RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 Q6YL49 198 aa5.99□□□□□ -1.45
SIX4-202ENST00000554079 RETNLBQ9BQ08 111 aa5.99□□□□□ -1.45
SIX4-202ENST00000554079 A0A087WSZ3 146 aa5.98□□□□□ -1.45
SIX4-202ENST00000554079 POLQO75417 2590 aa5.97□□□□□ -1.45
SIX4-202ENST00000554079 LELP1Q5T871 98 aa5.97□□□□□ -1.45
SIX4-202ENST00000554079 KRTAP26-1Q6PEX3 210 aa5.97□□□□□ -1.45
SIX4-202ENST00000554079 Q6ZR54 194 aa5.97□□□□□ -1.45
SIX4-202ENST00000554079 C15orf56Q8N910 161 aa5.97□□□□□ -1.45
SIX4-202ENST00000554079 CSAG1Q6PB30 78 aa5.96□□□□□ -1.45
SIX4-202ENST00000554079 MMP24-AS1A0A0U1RRL7 71 aa5.96□□□□□ -1.46
SIX4-202ENST00000554079 A8MWP4 228 aa5.96□□□□□ -1.46
SIX4-202ENST00000554079 X6R8D5 127 aa5.96□□□□□ -1.46
SIX4-202ENST00000554079 JMJD1CQ15652 2540 aa5.95□□□□□ -1.46
SIX4-202ENST00000554079 TLN2Q9Y4G6 2542 aa5.95□□□□□ -1.46
SIX4-202ENST00000554079 IGLV8-61A0A075B6I0 122 aa5.94□□□□□ -1.46
SIX4-202ENST00000554079 CCDC168Q8NDH2 2452 aa5.94□□□□□ -1.46
SIX4-202ENST00000554079 MYO9AB2RTY4 2548 aa5.94□□□□□ -1.46
SIX4-202ENST00000554079 SPATA8Q6RVD6 105 aa5.94□□□□□ -1.46
SIX4-202ENST00000554079 RPL37AP8A6NKH3 93 aa5.93□□□□□ -1.46
SIX4-202ENST00000554079 H0Y9J4 135 aa5.93□□□□□ -1.46
SIX4-202ENST00000554079 LCE2DQ5TA82 110 aaPredicted RBP5.93□□□□□ -1.46
SIX4-202ENST00000554079 DEFB131BA0A096LNP1 70 aa5.92□□□□□ -1.46
SIX4-202ENST00000554079 KRTAP1-3Q8IUG1 177 aa5.92□□□□□ -1.46
SIX4-202ENST00000554079 PLA2G2DQ9UNK4 145 aa5.92□□□□□ -1.46
SIX4-202ENST00000554079 IGKV2-24A0A0C4DH68 120 aa5.92□□□□□ -1.46
SIX4-202ENST00000554079 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
SIX4-202ENST00000554079 ZNF469Q96JG9 3925 aaPredicted RBP5.91□□□□□ -1.46
SIX4-202ENST00000554079 ITPR3Q14573 2671 aa5.91□□□□□ -1.46
SIX4-202ENST00000554079 ZNF706Q9Y5V0 76 aaPredicted RBP5.91□□□□□ -1.46
SIX4-202ENST00000554079 TENM2Q9NT68 2774 aa5.9□□□□□ -1.46
SIX4-202ENST00000554079 MXRA5Q9NR99 2828 aa5.9□□□□□ -1.47
SIX4-202ENST00000554079 FN1P02751 2386 aaKnown RBP5.88□□□□□ -1.47
SIX4-202ENST00000554079 HIVEP1P15822 2718 aa5.88□□□□□ -1.47
SIX4-202ENST00000554079 CUBNO60494 3623 aa5.88□□□□□ -1.47
SIX4-202ENST00000554079 TP53AIP1Q9HCN2 124 aa5.88□□□□□ -1.47
SIX4-202ENST00000554079 NF1P21359 2839 aa5.88□□□□□ -1.47
SIX4-202ENST00000554079 FAM168BA1KXE4 195 aa5.87□□□□□ -1.47
SIX4-202ENST00000554079 C1orf134Q5TEV5 83 aa5.87□□□□□ -1.47
SIX4-202ENST00000554079 KRTAP7-1Q8IUC3 87 aa5.87□□□□□ -1.47
SIX4-202ENST00000554079 MAPK1IP1LQ8NDC0 245 aa5.87□□□□□ -1.47
SIX4-202ENST00000554079 SMR3AQ99954 134 aa5.87□□□□□ -1.47
SIX4-202ENST00000554079 F8P00451 2351 aa5.87□□□□□ -1.47
SIX4-202ENST00000554079 TLX1NBP0CAT3 122 aa5.86□□□□□ -1.47
SIX4-202ENST00000554079 FLNAP21333 2647 aaKnown RBP5.85□□□□□ -1.47
SIX4-202ENST00000554079 DEFB4AO15263 64 aa5.85□□□□□ -1.47
SIX4-202ENST00000554079 NIPBLQ6KC79 2804 aaeCLIP5.84□□□□□ -1.47
SIX4-202ENST00000554079 MIR22HGQ0VDD5 57 aa5.84□□□□□ -1.48
SIX4-202ENST00000554079 NBEAL2Q6ZNJ1 2754 aa5.83□□□□□ -1.48
SIX4-202ENST00000554079 ZNF861PO60384 105 aa5.82□□□□□ -1.48
SIX4-202ENST00000554079 ACANP16112 2415 aa5.82□□□□□ -1.48
SIX4-202ENST00000554079 ZANQ9Y493 2812 aa5.82□□□□□ -1.48
SIX4-202ENST00000554079 INAFM1C9JVW0 142 aa5.82□□□□□ -1.48
SIX4-202ENST00000554079 ROMO1P60602 79 aa5.82□□□□□ -1.48
SIX4-202ENST00000554079 KRTAP1-1Q07627 177 aa5.81□□□□□ -1.48
SIX4-202ENST00000554079 REG3GQ6UW15 175 aa5.81□□□□□ -1.48
SIX4-202ENST00000554079 TEP1Q99973 2627 aaKnown RBP5.81□□□□□ -1.48
SIX4-202ENST00000554079 A0A1B0GU69 56 aa5.81□□□□□ -1.48
SIX4-202ENST00000554079 HTN3P15516 51 aa5.8□□□□□ -1.48
SIX4-202ENST00000554079 HIVEP2P31629 2446 aa5.79□□□□□ -1.48
SIX4-202ENST00000554079 IGHV6-1A0A0B4J1U7 121 aa5.79□□□□□ -1.48
SIX4-202ENST00000554079 C8orf17Q9NRJ1 99 aa5.79□□□□□ -1.48
SIX4-202ENST00000554079 UQCR11O14957 56 aa5.78□□□□□ -1.48
SIX4-202ENST00000554079 KRTAP3-3Q9BYR6 98 aa5.78□□□□□ -1.48
SIX4-202ENST00000554079 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
SIX4-202ENST00000554079 ACYP2P14621 99 aa5.77□□□□□ -1.49
SIX4-202ENST00000554079 Q96NJ1 140 aa5.77□□□□□ -1.49
SIX4-202ENST00000554079 ANK3Q12955 4377 aaKnown RBP5.77□□□□□ -1.49
SIX4-202ENST00000554079 MTORP42345 2549 aa5.76□□□□□ -1.49
SIX4-202ENST00000554079 DEFB135Q30KP9 77 aa5.76□□□□□ -1.49
SIX4-202ENST00000554079 PRLHP81277 87 aa5.75□□□□□ -1.49
SIX4-202ENST00000554079 KRTAP21-3Q3LHN1 58 aa5.75□□□□□ -1.49
SIX4-202ENST00000554079 NSD1Q96L73 2696 aaPredicted RBP5.75□□□□□ -1.49
SIX4-202ENST00000554079 SETD2Q9BYW2 2564 aaPredicted RBP5.75□□□□□ -1.49
SIX4-202ENST00000554079 SPRR1BP22528 89 aa5.75□□□□□ -1.49
SIX4-202ENST00000554079 KRTAP25-1Q3LHN0 102 aa5.74□□□□□ -1.49
SIX4-202ENST00000554079 KRTAP13-3Q3SY46 172 aa5.74□□□□□ -1.49
SIX4-202ENST00000554079 DMAC1Q96GE9 116 aa5.74□□□□□ -1.49
SIX4-202ENST00000554079 K7EIL1 84 aa5.72□□□□□ -1.49
SIX4-202ENST00000554079 SPART-AS1P0CW21 52 aa5.72□□□□□ -1.49
SIX4-202ENST00000554079 MRPL34Q9BQ48 92 aaKnown RBP5.72□□□□□ -1.49
SIX4-202ENST00000554079 P0C880 135 aa5.71□□□□□ -1.5
SIX4-202ENST00000554079 SONP18583 2426 aaKnown RBP5.71□□□□□ -1.5
SIX4-202ENST00000554079 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
SIX4-202ENST00000554079 LINC01556Q5JQF7 62 aa5.69□□□□□ -1.5
SIX4-202ENST00000554079 Q5W150 140 aa5.69□□□□□ -1.5
SIX4-202ENST00000554079 IGLV5-52A0A0A0MRZ9 124 aa5.66□□□□□ -1.5
SIX4-202ENST00000554079 H3BNG1 76 aa5.66□□□□□ -1.5
SIX4-202ENST00000554079 CASC10Q5T4H9 136 aa5.65□□□□□ -1.5
SIX4-202ENST00000554079 NOTCH2NLQ7Z3S9 236 aa5.65□□□□□ -1.5
SIX4-202ENST00000554079 KRTAP24-1Q3LI83 254 aa5.65□□□□□ -1.51
SIX4-202ENST00000554079 A8MUU9 505 aa5.64□□□□□ -1.51
SIX4-202ENST00000554079 FBN1P35555 2871 aaKnown RBP5.64□□□□□ -1.51
SIX4-202ENST00000554079 A0A096LNI7 61 aa5.64□□□□□ -1.51
SIX4-202ENST00000554079 IGLV7-43P04211 117 aa5.64□□□□□ -1.51
SIX4-202ENST00000554079 DNAH1Q9P2D7 4330 aa5.62□□□□□ -1.51
SIX4-202ENST00000554079 KRTAP11-1Q8IUC1 163 aa5.62□□□□□ -1.51
SIX4-202ENST00000554079 A0A0A0MQY5 61 aa5.61□□□□□ -1.51
SIX4-202ENST00000554079 OXLD1Q5BKU9 147 aa5.61□□□□□ -1.51
SIX4-202ENST00000554079 ATRQ13535 2644 aa5.61□□□□□ -1.51
SIX4-202ENST00000554079 LINC00483Q53H64 154 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms