RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 C3orf22Q8N5N4 141 aa3.95□□□□□ -1.78
LINC00517-202ENST00000554257 TEX49A0A1B0GTD5 131 aa3.94□□□□□ -1.78
LINC00517-202ENST00000554257 KRTAP29-1A8MX34 341 aaPredicted RBP3.94□□□□□ -1.78
LINC00517-202ENST00000554257 COX6CP09669 75 aa3.94□□□□□ -1.78
LINC00517-202ENST00000554257 OCIAD2Q56VL3 154 aa3.94□□□□□ -1.78
LINC00517-202ENST00000554257 UBE2V1Q13404 147 aa3.93□□□□□ -1.78
LINC00517-202ENST00000554257 ZNF706Q9Y5V0 76 aaPredicted RBP3.93□□□□□ -1.78
LINC00517-202ENST00000554257 TRBV7-4A0A0J9YYF1 115 aa3.92□□□□□ -1.78
LINC00517-202ENST00000554257 H3BT86 120 aa3.92□□□□□ -1.78
LINC00517-202ENST00000554257 LYRM7Q5U5X0 104 aa3.92□□□□□ -1.78
LINC00517-202ENST00000554257 ORMDL1Q9P0S3 153 aa3.92□□□□□ -1.78
LINC00517-202ENST00000554257 HERC1Q15751 4861 aa3.92□□□□□ -1.78
LINC00517-202ENST00000554257 SCGB1C2P0DMR2 95 aa3.92□□□□□ -1.78
LINC00517-202ENST00000554257 MTURNQ8N3F0 131 aa3.92□□□□□ -1.78
LINC00517-202ENST00000554257 GAGE2AQ6NT46 116 aa3.91□□□□□ -1.78
LINC00517-202ENST00000554257 PRR26Q8N8Z3 221 aa3.91□□□□□ -1.78
LINC00517-202ENST00000554257 C9JAW5 83 aa3.91□□□□□ -1.78
LINC00517-202ENST00000554257 H3BQ85 93 aa3.91□□□□□ -1.78
LINC00517-202ENST00000554257 SLC25A20O43772 301 aa3.91□□□□□ -1.78
LINC00517-202ENST00000554257 NDUFV3P56181 108 aaKnown RBP3.91□□□□□ -1.78
LINC00517-202ENST00000554257 Q6Q795 121 aa3.91□□□□□ -1.78
LINC00517-202ENST00000554257 TMEM256-PLSCR3K7ERE1 68 aa3.9□□□□□ -1.78
LINC00517-202ENST00000554257 OXTP01178 125 aa3.9□□□□□ -1.78
LINC00517-202ENST00000554257 BAALC-AS2P0C853 105 aa3.9□□□□□ -1.78
LINC00517-202ENST00000554257 IGFL1Q6UW32 110 aa3.9□□□□□ -1.78
LINC00517-202ENST00000554257 HMCN2Q8NDA2 5059 aa3.9□□□□□ -1.78
LINC00517-202ENST00000554257 A0A0G2JQZ4 141 aa3.9□□□□□ -1.79
LINC00517-202ENST00000554257 ANKRD29Q8N6D5 301 aa3.9□□□□□ -1.79
LINC00517-202ENST00000554257 LOC110117498A0A087WWA1 95 aa3.89□□□□□ -1.79
LINC00517-202ENST00000554257 DEFB105AQ8NG35 78 aa3.89□□□□□ -1.79
LINC00517-202ENST00000554257 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
LINC00517-202ENST00000554257 F8W1H4 67 aa3.89□□□□□ -1.79
LINC00517-202ENST00000554257 Q8NBF4 154 aa3.89□□□□□ -1.79
LINC00517-202ENST00000554257 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
LINC00517-202ENST00000554257 LPAP08519 4548 aa3.89□□□□□ -1.79
LINC00517-202ENST00000554257 FLG2Q5D862 2391 aaPredicted RBP3.89□□□□□ -1.79
LINC00517-202ENST00000554257 MUC17Q685J3 4493 aa3.89□□□□□ -1.79
LINC00517-202ENST00000554257 A0A1W2PNM2 257 aa3.89□□□□□ -1.79
LINC00517-202ENST00000554257 Q6ZQT0 140 aa3.88□□□□□ -1.79
LINC00517-202ENST00000554257 GTF2H5Q6ZYL4 71 aa3.88□□□□□ -1.79
LINC00517-202ENST00000554257 MOBPQ13875 183 aa3.88□□□□□ -1.79
LINC00517-202ENST00000554257 CRYGAP11844 174 aa3.87□□□□□ -1.79
LINC00517-202ENST00000554257 Q5XG85 94 aa3.87□□□□□ -1.79
LINC00517-202ENST00000554257 DNAL4O96015 105 aa3.87□□□□□ -1.79
LINC00517-202ENST00000554257 RPS29P62273 56 aaKnown RBP3.87□□□□□ -1.79
LINC00517-202ENST00000554257 SSBP3-AS1Q7Z2R9 100 aa3.87□□□□□ -1.79
LINC00517-202ENST00000554257 CD164Q04900 197 aa3.87□□□□□ -1.79
LINC00517-202ENST00000554257 Q96NJ1 140 aa3.87□□□□□ -1.79
LINC00517-202ENST00000554257 LAMTOR3Q9UHA4 124 aa3.86□□□□□ -1.79
LINC00517-202ENST00000554257 IGLV9-49A0A0B4J1Y8 123 aa3.86□□□□□ -1.79
LINC00517-202ENST00000554257 ASB16-AS1Q495Z4 193 aa3.85□□□□□ -1.79
LINC00517-202ENST00000554257 TEN1Q86WV5 123 aa3.85□□□□□ -1.79
LINC00517-202ENST00000554257 Q6JHZ5 121 aa3.85□□□□□ -1.79
LINC00517-202ENST00000554257 TYMSOSQ8TAI1 123 aa3.85□□□□□ -1.79
LINC00517-202ENST00000554257 TRBV7-7A0A0K0K1E9 115 aa3.84□□□□□ -1.8
LINC00517-202ENST00000554257 JMJD7-PLA2G4BH0Y9G9 81 aa3.84□□□□□ -1.8
LINC00517-202ENST00000554257 SNCGO76070 127 aa3.83□□□□□ -1.8
LINC00517-202ENST00000554257 C14orf132Q9NPU4 83 aa3.83□□□□□ -1.8
LINC00517-202ENST00000554257 GHRHP01286 108 aa3.83□□□□□ -1.8
LINC00517-202ENST00000554257 RBM3P98179 157 aaKnown RBP3.83□□□□□ -1.8
LINC00517-202ENST00000554257 CCKP06307 115 aa3.82□□□□□ -1.8
LINC00517-202ENST00000554257 ETDBQ3ZM63 59 aa3.82□□□□□ -1.8
LINC00517-202ENST00000554257 KRTAP3-3Q9BYR6 98 aa3.82□□□□□ -1.8
LINC00517-202ENST00000554257 KRTAP3-2Q9BYR7 98 aa3.82□□□□□ -1.8
LINC00517-202ENST00000554257 C9orf153Q5TBE3 101 aa3.82□□□□□ -1.8
LINC00517-202ENST00000554257 LINC00304Q8N9R0 145 aa3.82□□□□□ -1.8
LINC00517-202ENST00000554257 SPINK1P00995 79 aa3.8□□□□□ -1.8
LINC00517-202ENST00000554257 A0A1B0GV72 72 aa3.8□□□□□ -1.8
LINC00517-202ENST00000554257 LINC00472Q9H8W2 130 aa3.8□□□□□ -1.8
LINC00517-202ENST00000554257 A0A1B0GW54 56 aa3.8□□□□□ -1.8
LINC00517-202ENST00000554257 SPAG11AQ6PDA7 123 aa3.79□□□□□ -1.8
LINC00517-202ENST00000554257 F8WEM9 126 aa3.79□□□□□ -1.8
LINC00517-202ENST00000554257 PDE6GP18545 87 aa3.79□□□□□ -1.8
LINC00517-202ENST00000554257 C1orf195Q5TG92 126 aa3.78□□□□□ -1.8
LINC00517-202ENST00000554257 DSCR8Q96T75 97 aa3.78□□□□□ -1.8
LINC00517-202ENST00000554257 FAM240AA0A1B0GVK7 77 aa3.78□□□□□ -1.81
LINC00517-202ENST00000554257 LRP2P98164 4655 aa3.78□□□□□ -1.81
LINC00517-202ENST00000554257 C21orf62-AS1Q17RA5 79 aa3.77□□□□□ -1.81
LINC00517-202ENST00000554257 HRCT1Q6UXD1 115 aa3.77□□□□□ -1.81
LINC00517-202ENST00000554257 LINC00846Q9NV44 126 aa3.77□□□□□ -1.81
LINC00517-202ENST00000554257 A0A087WSZ3 146 aa3.75□□□□□ -1.81
LINC00517-202ENST00000554257 CDIP1Q9H305 208 aa3.75□□□□□ -1.81
LINC00517-202ENST00000554257 DSCR10P59022 87 aa3.74□□□□□ -1.81
LINC00517-202ENST00000554257 Q6ZVQ6 151 aa3.74□□□□□ -1.81
LINC00517-202ENST00000554257 KRTAP16-1A8MUX0 517 aa3.73□□□□□ -1.81
LINC00517-202ENST00000554257 LIMD2Q9BT23 127 aa3.73□□□□□ -1.81
LINC00517-202ENST00000554257 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
LINC00517-202ENST00000554257 RETNLBQ9BQ08 111 aa3.72□□□□□ -1.81
LINC00517-202ENST00000554257 FP248Q71RG6 208 aaPredicted RBP3.72□□□□□ -1.81
LINC00517-202ENST00000554257 ACYP1P07311 99 aa3.71□□□□□ -1.82
LINC00517-202ENST00000554257 NOTCH2NLQ7Z3S9 236 aa3.71□□□□□ -1.82
LINC00517-202ENST00000554257 J3QL48 77 aa3.7□□□□□ -1.82
LINC00517-202ENST00000554257 TPRXLQ17RH7 258 aa3.7□□□□□ -1.82
LINC00517-202ENST00000554257 SS18L2Q9UHA2 77 aa3.7□□□□□ -1.82
LINC00517-202ENST00000554257 VPS25Q9BRG1 176 aa3.69□□□□□ -1.82
LINC00517-202ENST00000554257 IGKV3D-7A0A0C4DH55 119 aa3.69□□□□□ -1.82
LINC00517-202ENST00000554257 C4orf48Q5BLP8 95 aa3.69□□□□□ -1.82
LINC00517-202ENST00000554257 DEFB116Q30KQ4 102 aa3.68□□□□□ -1.82
LINC00517-202ENST00000554257 IGKV4-1P06312 121 aa3.68□□□□□ -1.82
LINC00517-202ENST00000554257 A8MWP4 228 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms