RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 HERV-K104P63124 156 aa1.51□□□□□ -2.17
SLIRP-202ENST00000553981 CD164Q04900 197 aa1.51□□□□□ -2.17
SLIRP-202ENST00000553981 KRTAP20-1Q3LI63 56 aa1.51□□□□□ -2.17
SLIRP-202ENST00000553981 DEFB105AQ8NG35 78 aa1.51□□□□□ -2.17
SLIRP-202ENST00000553981 YPEL4Q96NS1 127 aa1.51□□□□□ -2.17
SLIRP-202ENST00000553981 PMCHL2Q9BQD1 86 aa1.51□□□□□ -2.17
SLIRP-202ENST00000553981 TTTY13Q9BZ97 58 aa1.51□□□□□ -2.17
SLIRP-202ENST00000553981 NEBP20929 6669 aa1.51□□□□□ -2.17
SLIRP-202ENST00000553981 IGLV5-48A0A075B6I7 105 aa1.5□□□□□ -2.17
SLIRP-202ENST00000553981 A0A0J9YXY3 114 aa1.5□□□□□ -2.17
SLIRP-202ENST00000553981 TMEM218A2RU14 115 aa1.5□□□□□ -2.17
SLIRP-202ENST00000553981 A8MUU9 505 aa1.5□□□□□ -2.17
SLIRP-202ENST00000553981 LEPROTO15243 131 aa1.5□□□□□ -2.17
SLIRP-202ENST00000553981 G0S2P27469 103 aa1.5□□□□□ -2.17
SLIRP-202ENST00000553981 ELOF1P60002 83 aaKnown RBP1.5□□□□□ -2.17
SLIRP-202ENST00000553981 C10orf91Q5T1B1 145 aa1.5□□□□□ -2.17
SLIRP-202ENST00000553981 IFI27L1Q96BM0 104 aa1.5□□□□□ -2.17
SLIRP-202ENST00000553981 OBSCN-AS1Q96MR7 158 aa1.5□□□□□ -2.17
SLIRP-202ENST00000553981 C20orf166-AS1Q96NR2 134 aa1.5□□□□□ -2.17
SLIRP-202ENST00000553981 LIMD2Q9BT23 127 aa1.5□□□□□ -2.17
SLIRP-202ENST00000553981 SMCO4Q9NRQ5 59 aa1.5□□□□□ -2.17
SLIRP-202ENST00000553981 SPANXB1Q9NS25 103 aaPredicted RBP1.5□□□□□ -2.17
SLIRP-202ENST00000553981 MYMXA0A1B0GTQ4 84 aa1.49□□□□□ -2.17
SLIRP-202ENST00000553981 C20orf202A1L168 122 aa1.49□□□□□ -2.17
SLIRP-202ENST00000553981 LINC01549A6NIU2 74 aa1.49□□□□□ -2.17
SLIRP-202ENST00000553981 J3QQQ9 107 aa1.49□□□□□ -2.17
SLIRP-202ENST00000553981 C6orf99Q4VX62 202 aa1.49□□□□□ -2.17
SLIRP-202ENST00000553981 LINC00308Q8TCZ7 52 aa1.49□□□□□ -2.17
SLIRP-202ENST00000553981 Q96NJ1 140 aa1.49□□□□□ -2.17
SLIRP-202ENST00000553981 MAP1LC3CQ9BXW4 147 aa1.49□□□□□ -2.17
SLIRP-202ENST00000553981 PRO1933Q9H354 126 aa1.49□□□□□ -2.17
SLIRP-202ENST00000553981 LAMTOR3Q9UHA4 124 aa1.49□□□□□ -2.17
SLIRP-202ENST00000553981 TEX49A0A1B0GTD5 131 aa1.48□□□□□ -2.17
SLIRP-202ENST00000553981 H0Y8G0 127 aa1.48□□□□□ -2.17
SLIRP-202ENST00000553981 MT1BP07438 61 aa1.48□□□□□ -2.17
SLIRP-202ENST00000553981 AKR1D1P51857 326 aa1.48□□□□□ -2.17
SLIRP-202ENST00000553981 CLLU1Q5K131 121 aa1.48□□□□□ -2.17
SLIRP-202ENST00000553981 S100A7L2Q5SY68 101 aa1.48□□□□□ -2.17
SLIRP-202ENST00000553981 SFTA2Q6UW10 78 aa1.48□□□□□ -2.17
SLIRP-202ENST00000553981 IGFL1Q6UW32 110 aa1.48□□□□□ -2.17
SLIRP-202ENST00000553981 PCP2Q8IVA1 136 aa1.48□□□□□ -2.17
SLIRP-202ENST00000553981 LINC00518Q8N0U6 118 aa1.48□□□□□ -2.17
SLIRP-202ENST00000553981 TRAPPC1Q9Y5R8 145 aa1.48□□□□□ -2.17
SLIRP-202ENST00000553981 TRBV7-7A0A0K0K1E9 115 aa1.47□□□□□ -2.17
SLIRP-202ENST00000553981 ATP6V1G1O75348 118 aa1.47□□□□□ -2.17
SLIRP-202ENST00000553981 COX7BP24311 80 aa1.47□□□□□ -2.17
SLIRP-202ENST00000553981 CXCL6P80162 114 aa1.47□□□□□ -2.17
SLIRP-202ENST00000553981 JOSD1Q15040 202 aaPredicted RBP1.47□□□□□ -2.17
SLIRP-202ENST00000553981 TAL2Q16559 108 aa1.47□□□□□ -2.17
SLIRP-202ENST00000553981 ATP11AUNQ6ZP68 121 aa1.47□□□□□ -2.17
SLIRP-202ENST00000553981 SEC11CQ9BY50 192 aa1.47□□□□□ -2.17
SLIRP-202ENST00000553981 E9PLD3 99 aa1.46□□□□□ -2.18
SLIRP-202ENST00000553981 SERF1AO75920 110 aa1.46□□□□□ -2.18
SLIRP-202ENST00000553981 LGALS3P17931 250 aaKnown RBP1.46□□□□□ -2.18
SLIRP-202ENST00000553981 CEND1Q8N111 149 aa1.46□□□□□ -2.18
SLIRP-202ENST00000553981 OR13C6PQ8NH95 151 aa1.46□□□□□ -2.18
SLIRP-202ENST00000553981 SPANXCQ9NY87 97 aa1.46□□□□□ -2.18
SLIRP-202ENST00000553981 KMT2DO14686 5537 aa1.45□□□□□ -2.18
SLIRP-202ENST00000553981 A0A1B0GWB2 263 aa1.45□□□□□ -2.18
SLIRP-202ENST00000553981 LINC00587B1AMM8 73 aa1.45□□□□□ -2.18
SLIRP-202ENST00000553981 IGKCP01834 107 aa1.45□□□□□ -2.18
SLIRP-202ENST00000553981 FABP4P15090 132 aa1.45□□□□□ -2.18
SLIRP-202ENST00000553981 RHEBQ15382 184 aa1.45□□□□□ -2.18
SLIRP-202ENST00000553981 COX19Q49B96 90 aa1.45□□□□□ -2.18
SLIRP-202ENST00000553981 SMIM11BQ8TCY0 68 aa1.45□□□□□ -2.18
SLIRP-202ENST00000553981 CHCHD1Q96BP2 118 aaKnown RBP1.45□□□□□ -2.18
SLIRP-202ENST00000553981 H3BUT2 72 aa1.44□□□□□ -2.18
SLIRP-202ENST00000553981 DPM2O94777 84 aa1.44□□□□□ -2.18
SLIRP-202ENST00000553981 LEPROTL1O95214 131 aa1.44□□□□□ -2.18
SLIRP-202ENST00000553981 TRGC2P03986 189 aa1.44□□□□□ -2.18
SLIRP-202ENST00000553981 S100PP25815 95 aa1.44□□□□□ -2.18
SLIRP-202ENST00000553981 NMUP48645 174 aa1.44□□□□□ -2.18
SLIRP-202ENST00000553981 SLC25A34Q6PIV7 304 aa1.44□□□□□ -2.18
SLIRP-202ENST00000553981 UQCC3Q6UW78 93 aa1.44□□□□□ -2.18
SLIRP-202ENST00000553981 COMMD7Q86VX2 200 aa1.44□□□□□ -2.18
SLIRP-202ENST00000553981 MIEN1Q9BRT3 115 aa1.44□□□□□ -2.18
SLIRP-202ENST00000553981 SPANXDQ9BXN6 97 aa1.44□□□□□ -2.18
SLIRP-202ENST00000553981 TRBV7-6A0A0J9YX20 115 aa1.43□□□□□ -2.18
SLIRP-202ENST00000553981 TIMM17BO60830 172 aa1.43□□□□□ -2.18
SLIRP-202ENST00000553981 HSBP1O75506 76 aa1.43□□□□□ -2.18
SLIRP-202ENST00000553981 TCL1BO95988 128 aa1.43□□□□□ -2.18
SLIRP-202ENST00000553981 KRTAP2-3P0C7H8 128 aa1.43□□□□□ -2.18
SLIRP-202ENST00000553981 S100A12P80511 92 aa1.43□□□□□ -2.18
SLIRP-202ENST00000553981 LINC00575Q6W349 94 aa1.43□□□□□ -2.18
SLIRP-202ENST00000553981 MUSTN1Q8IVN3 82 aa1.43□□□□□ -2.18
SLIRP-202ENST00000553981 KRTAP2-4Q9BYR9 128 aa1.43□□□□□ -2.18
SLIRP-202ENST00000553981 MDN1Q9NU22 5596 aa1.43□□□□□ -2.18
SLIRP-202ENST00000553981 TRBV20-1A0A075B6N2 111 aa1.42□□□□□ -2.18
SLIRP-202ENST00000553981 FAM236DA0A1B0GTK5 79 aa1.42□□□□□ -2.18
SLIRP-202ENST00000553981 A0A1W2PNM2 257 aa1.42□□□□□ -2.18
SLIRP-202ENST00000553981 ZNF815PA8K554 130 aa1.42□□□□□ -2.18
SLIRP-202ENST00000553981 FAM236CP0DP71 79 aa1.42□□□□□ -2.18
SLIRP-202ENST00000553981 PLNP26678 52 aa1.42□□□□□ -2.18
SLIRP-202ENST00000553981 HINT1P49773 126 aaPredicted RBP1.42□□□□□ -2.18
SLIRP-202ENST00000553981 OCIAD2Q56VL3 154 aa1.42□□□□□ -2.18
SLIRP-202ENST00000553981 LINC01545Q5VT33 79 aa1.42□□□□□ -2.18
SLIRP-202ENST00000553981 Q6ZQY7 126 aa1.42□□□□□ -2.18
SLIRP-202ENST00000553981 CLEC2BQ92478 149 aa1.42□□□□□ -2.18
SLIRP-202ENST00000553981 HSPB8Q9UJY1 196 aa1.42□□□□□ -2.18
SLIRP-202ENST00000553981 A6NDN8 102 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms