209ENST00000554913 C14orf177Q52M58 125 aa10.17□□□□□ -0.78
XRCC3-209ENST00000554913 C1orf195Q5TG92 126 aa10.17□□□□□ -0.78
XRCC3-209ENST00000554913 PANO1I0J062 215 aa10.17□□□□□ -0.78
XRCC3-209ENST00000554913 C9orf163Q8N9P6 203 aa10.16□□□□□ -0.78
XRCC3-209ENST00000554913 APLNQ9ULZ1 77 aa10.15□□□□□ -0.78
XRCC3-209ENST00000554913 A8MUN3 132 aa10.15□□□□□ -0.78
XRCC3-209ENST00000554913 H3BPC8 53 aa10.15□□□□□ -0.78
XRCC3-209ENST00000554913 SPANXA2-OT1Q8N9U9 137 aa10.15□□□□□ -0.78
XRCC3-209ENST00000554913 PLECQ15149 4684 aaKnown RBP10.15□□□□□ -0.79
XRCC3-209ENST00000554913 MMP24-AS1A0A0U1RRL7 71 aa10.14□□□□□ -0.79
XRCC3-209ENST00000554913 KRTAP13-1Q8IUC0 172 aa10.12□□□□□ -0.79
XRCC3-209ENST00000554913 V9GYY9 64 aa10.1□□□□□ -0.79
XRCC3-209ENST00000554913 IGLV9-49A0A0B4J1Y8 123 aa10.09□□□□□ -0.79
XRCC3-209ENST00000554913 DYNC2H1Q8NCM8 4307 aaKnown RBP10.09□□□□□ -0.79
XRCC3-209ENST00000554913 Q96NJ1 140 aa10.08□□□□□ -0.8
XRCC3-209ENST00000554913 Q5VV11 94 aa10.07□□□□□ -0.8
XRCC3-209ENST00000554913 Q8N9P0 234 aaPredicted RBP10.06□□□□□ -0.8
XRCC3-209ENST00000554913 STARD9Q9P2P6 4700 aa10.06□□□□□ -0.8
XRCC3-209ENST00000554913 MEGF8Q7Z7M0 2845 aa10.05□□□□□ -0.8
XRCC3-209ENST00000554913 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.05□□□□□ -0.8
XRCC3-209ENST00000554913 A8MU10 97 aa10.04□□□□□ -0.8
XRCC3-209ENST00000554913 NBDYA0A0U1RRE5 68 aa10.04□□□□□ -0.8
XRCC3-209ENST00000554913 PCOTHQ58A44 107 aa10.03□□□□□ -0.8
XRCC3-209ENST00000554913 Q6ZRN7 208 aaPredicted RBP10.03□□□□□ -0.8
XRCC3-209ENST00000554913 MOBPQ13875 183 aa10.01□□□□□ -0.81
XRCC3-209ENST00000554913 ASB16-AS1Q495Z4 193 aa10.01□□□□□ -0.81
XRCC3-209ENST00000554913 IGLV7-46A0A075B6I9 117 aa10.01□□□□□ -0.81
XRCC3-209ENST00000554913 COA5Q86WW8 74 aa10□□□□□ -0.81
XRCC3-209ENST00000554913 C8orf17Q9NRJ1 99 aa10□□□□□ -0.81
XRCC3-209ENST00000554913 SPACA4Q8TDM5 124 aa9.99□□□□□ -0.81
XRCC3-209ENST00000554913 LIMD2Q9BT23 127 aa9.99□□□□□ -0.81
XRCC3-209ENST00000554913 PRR15LQ9BU68 103 aa9.99□□□□□ -0.81
XRCC3-209ENST00000554913 CD164Q04900 197 aa9.98□□□□□ -0.81
XRCC3-209ENST00000554913 CHKB-CPT1BH3BT56 60 aa9.98□□□□□ -0.81
XRCC3-209ENST00000554913 IGHV6-1A0A0B4J1U7 121 aa9.97□□□□□ -0.81
XRCC3-209ENST00000554913 TP53AIP1Q9HCN2 124 aa9.97□□□□□ -0.81
XRCC3-209ENST00000554913 LINC00483Q53H64 154 aa9.96□□□□□ -0.81
XRCC3-209ENST00000554913 ANAPC11Q9NYG5 84 aa9.96□□□□□ -0.81
XRCC3-209ENST00000554913 NDUFS5O43920 106 aa9.95□□□□□ -0.82
XRCC3-209ENST00000554913 A0A1B0GVX0 72 aa9.94□□□□□ -0.82
XRCC3-209ENST00000554913 Q6ZR54 194 aa9.94□□□□□ -0.82
XRCC3-209ENST00000554913 WWC2-AS2Q96NR7 200 aa9.94□□□□□ -0.82
XRCC3-209ENST00000554913 PMAIP1Q13794 54 aa9.93□□□□□ -0.82
XRCC3-209ENST00000554913 A0A087X002 238 aa9.92□□□□□ -0.82
XRCC3-209ENST00000554913 NOTCH2NLQ7Z3S9 236 aa9.92□□□□□ -0.82
XRCC3-209ENST00000554913 KMT2AQ03164 3969 aa9.92□□□□□ -0.82
XRCC3-209ENST00000554913 PSORS1C2Q9UIG4 136 aa9.91□□□□□ -0.82
XRCC3-209ENST00000554913 VPS13DQ5THJ4 4388 aa9.89□□□□□ -0.83
XRCC3-209ENST00000554913 CDK2AP2O75956 126 aa9.89□□□□□ -0.83
XRCC3-209ENST00000554913 MRPL34Q9BQ48 92 aaKnown RBP9.89□□□□□ -0.83
XRCC3-209ENST00000554913 A0A087WTM6 91 aa9.88□□□□□ -0.83
XRCC3-209ENST00000554913 ZNF706Q9Y5V0 76 aaPredicted RBP9.88□□□□□ -0.83
XRCC3-209ENST00000554913 IGLV5-52A0A0A0MRZ9 124 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms