RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 SYS1-DBNDD2H3BUS1 97 aa7.2□□□□□ -1.26
NEDD1-205ENST00000553609 TRBV7-7A0A0K0K1E9 115 aa7.19□□□□□ -1.26
NEDD1-205ENST00000553609 MT1FP04733 61 aa7.19□□□□□ -1.26
NEDD1-205ENST00000553609 LINC01545Q5VT33 79 aa7.19□□□□□ -1.26
NEDD1-205ENST00000553609 A4D1N5 150 aa7.18□□□□□ -1.26
NEDD1-205ENST00000553609 KRTAP9-3Q9BYQ3 159 aa7.18□□□□□ -1.26
NEDD1-205ENST00000553609 A6NDN8 102 aa7.17□□□□□ -1.26
NEDD1-205ENST00000553609 IGFL1Q6UW32 110 aa7.17□□□□□ -1.26
NEDD1-205ENST00000553609 SMIM11BQ8TCY0 68 aa7.16□□□□□ -1.26
NEDD1-205ENST00000553609 CLEC2BQ92478 149 aa7.16□□□□□ -1.26
NEDD1-205ENST00000553609 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
NEDD1-205ENST00000553609 NHP2Q9NX24 153 aaKnown RBP7.16□□□□□ -1.26
NEDD1-205ENST00000553609 F8WEM9 126 aa7.15□□□□□ -1.26
NEDD1-205ENST00000553609 Q6JHZ5 121 aa7.15□□□□□ -1.26
NEDD1-205ENST00000553609 A8MUU9 505 aa7.13□□□□□ -1.27
NEDD1-205ENST00000553609 IFITM1P13164 125 aa7.13□□□□□ -1.27
NEDD1-205ENST00000553609 Q96NJ1 140 aa7.13□□□□□ -1.27
NEDD1-205ENST00000553609 TMEM238LA0A1B0GVL6 79 aa7.12□□□□□ -1.27
NEDD1-205ENST00000553609 LCE4AQ5TA78 99 aa7.12□□□□□ -1.27
NEDD1-205ENST00000553609 PET117Q6UWS5 81 aa7.12□□□□□ -1.27
NEDD1-205ENST00000553609 SCGB1D4Q6XE38 83 aa7.12□□□□□ -1.27
NEDD1-205ENST00000553609 MACF1Q9UPN3 7388 aaKnown RBP7.11□□□□□ -1.27
NEDD1-205ENST00000553609 COLCA2A8K830 154 aa7.11□□□□□ -1.27
NEDD1-205ENST00000553609 LINC00575Q6W349 94 aa7.11□□□□□ -1.27
NEDD1-205ENST00000553609 MUSTN1Q8IVN3 82 aa7.11□□□□□ -1.27
NEDD1-205ENST00000553609 SYNE2Q8WXH0 6885 aaKnown RBP7.1□□□□□ -1.27
NEDD1-205ENST00000553609 OCIAD2Q56VL3 154 aa7.1□□□□□ -1.27
NEDD1-205ENST00000553609 Q6ZQY7 126 aa7.1□□□□□ -1.27
NEDD1-205ENST00000553609 Q6ZVH6 145 aa7.1□□□□□ -1.27
NEDD1-205ENST00000553609 COPS9Q8WXC6 57 aa7.1□□□□□ -1.27
NEDD1-205ENST00000553609 TRBV20-1A0A075B6N2 111 aa7.09□□□□□ -1.27
NEDD1-205ENST00000553609 TRAV13-2A0A0B4J235 113 aa7.09□□□□□ -1.27
NEDD1-205ENST00000553609 ANKRD39Q53RE8 183 aa7.09□□□□□ -1.27
NEDD1-205ENST00000553609 KRTAP4-2Q9BYR5 136 aa7.09□□□□□ -1.27
NEDD1-205ENST00000553609 LST1O00453 97 aa7.08□□□□□ -1.28
NEDD1-205ENST00000553609 KRTAP16-1A8MUX0 517 aa7.07□□□□□ -1.28
NEDD1-205ENST00000553609 C3orf79P0CE67 100 aa7.07□□□□□ -1.28
NEDD1-205ENST00000553609 KRTAP10-10P60014 251 aa7.07□□□□□ -1.28
NEDD1-205ENST00000553609 HIST1H2BKO60814 126 aa7.06□□□□□ -1.28
NEDD1-205ENST00000553609 HIST1H2BJP06899 126 aa7.06□□□□□ -1.28
NEDD1-205ENST00000553609 HIST1H2BOP23527 126 aa7.06□□□□□ -1.28
NEDD1-205ENST00000553609 HIST1H2BBP33778 126 aa7.06□□□□□ -1.28
NEDD1-205ENST00000553609 HIST1H2BDP58876 126 aa7.06□□□□□ -1.28
NEDD1-205ENST00000553609 HIST1H2BCP62807 126 aa7.06□□□□□ -1.28
NEDD1-205ENST00000553609 HIST2H2BEQ16778 126 aa7.06□□□□□ -1.28
NEDD1-205ENST00000553609 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.06□□□□□ -1.28
NEDD1-205ENST00000553609 SLC7A5P1Q8MH63 180 aa7.06□□□□□ -1.28
NEDD1-205ENST00000553609 MPLKIPQ8TAP9 179 aa7.06□□□□□ -1.28
NEDD1-205ENST00000553609 HIST1H2BHQ93079 126 aa7.06□□□□□ -1.28
NEDD1-205ENST00000553609 HIST1H2BNQ99877 126 aa7.06□□□□□ -1.28
NEDD1-205ENST00000553609 HIST1H2BMQ99879 126 aa7.06□□□□□ -1.28
NEDD1-205ENST00000553609 hADV29S1A0JD25 119 aa7.05□□□□□ -1.28
NEDD1-205ENST00000553609 H3BUT2 72 aa7.03□□□□□ -1.28
NEDD1-205ENST00000553609 VAMP3Q15836 100 aa7.03□□□□□ -1.28
NEDD1-205ENST00000553609 KRTAP19-6Q3LI70 58 aa7.03□□□□□ -1.28
NEDD1-205ENST00000553609 HRES1P13985 223 aa7.01□□□□□ -1.29
NEDD1-205ENST00000553609 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.01□□□□□ -1.29
NEDD1-205ENST00000553609 PPDPFLQ8WWR9 84 aa7□□□□□ -1.29
NEDD1-205ENST00000553609 KRTAP4-11Q9BYQ6 195 aa7□□□□□ -1.29
NEDD1-205ENST00000553609 FAM236DA0A1B0GTK5 79 aa6.99□□□□□ -1.29
NEDD1-205ENST00000553609 FAM236CP0DP71 79 aa6.99□□□□□ -1.29
NEDD1-205ENST00000553609 DSCR10P59022 87 aa6.99□□□□□ -1.29
NEDD1-205ENST00000553609 KRTDAPP60985 99 aa6.99□□□□□ -1.29
NEDD1-205ENST00000553609 SS18L2Q9UHA2 77 aa6.99□□□□□ -1.29
NEDD1-205ENST00000553609 ATOH7Q8N100 152 aa6.98□□□□□ -1.29
NEDD1-205ENST00000553609 SNHG12Q9BXW3 62 aa6.96□□□□□ -1.3
NEDD1-205ENST00000553609 SCGB1D1O95968 90 aa6.95□□□□□ -1.3
NEDD1-205ENST00000553609 A0A087WSZ3 146 aa6.94□□□□□ -1.3
NEDD1-205ENST00000553609 COA6Q5JTJ3 125 aaKnown RBP6.94□□□□□ -1.3
NEDD1-205ENST00000553609 TEN1Q86WV5 123 aa6.94□□□□□ -1.3
NEDD1-205ENST00000553609 KRTAP6-3Q3LI67 103 aa6.93□□□□□ -1.3
NEDD1-205ENST00000553609 NOTCH2NLQ7Z3S9 236 aa6.93□□□□□ -1.3
NEDD1-205ENST00000553609 LINC00846Q9NV44 126 aa6.93□□□□□ -1.3
NEDD1-205ENST00000553609 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
NEDD1-205ENST00000553609 H3BS24 57 aa6.9□□□□□ -1.3
NEDD1-205ENST00000553609 BVES-AS1Q5T3Y7 98 aa6.9□□□□□ -1.3
NEDD1-205ENST00000553609 LCE5AQ5TCM9 118 aa6.88□□□□□ -1.31
NEDD1-205ENST00000553609 SIGMAR1Q99720 223 aa6.88□□□□□ -1.31
NEDD1-205ENST00000553609 NDUFV3P56181 108 aaKnown RBP6.87□□□□□ -1.31
NEDD1-205ENST00000553609 LINC00313P59037 77 aa6.87□□□□□ -1.31
NEDD1-205ENST00000553609 C12orf57Q99622 126 aa6.87□□□□□ -1.31
NEDD1-205ENST00000553609 A0A1W2PNM2 257 aa6.85□□□□□ -1.31
NEDD1-205ENST00000553609 SNRPEP62304 92 aaKnown RBP6.85□□□□□ -1.31
NEDD1-205ENST00000553609 FAM218AQ96MZ4 157 aa6.84□□□□□ -1.31
NEDD1-205ENST00000553609 H3BMG7 143 aa6.81□□□□□ -1.32
NEDD1-205ENST00000553609 IGKV4-1P06312 121 aa6.81□□□□□ -1.32
NEDD1-205ENST00000553609 LINC00472Q9H8W2 130 aa6.78□□□□□ -1.32
NEDD1-205ENST00000553609 A8MWP4 228 aa6.77□□□□□ -1.33
NEDD1-205ENST00000553609 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.33
NEDD1-205ENST00000553609 H0YGX0 51 aa6.76□□□□□ -1.33
NEDD1-205ENST00000553609 DEFB116Q30KQ4 102 aa6.76□□□□□ -1.33
NEDD1-205ENST00000553609 MTURNQ8N3F0 131 aa6.76□□□□□ -1.33
NEDD1-205ENST00000553609 HIST1H4GQ99525 98 aa6.76□□□□□ -1.33
NEDD1-205ENST00000553609 NEBP20929 6669 aa6.74□□□□□ -1.33
NEDD1-205ENST00000553609 MUC12Q9UKN1 5478 aa6.74□□□□□ -1.33
NEDD1-205ENST00000553609 IGHV6-1A0A0B4J1U7 121 aa6.74□□□□□ -1.33
NEDD1-205ENST00000553609 TRBV7-4A0A0J9YYF1 115 aa6.74□□□□□ -1.33
NEDD1-205ENST00000553609 FABP2P12104 132 aa6.73□□□□□ -1.33
NEDD1-205ENST00000553609 SPINK7P58062 85 aa6.73□□□□□ -1.33
NEDD1-205ENST00000553609 HSBP1L1C9JCN9 74 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms