RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 B5MCH6 92 aa6.3□□□□□ -1.4
SHMT2-215ENST00000554656 BAALC-AS2P0C853 105 aa6.3□□□□□ -1.4
SHMT2-215ENST00000554656 UBE2BP63146 152 aa6.3□□□□□ -1.4
SHMT2-215ENST00000554656 Q6ZRX8 168 aa6.3□□□□□ -1.4
SHMT2-215ENST00000554656 MTURNQ8N3F0 131 aa6.3□□□□□ -1.4
SHMT2-215ENST00000554656 ETDBQ3ZM63 59 aa6.29□□□□□ -1.4
SHMT2-215ENST00000554656 TMEM256-PLSCR3K7ERE1 68 aa6.28□□□□□ -1.4
SHMT2-215ENST00000554656 PPDPFLQ8WWR9 84 aa6.27□□□□□ -1.41
SHMT2-215ENST00000554656 J3QR89 54 aa6.26□□□□□ -1.41
SHMT2-215ENST00000554656 K7ERU9 68 aa6.26□□□□□ -1.41
SHMT2-215ENST00000554656 Q6ZQY7 126 aa6.26□□□□□ -1.41
SHMT2-215ENST00000554656 ZNF861PO60384 105 aa6.25□□□□□ -1.41
SHMT2-215ENST00000554656 PRR4Q16378 134 aa6.25□□□□□ -1.41
SHMT2-215ENST00000554656 A0A087X002 238 aa6.24□□□□□ -1.41
SHMT2-215ENST00000554656 JMJD7-PLA2G4BH0Y9G9 81 aa6.24□□□□□ -1.41
SHMT2-215ENST00000554656 BCE1O60756 84 aa6.24□□□□□ -1.41
SHMT2-215ENST00000554656 FAM19A1Q7Z5A9 133 aa6.24□□□□□ -1.41
SHMT2-215ENST00000554656 Q9BRP9 147 aa6.24□□□□□ -1.41
SHMT2-215ENST00000554656 OBSCN-AS1Q96MR7 158 aa6.23□□□□□ -1.41
SHMT2-215ENST00000554656 MUC2Q02817 5179 aa6.23□□□□□ -1.41
SHMT2-215ENST00000554656 IGLV5-48A0A075B6I7 105 aa6.22□□□□□ -1.41
SHMT2-215ENST00000554656 C21orf62-AS1Q17RA5 79 aa6.22□□□□□ -1.41
SHMT2-215ENST00000554656 TEX49A0A1B0GTD5 131 aa6.21□□□□□ -1.42
SHMT2-215ENST00000554656 KRTAP13-1Q8IUC0 172 aa6.21□□□□□ -1.42
SHMT2-215ENST00000554656 SMCR5Q8TEV8 140 aa6.21□□□□□ -1.42
SHMT2-215ENST00000554656 UBE2AP49459 152 aa6.2□□□□□ -1.42
SHMT2-215ENST00000554656 LINC01547P58512 204 aaPredicted RBP6.19□□□□□ -1.42
SHMT2-215ENST00000554656 PRLHP81277 87 aa6.19□□□□□ -1.42
SHMT2-215ENST00000554656 KRTAP13-2Q52LG2 175 aa6.19□□□□□ -1.42
SHMT2-215ENST00000554656 ANAPC11Q9NYG5 84 aa6.19□□□□□ -1.42
SHMT2-215ENST00000554656 PDE6GP18545 87 aa6.18□□□□□ -1.42
SHMT2-215ENST00000554656 LAMTOR3Q9UHA4 124 aa6.18□□□□□ -1.42
SHMT2-215ENST00000554656 FAM240AA0A1B0GVK7 77 aa6.17□□□□□ -1.42
SHMT2-215ENST00000554656 ERC2-IT1O76042 136 aa6.17□□□□□ -1.42
SHMT2-215ENST00000554656 SPRR1BP22528 89 aa6.17□□□□□ -1.42
SHMT2-215ENST00000554656 NDUFV3P56181 108 aaKnown RBP6.17□□□□□ -1.42
SHMT2-215ENST00000554656 RBM3P98179 157 aaKnown RBP6.17□□□□□ -1.42
SHMT2-215ENST00000554656 Q8N377 158 aa6.17□□□□□ -1.42
SHMT2-215ENST00000554656 HIGD2AQ9BW72 106 aa6.17□□□□□ -1.42
SHMT2-215ENST00000554656 ACYP1P07311 99 aa6.16□□□□□ -1.42
SHMT2-215ENST00000554656 CRYGAP11844 174 aa6.16□□□□□ -1.42
SHMT2-215ENST00000554656 TYMSOSQ8TAI1 123 aa6.16□□□□□ -1.42
SHMT2-215ENST00000554656 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.42
SHMT2-215ENST00000554656 ZNF706Q9Y5V0 76 aaPredicted RBP6.15□□□□□ -1.42
SHMT2-215ENST00000554656 TRBV7-4A0A0J9YYF1 115 aa6.14□□□□□ -1.43
SHMT2-215ENST00000554656 ST20-AS1Q8NBB2 130 aa6.14□□□□□ -1.43
SHMT2-215ENST00000554656 RETNLBQ9BQ08 111 aa6.14□□□□□ -1.43
SHMT2-215ENST00000554656 C14orf132Q9NPU4 83 aa6.14□□□□□ -1.43
SHMT2-215ENST00000554656 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
SHMT2-215ENST00000554656 DSCR8Q96T75 97 aa6.13□□□□□ -1.43
SHMT2-215ENST00000554656 CCKP06307 115 aa6.12□□□□□ -1.43
SHMT2-215ENST00000554656 DEFB105AQ8NG35 78 aa6.12□□□□□ -1.43
SHMT2-215ENST00000554656 IGLV8-61A0A075B6I0 122 aa6.11□□□□□ -1.43
SHMT2-215ENST00000554656 A0A1B0GW54 56 aa6.11□□□□□ -1.43
SHMT2-215ENST00000554656 F8WEM9 126 aa6.11□□□□□ -1.43
SHMT2-215ENST00000554656 FAM229BQ4G0N7 80 aa6.11□□□□□ -1.43
SHMT2-215ENST00000554656 Q6ZQT0 140 aa6.11□□□□□ -1.43
SHMT2-215ENST00000554656 SMIM29Q86T20 159 aa6.11□□□□□ -1.43
SHMT2-215ENST00000554656 KRTAP9-2Q9BYQ4 174 aa6.11□□□□□ -1.43
SHMT2-215ENST00000554656 LINC00483Q53H64 154 aa6.1□□□□□ -1.43
SHMT2-215ENST00000554656 LINC00304Q8N9R0 145 aa6.1□□□□□ -1.43
SHMT2-215ENST00000554656 SPRR4Q96PI1 79 aa6.1□□□□□ -1.43
SHMT2-215ENST00000554656 A0A0U1RQV1 116 aa6.09□□□□□ -1.43
SHMT2-215ENST00000554656 GAGE2AQ6NT46 116 aa6.09□□□□□ -1.43
SHMT2-215ENST00000554656 Q6JHZ5 121 aa6.08□□□□□ -1.44
SHMT2-215ENST00000554656 C3orf22Q8N5N4 141 aa6.08□□□□□ -1.44
SHMT2-215ENST00000554656 FAT4Q6V0I7 4981 aa6.07□□□□□ -1.44
SHMT2-215ENST00000554656 TPRXLQ17RH7 258 aa6.07□□□□□ -1.44
SHMT2-215ENST00000554656 VPS25Q9BRG1 176 aa6.07□□□□□ -1.44
SHMT2-215ENST00000554656 A0A1B0GV72 72 aa6.06□□□□□ -1.44
SHMT2-215ENST00000554656 CDIP1Q9H305 208 aa6.06□□□□□ -1.44
SHMT2-215ENST00000554656 MUC17Q685J3 4493 aa6.06□□□□□ -1.44
SHMT2-215ENST00000554656 IGLV7-46A0A075B6I9 117 aa6.04□□□□□ -1.44
SHMT2-215ENST00000554656 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
SHMT2-215ENST00000554656 Q8NBF4 154 aa6.04□□□□□ -1.44
SHMT2-215ENST00000554656 Q6Q795 121 aa6.03□□□□□ -1.44
SHMT2-215ENST00000554656 IGFL1Q6UW32 110 aa6.02□□□□□ -1.45
SHMT2-215ENST00000554656 LINC00643Q86TS7 51 aa6.02□□□□□ -1.45
SHMT2-215ENST00000554656 A0A1W2PNM2 257 aa6.01□□□□□ -1.45
SHMT2-215ENST00000554656 UBL5Q9BZL1 73 aa6.01□□□□□ -1.45
SHMT2-215ENST00000554656 LINC00846Q9NV44 126 aa6.01□□□□□ -1.45
SHMT2-215ENST00000554656 SIGMAR1Q99720 223 aa6□□□□□ -1.45
SHMT2-215ENST00000554656 TRBV7-7A0A0K0K1E9 115 aa5.99□□□□□ -1.45
SHMT2-215ENST00000554656 ATP5EP2Q5VTU8 51 aa5.99□□□□□ -1.45
SHMT2-215ENST00000554656 SSBP3-AS1Q7Z2R9 100 aa5.99□□□□□ -1.45
SHMT2-215ENST00000554656 C9orf153Q5TBE3 101 aa5.98□□□□□ -1.45
SHMT2-215ENST00000554656 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
SHMT2-215ENST00000554656 IMUPQ9GZP8 106 aa5.97□□□□□ -1.45
SHMT2-215ENST00000554656 IGLV9-49A0A0B4J1Y8 123 aa5.96□□□□□ -1.46
SHMT2-215ENST00000554656 CD164Q04900 197 aa5.96□□□□□ -1.46
SHMT2-215ENST00000554656 SPAG11AQ6PDA7 123 aa5.96□□□□□ -1.46
SHMT2-215ENST00000554656 Q6ZVQ6 151 aa5.96□□□□□ -1.46
SHMT2-215ENST00000554656 KRTAP4-1Q9BYQ7 146 aa5.96□□□□□ -1.46
SHMT2-215ENST00000554656 MT-ATP8P03928 68 aa5.95□□□□□ -1.46
SHMT2-215ENST00000554656 MOBPQ13875 183 aa5.95□□□□□ -1.46
SHMT2-215ENST00000554656 NREPQ16612 68 aa5.95□□□□□ -1.46
SHMT2-215ENST00000554656 FP248Q71RG6 208 aaPredicted RBP5.95□□□□□ -1.46
SHMT2-215ENST00000554656 CXCL6P80162 114 aa5.93□□□□□ -1.46
SHMT2-215ENST00000554656 SS18L2Q9UHA2 77 aa5.93□□□□□ -1.46
SHMT2-215ENST00000554656 ASB16-AS1Q495Z4 193 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms