RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 Q6JHZ5 121 aa9.99□□□□□ -0.81
CPSF2-203ENST00000554290 hADV29S1A0JD25 119 aa9.98□□□□□ -0.81
CPSF2-203ENST00000554290 Q6ZQY7 126 aa9.98□□□□□ -0.81
CPSF2-203ENST00000554290 HSBP1L1C9JCN9 74 aa9.97□□□□□ -0.81
CPSF2-203ENST00000554290 COX6B2Q6YFQ2 88 aa9.97□□□□□ -0.81
CPSF2-203ENST00000554290 M0R2T5 61 aa9.95□□□□□ -0.82
CPSF2-203ENST00000554290 CLEC2BQ92478 149 aa9.95□□□□□ -0.82
CPSF2-203ENST00000554290 TRBV7-7A0A0K0K1E9 115 aa9.93□□□□□ -0.82
CPSF2-203ENST00000554290 LORP23490 312 aaPredicted RBP9.93□□□□□ -0.82
CPSF2-203ENST00000554290 S100A2P29034 98 aa9.93□□□□□ -0.82
CPSF2-203ENST00000554290 KRTAP10-6P60371 365 aaPredicted RBP9.93□□□□□ -0.82
CPSF2-203ENST00000554290 OCIAD2Q56VL3 154 aa9.93□□□□□ -0.82
CPSF2-203ENST00000554290 IGFL1Q6UW32 110 aa9.92□□□□□ -0.82
CPSF2-203ENST00000554290 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.91□□□□□ -0.82
CPSF2-203ENST00000554290 HIST3H2BBQ8N257 126 aa9.91□□□□□ -0.82
CPSF2-203ENST00000554290 HIST1H2BLQ99880 126 aa9.91□□□□□ -0.82
CPSF2-203ENST00000554290 BVES-AS1Q5T3Y7 98 aa9.9□□□□□ -0.82
CPSF2-203ENST00000554290 PPDPFLQ8WWR9 84 aa9.9□□□□□ -0.82
CPSF2-203ENST00000554290 FSIP2Q5CZC0 6907 aa9.88□□□□□ -0.83
CPSF2-203ENST00000554290 SNHG12Q9BXW3 62 aa9.88□□□□□ -0.83
CPSF2-203ENST00000554290 ATP11AUNQ6ZP68 121 aa9.87□□□□□ -0.83
CPSF2-203ENST00000554290 SCGB1D1O95968 90 aa9.86□□□□□ -0.83
CPSF2-203ENST00000554290 OBSCN-AS1Q96MR7 158 aa9.86□□□□□ -0.83
CPSF2-203ENST00000554290 HIST1H4GQ99525 98 aa9.86□□□□□ -0.83
CPSF2-203ENST00000554290 C12orf57Q99622 126 aa9.85□□□□□ -0.83
CPSF2-203ENST00000554290 Q75L30 129 aa9.84□□□□□ -0.83
CPSF2-203ENST00000554290 LST1O00453 97 aa9.83□□□□□ -0.84
CPSF2-203ENST00000554290 SNCGO76070 127 aa9.81□□□□□ -0.84
CPSF2-203ENST00000554290 S100A6P06703 90 aa9.81□□□□□ -0.84
CPSF2-203ENST00000554290 H3BUT2 72 aa9.8□□□□□ -0.84
CPSF2-203ENST00000554290 Q6Q795 121 aa9.79□□□□□ -0.84
CPSF2-203ENST00000554290 SS18L2Q9UHA2 77 aa9.79□□□□□ -0.84
CPSF2-203ENST00000554290 COX8AP10176 69 aa9.77□□□□□ -0.85
CPSF2-203ENST00000554290 Q96NJ1 140 aa9.77□□□□□ -0.85
CPSF2-203ENST00000554290 H0YGX0 51 aa9.75□□□□□ -0.85
CPSF2-203ENST00000554290 DLEU1O43261 78 aa9.75□□□□□ -0.85
CPSF2-203ENST00000554290 RAB37Q96AX2 223 aa9.75□□□□□ -0.85
CPSF2-203ENST00000554290 CFC1P0CG37 223 aa9.74□□□□□ -0.85
CPSF2-203ENST00000554290 TEN1Q86WV5 123 aa9.74□□□□□ -0.85
CPSF2-203ENST00000554290 NDUFV3P56181 108 aaKnown RBP9.72□□□□□ -0.85
CPSF2-203ENST00000554290 GHRHP01286 108 aa9.7□□□□□ -0.86
CPSF2-203ENST00000554290 C20orf166-AS1Q96NR2 134 aa9.69□□□□□ -0.86
CPSF2-203ENST00000554290 A0A0B4J2C4 111 aa9.68□□□□□ -0.86
CPSF2-203ENST00000554290 S100A1P23297 94 aa9.68□□□□□ -0.86
CPSF2-203ENST00000554290 C14orf144Q96I85 54 aa9.68□□□□□ -0.86
CPSF2-203ENST00000554290 HIGD1BQ9P298 99 aa9.68□□□□□ -0.86
CPSF2-203ENST00000554290 A0A087WSZ3 146 aa9.67□□□□□ -0.86
CPSF2-203ENST00000554290 H3BMG7 143 aa9.67□□□□□ -0.86
CPSF2-203ENST00000554290 FAM218AQ96MZ4 157 aa9.67□□□□□ -0.86
CPSF2-203ENST00000554290 FLGP20930 4061 aaPredicted RBP9.66□□□□□ -0.86
CPSF2-203ENST00000554290 A8MUU9 505 aa9.66□□□□□ -0.86
CPSF2-203ENST00000554290 TRBV20-1A0A075B6N2 111 aa9.64□□□□□ -0.87
CPSF2-203ENST00000554290 A0A1B0GX51 115 aa9.64□□□□□ -0.87
CPSF2-203ENST00000554290 FABP2P12104 132 aa9.64□□□□□ -0.87
CPSF2-203ENST00000554290 SPATA45Q537H7 98 aa9.62□□□□□ -0.87
CPSF2-203ENST00000554290 PAM16Q9Y3D7 125 aa9.62□□□□□ -0.87
CPSF2-203ENST00000554290 PRO1854Q9UHT4 67 aa9.61□□□□□ -0.87
CPSF2-203ENST00000554290 TMEM238LA0A1B0GVL6 79 aa9.6□□□□□ -0.87
CPSF2-203ENST00000554290 A6NJY4 79 aa9.6□□□□□ -0.87
CPSF2-203ENST00000554290 DSCR10P59022 87 aa9.59□□□□□ -0.87
CPSF2-203ENST00000554290 C2orf91Q6ZV80 131 aa9.59□□□□□ -0.87
CPSF2-203ENST00000554290 CEND1Q8N111 149 aa9.59□□□□□ -0.87
CPSF2-203ENST00000554290 SIGMAR1Q99720 223 aa9.58□□□□□ -0.88
CPSF2-203ENST00000554290 VAMP8Q9BV40 100 aa9.58□□□□□ -0.88
CPSF2-203ENST00000554290 A0A1W2PNM2 257 aa9.56□□□□□ -0.88
CPSF2-203ENST00000554290 LINC00313P59037 77 aa9.55□□□□□ -0.88
CPSF2-203ENST00000554290 TRIAP1O43715 76 aa9.53□□□□□ -0.88
CPSF2-203ENST00000554290 ANKRD29Q8N6D5 301 aa9.53□□□□□ -0.88
CPSF2-203ENST00000554290 TRBV7-4A0A0J9YYF1 115 aa9.52□□□□□ -0.89
CPSF2-203ENST00000554290 H3BQ85 93 aa9.52□□□□□ -0.89
CPSF2-203ENST00000554290 DNAL4O96015 105 aa9.52□□□□□ -0.89
CPSF2-203ENST00000554290 IGKV4-1P06312 121 aa9.52□□□□□ -0.89
CPSF2-203ENST00000554290 FXYD2P54710 66 aa9.51□□□□□ -0.89
CPSF2-203ENST00000554290 KRTAP9-8Q9BYQ0 159 aa9.51□□□□□ -0.89
CPSF2-203ENST00000554290 ORMDL1Q9P0S3 153 aa9.5□□□□□ -0.89
CPSF2-203ENST00000554290 FAM236DA0A1B0GTK5 79 aa9.48□□□□□ -0.89
CPSF2-203ENST00000554290 FAM236CP0DP71 79 aa9.48□□□□□ -0.89
CPSF2-203ENST00000554290 PSMB2P49721 201 aa9.47□□□□□ -0.89
CPSF2-203ENST00000554290 A0A1B0GV72 72 aa9.46□□□□□ -0.9
CPSF2-203ENST00000554290 KRTAP16-1A8MUX0 517 aa9.46□□□□□ -0.9
CPSF2-203ENST00000554290 TMEM256-PLSCR3K7ERE1 68 aa9.46□□□□□ -0.9
CPSF2-203ENST00000554290 COX6CP09669 75 aa9.45□□□□□ -0.9
CPSF2-203ENST00000554290 SMCPP49901 116 aaPredicted RBP9.44□□□□□ -0.9
CPSF2-203ENST00000554290 RBM12B-AS1Q9P1G2 102 aa9.44□□□□□ -0.9
CPSF2-203ENST00000554290 TRACP01848 142 aa9.43□□□□□ -0.9
CPSF2-203ENST00000554290 CCKP06307 115 aa9.43□□□□□ -0.9
CPSF2-203ENST00000554290 DEFB116Q30KQ4 102 aa9.43□□□□□ -0.9
CPSF2-203ENST00000554290 NOTCH2NLQ7Z3S9 236 aa9.42□□□□□ -0.9
CPSF2-203ENST00000554290 LINC00472Q9H8W2 130 aa9.42□□□□□ -0.9
CPSF2-203ENST00000554290 LCE2BO14633 110 aa9.41□□□□□ -0.9
CPSF2-203ENST00000554290 HSD52Q0P140 79 aa9.41□□□□□ -0.9
CPSF2-203ENST00000554290 IGHV6-1A0A0B4J1U7 121 aa9.4□□□□□ -0.9
CPSF2-203ENST00000554290 K7ERJ3 54 aa9.39□□□□□ -0.91
CPSF2-203ENST00000554290 UBE2V1Q13404 147 aa9.38□□□□□ -0.91
CPSF2-203ENST00000554290 MPLKIPQ8TAP9 179 aa9.38□□□□□ -0.91
CPSF2-203ENST00000554290 HRES1P13985 223 aa9.37□□□□□ -0.91
CPSF2-203ENST00000554290 MT2AP02795 61 aa9.36□□□□□ -0.91
CPSF2-203ENST00000554290 C8orf87E5RJ46 101 aa9.34□□□□□ -0.91
CPSF2-203ENST00000554290 VPS25Q9BRG1 176 aa9.34□□□□□ -0.91
CPSF2-203ENST00000554290 A0A1B0GVX0 72 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms